Pcoq017857.1
Basic Information
- Insect
- Proctacanthus coquilletti
- Gene Symbol
- ARID5B
- Assembly
- GCA_001932985.1
- Location
- MNCL01000004.1:1736871-1792594[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-14 1.9e-10 41.6 0.4 2 89 432 512 431 512 0.88 2 2 4.6 1.5e+04 -3.0 0.0 25 44 531 550 517 588 0.61
Sequence Information
- Coding Sequence
- ATGGAAATTAAGgTGGTGGGAGGACCTTGTGGATTCCATGGCTCATACACATTCTACAAAGGTTTACAGATAACACCAGCAGGTGGTGGCTGCATAAATACACAACTTAATAAGAACTATATTAATCAGTATAGCACGCCATTGAATGCCACAAATCCAAAATGTAAGCCCGCCACGAGAAAGTGTGTCGTGGATAAGAGGACAGATCTGGGTGATCCCTCCCAGCCAAATGGATTTTATAAGCCTCTGGTATTGGCTCTGGGCGATTGCATTCCAGTGCGACCATGGTCAGATTCACCGATTGCCTGCCTAGCTGAAATTCGCATGATTTGGCGGGACAAAAGTGAACCGTCCTTGTTAACTGGATTgagattgtattttttaccAGAGAACACTCCAAACGGACGAAATTGTCATGGAGAGgACGAAGTTGTGGCTATTTCGGACAAAGTTGTGATACGTGCTGAAGATCTGCTGAATTGGTTCGACGATAACATAGAATGGAACTATGGTTTGACTTGGAGGAATGCACACGATTCCACAAGAGGACGGTACTATAACAGGAATGtcttaaattcagcggattcagCAGGTCGAACGGTGTCGCTGAAGAATTCCCAGATCGATTTCACAGatgtagaaaaagaaaaacttctaggAGATAATCGAACGAAGATTGCTGTATTAAGCTACCCAAGATACTGCCGCTATAGAGCAACTATGAAGCGCCTTGAAGAGGATGACTATGACGACTGGctaagaaattcaataatagCTGCATTATGTGGTTTTTCGTCACCATCCTGCGATATGCGAGTAATGTTCTGCAGAGATACATTTGATTATCCAGAATTAGAAACCCATGAGCTTCTCTGTAATCATCTAGCCCCGAAATTGAAGGGTCGACCTCGGGgaaggaaaaagaaatcacGATCAGAGTCACCATTTAATTTAGGTGGAAAAACGAAAGCAATGGACTCTGGGAGTGAATCAAATGAGTcagatatttcaatattttcaataggCAAGaataatACCGTAAAAATTCAGCCACGGCCACATTTACGATTTAATCACAGACCTGCTAGAGGAAAAGTAAAATCTGAGTCGGATTACAAGCCACCGAAGAagatggaaattaaaaaggagGATGAAAAGGACAATTTCGTTATGGATAAGAAAGCTAAGGACTTAACGGGGAAGAAGACCCCGGAGAAGAAGCCCAAGTGTACTACTATtactgaaaaatcaaattctctAAACAAGCCGACATGCAGCAACTGCCCTCCTGAAGAAAAGTTCTTCTTAAGGAAACTTCATGAATTCCACATCAAGCAGAAGAATCACATACCAAAGATGATTTGGGTGAGTTTGAAAGGGGTACACCTGTACGCGATATTCTGCCAGGTGAAGAAGCTGGGTGGATACGAAGCTGTAACGCTGAAGAAGCAATGGAAGACGCTGTTCGGAGAGAGCAGTTCTTTGCACCACACGATCacacgaaaaaaatatgaacgtaTATTGCTGCCTCTAGAAAGATCTGAGTTGGTTAAGAAGCCAAAATCAGACGTGAAGAAGGAACCTTCTTCGGAAGTTGAAGACAAACCGCTAAAAGTTCCTAGCTTGAAAGTAACAATTAAGAAAGAGAGGAGTCCTGAACTGGATTGTAAATCAGAACCGGAAATAACTAAAGAAGAAATGGATGTGATTCAAAAGAAAGTTAAGGCTAAGCAAGCGGCTCAAGAGGCTGCTAGTGCTTTTAATGAAGACATCAAACCATTGACTGAGAAACCTATTCTAACGATACCAGTTGTATCGACTGCAGAGTCGAAGATTTCAGTATCGTCCAATACAGTCCAACCTGTCTCCGTTCCAGTAACTGTTATCGTGGGAACTCