Pinq024455.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:49679948-49689380[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 0.0018 0.11 13.9 0.5 1 23 12 34 12 34 0.97
2 41 0.035 2.2 9.9 2.9 3 23 42 62 40 62 0.97
3 41 1.8 1.1e+02 4.5 3.8 1 23 68 90 68 90 0.97
4 41 0.0047 0.29 12.6 0.4 1 23 96 118 96 118 0.97
5 41 1.8e-05 0.0011 20.2 3.7 1 23 124 146 124 146 0.98
6 41 2.8e-05 0.0017 19.6 1.5 2 23 177 198 176 198 0.97
7 41 0.52 32 6.2 6.5 1 23 204 226 204 226 0.97
8 41 0.012 0.73 11.4 1.6 1 23 232 254 232 254 0.97
9 41 0.0053 0.33 12.4 0.2 3 23 262 282 260 282 0.97
10 41 0.059 3.7 9.2 2.8 3 23 290 310 288 310 0.98
11 41 0.028 1.8 10.1 3.1 1 23 316 338 316 338 0.96
12 41 0.0025 0.15 13.5 0.3 1 23 344 366 344 366 0.99
13 41 0.052 3.3 9.3 5.5 1 23 372 394 372 394 0.98
14 41 3.6 2.2e+02 3.5 6.1 3 23 402 422 402 422 0.98
15 41 0.011 0.71 11.4 2.3 1 23 428 450 428 450 0.97
16 41 0.0068 0.43 12.1 3.2 2 23 457 478 456 478 0.96
17 41 0.19 12 7.6 4.1 1 23 484 506 484 506 0.96
18 41 0.00082 0.052 15.0 1.1 1 23 526 548 526 548 0.98
19 41 7.6e-05 0.0047 18.2 1.0 1 23 582 604 582 604 0.98
20 41 0.0086 0.54 11.8 4.4 3 23 612 632 610 632 0.98
21 41 0.011 0.71 11.4 2.6 1 23 638 660 638 660 0.97
22 41 0.015 0.92 11.0 0.9 1 23 666 688 666 688 0.98
23 41 0.042 2.6 9.6 0.6 1 23 694 716 694 716 0.97
24 41 0.084 5.3 8.7 3.7 3 23 724 744 722 744 0.97
25 41 0.0001 0.0065 17.8 0.6 1 23 775 797 775 797 0.98
26 41 0.015 0.96 11.0 2.0 2 23 804 825 803 825 0.96
27 41 1.1 70 5.1 3.6 1 23 831 853 831 853 0.97
28 41 8.5 5.3e+02 2.3 1.4 3 23 861 881 859 881 0.95
29 41 0.0029 0.18 13.2 2.7 1 23 887 909 887 909 0.97
30 41 0.026 1.6 10.3 1.5 3 23 917 937 915 937 0.97
31 41 0.0036 0.23 13.0 3.6 1 23 943 965 943 965 0.98
32 41 4.6 2.9e+02 3.2 1.3 1 23 971 993 971 993 0.97
33 41 0.0028 0.17 13.3 1.2 1 23 999 1021 999 1021 0.97
34 41 0.034 2.1 9.9 6.1 1 23 1027 1049 1027 1049 0.98
35 41 0.001 0.064 14.7 2.0 1 23 1055 1077 1055 1077 0.98
36 41 0.13 8 8.1 4.2 2 23 1084 1105 1083 1105 0.95
37 41 0.012 0.75 11.3 2.2 1 23 1111 1133 1111 1133 0.98
38 41 0.11 7.2 8.2 1.2 3 23 1141 1161 1139 1161 0.97
39 41 0.0022 0.14 13.7 4.2 1 23 1167 1189 1167 1189 0.98
40 41 0.028 1.7 10.2 0.2 3 23 1197 1217 1195 1217 0.97
41 41 0.00016 0.01 17.2 3.3 1 23 1223 1245 1223 1245 0.98

Sequence Information

Coding Sequence
ATGCACCtgctaacgcacaccgacgagaagccgttcttCTGCGGTCTTTGCGACAATAAATTCCGACGGATCGACCAGCTGAAAGGACACATGTTAATACACACgagcgagaagccgttcggctgCGATGTCTGCGGTCACAAAAGCCGGCGGCTCAATGATTTGAAGaagcacaagttaaagcacaccggcgagaagccgttcagttgcgatctgtgcgattataaatgccgatgGGTCACAAACCTGAAAACGCACAAGCTcaagcacaccgacgagaagccgttcttttgtggtctttgcgattatagatgCCGACAGGCTGGAGTTTTGAACGCGCACATGATAATACACACAGACAAAAATCCGTTCAGCTGCAGTATTTGTGATTATAAGTGCCGGAAATCCGGAAACTTGAAAAGACACATGATAACACACGCCAGCCCGAAACCGTTCAATTCAAATGCCAGAGCTTTGAAAGGatACCTAGAGGTCCCGGGGACCGAAACTGAAAACGAAAACCAAGTCGAATGTCGAATATGTAACGCCACATTTAAAAACCATTCAAATTTACGCGCGCACATCTTCACGCACACAGGCGAGAAGACGTTCAGTTGTaatctctgcgattacaaatgcggACACGTCGGACACCTAAACCAGCACAAGCTACgccacaccgacgagaaaccgttcagctgcgccctttgcgattacaaatgccgggAACCTAATAAACTCAAGAGGCACGTCTTAAtccacaccgacgagaagccgttcggctgCGACCTCTGCGAATATAGATCTCGGCAAGCCTCGGGATTGAAAACGCAcatgttaatacacaccggcgagaagccgttcggctgTGATCTTTGCAGTTATAAATGTCGCAGTATCGGAGACCTGAAAAGGCACAAGCAAAcgcacaccgatgagaagccgttcagctgtaattcctgcgattataaatgccgaaagGCCGCGACCTTAAGACGGCACAActtaatacacaccgacgagaagccgttccgttgtgatctttgcgattataaaggcCGACAGGTTTCAGTTTTGAAAGCCCACATGTTAACGCAcacgggcgagaagccgttcagctgtgatAGGTGCAGTTATAAATGCCGGAAGGCCAATGACTTGAAAAGGCACAGGTTGAAGCACACCGACAAGAAGCCGCTCGGctgtgacctctgcgattataagtgtcgGGAAGTCAAACATTTGAAAcagcacaagttaaagcacgcCGTCGAGAAACCGTTTgcttgtgatctttgcgacTACAAATGTCGATACGATAGATCCTTGAGGACGCACATGTTGATACACGCGGACGAGAAGCCGTTGAGTTGTAATctctgcgattttaaatgccggGTCGCCTCGAGCCTGAAACGgcacaagttaacgcacacagacgagaagccgttctgctgcgatctttgcgattataaatgccgggaAGCTATTTCCTTGAAGAGGCACGGGTTGAGACACATTAACGAGAAGCGGTGTCAACGGATTCCGGGAGCCAAAACTTCGAACGAGAAAACATTCGAATGTCGAATATGCAACTCTAAACTTAAAAGGCGTTCAAATTTACGCGCACATGTTCTCAGGCATGTTGGTGGgaagccgttcagctgtgatctttgcgattataaatgctgGGCGTCCAAAATATTACAGAGGCACGTgttaacacacaccggcgagaagcccttCAGTTGCGATATTTGCGAATACAAAAGTCGGCAAGCTTCGACCCTAAAAACGCACATgttaacgcacaccggcgagaaaccctTCGGTTGCGATctgtgcgattacaaatgccggaCGTCTAGCCGTTTGAAAAAGCACAGGTTAACGCACACCAAGGAGAAGCCATTCgcctgtgatctttgcgattataaatgcagaAAAGCCAATGCTTTACAAAAGCACAAATTAAGGCACACAGTTGAGAAACCCTACAGCTGCGATGTTTGCGGTTATAAATGCCGTGTCGCCGCTCGCTTAGAAATGCATAAGCTAACGCACACCGATGAGAGGCCGTTCTTTTGTGGTCTTTGCGATGATAAATTCCGAGGAATTAAACAACTGAAAACTCACATGCTAATACACACAAACGAGAAGCCGTTTGGTTGTGatctttgcagttataagtGCCGACGATCCACGGAGTTGCAGCAGCACAAGTTAAGACACgccgatgagaagccgttcaccTGTGATCTGTGTGATTACAAATGCCGCAAGGCCCGaatttcGGGAGCCAAAACCGCAAACGCAAAAACATTCGAATGTCGGATATGTAACGCTAAACTTAAAAGGCGATCAAGTTTACGCGCGCACATTCTCACGCATACCGGTGAGAAGCcactcagttgtgatctttgcgattacaaatgccgacaaGTCGGAAGCTTGAAGCTCCACCAGCTGAAGCACACCGACgaaaagccgttcagttgtgacctttgcggtTTTAAATGCCGGGCATCTAAAATACTGAAGAGGCACAAGCTGACGCACacggacgagaagccgttcggctgcgcgctttgcgattataaatgccgggcGTCTAAGATATTGCAGAGGCACGagttaacgcacaccggcgagaagccgttcagttgcgatgtTTGCGAATACAAATGTCGGCAAGCGTCGACCTTAAAAACGCACAAGTTAATACATacgggcgagaagccgttcggttgtgatctctgcggTTATAAATGCCGGGCATCTGGGGATTTGAAGAGGCACAAGGTAACGCACACCGaggagaaaccgttcagttgtgaccgttgcgattacaaatgtcgaAAAGCCAATGATTTAAAAAAGCATGTGCTAACGCACACCGAGGAGAAACCCTACAGTTGTGATgcttgcgattataagtgccggcTCGTCGCCCGCTTAGAAATGCACAAGCTAACACACACCGATGAGAGGCCGTTCTTTTGTGGTctttgcaattataaattccgaGGGATCAGACAACTGAAAACTCACATGTTAATACACACGAGCGAGAAACCGTTTCGTTGCGATCTTTGCAGTTTCAAGTGCCGACAATCGACGCAGTTGAAGCAGCAcaagttaacacacaccgatgagaagccgttcagttgtgatatctgcgattacaaatgccggaAGGCCGGATACTTGAAAGGGCACATGTTAAGACACACAAGCGAGAAGCCACTCAgttgcgacctttgcgattataagtgccgacaATTCACACAGCTGAAACAGCACAAGTTAAATCACACCGATGAAAAGCCGTTTCGCTGTGAtttctgcgattataaatgccggatGGTTGGCCTCTTGAAAAGTCACATGTTAATACATTCGGgggagaagccgttcggttgtggcTTTTGCGACTTTAAATGTCGCCGGGCGGGAGGCTTGAGAGAGCACGAgctaacacacaccgacgagaagccgttcagttgtgatctgtgcgattataaatgccgattATCCAAAGATTTGAGAAAGCACATGTTAAAGCATAAcgatgagaagccgttcggttgtgacctctgcgattatagaGGCCGACGGGTCGCGAATCTGAAAGCGCACAGGTTATCACACACCgttgagaagccgttcagttgtgaactttgcgattataaatgccgaaacGCTTCAGATTTGAGACGGCACAAGTTAACACACGCCGATTAG
Protein Sequence
MHLLTHTDEKPFFCGLCDNKFRRIDQLKGHMLIHTSEKPFGCDVCGHKSRRLNDLKKHKLKHTGEKPFSCDLCDYKCRWVTNLKTHKLKHTDEKPFFCGLCDYRCRQAGVLNAHMIIHTDKNPFSCSICDYKCRKSGNLKRHMITHASPKPFNSNARALKGYLEVPGTETENENQVECRICNATFKNHSNLRAHIFTHTGEKTFSCNLCDYKCGHVGHLNQHKLRHTDEKPFSCALCDYKCREPNKLKRHVLIHTDEKPFGCDLCEYRSRQASGLKTHMLIHTGEKPFGCDLCSYKCRSIGDLKRHKQTHTDEKPFSCNSCDYKCRKAATLRRHNLIHTDEKPFRCDLCDYKGRQVSVLKAHMLTHTGEKPFSCDRCSYKCRKANDLKRHRLKHTDKKPLGCDLCDYKCREVKHLKQHKLKHAVEKPFACDLCDYKCRYDRSLRTHMLIHADEKPLSCNLCDFKCRVASSLKRHKLTHTDEKPFCCDLCDYKCREAISLKRHGLRHINEKRCQRIPGAKTSNEKTFECRICNSKLKRRSNLRAHVLRHVGGKPFSCDLCDYKCWASKILQRHVLTHTGEKPFSCDICEYKSRQASTLKTHMLTHTGEKPFGCDLCDYKCRTSSRLKKHRLTHTKEKPFACDLCDYKCRKANALQKHKLRHTVEKPYSCDVCGYKCRVAARLEMHKLTHTDERPFFCGLCDDKFRGIKQLKTHMLIHTNEKPFGCDLCSYKCRRSTELQQHKLRHADEKPFTCDLCDYKCRKARISGAKTANAKTFECRICNAKLKRRSSLRAHILTHTGEKPLSCDLCDYKCRQVGSLKLHQLKHTDEKPFSCDLCGFKCRASKILKRHKLTHTDEKPFGCALCDYKCRASKILQRHELTHTGEKPFSCDVCEYKCRQASTLKTHKLIHTGEKPFGCDLCGYKCRASGDLKRHKVTHTEEKPFSCDRCDYKCRKANDLKKHVLTHTEEKPYSCDACDYKCRLVARLEMHKLTHTDERPFFCGLCNYKFRGIRQLKTHMLIHTSEKPFRCDLCSFKCRQSTQLKQHKLTHTDEKPFSCDICDYKCRKAGYLKGHMLRHTSEKPLSCDLCDYKCRQFTQLKQHKLNHTDEKPFRCDFCDYKCRMVGLLKSHMLIHSGEKPFGCGFCDFKCRRAGGLREHELTHTDEKPFSCDLCDYKCRLSKDLRKHMLKHNDEKPFGCDLCDYRGRRVANLKAHRLSHTVEKPFSCELCDYKCRNASDLRRHKLTHAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01258842;
90% Identity
iTF_01258842;
80% Identity
iTF_01258842;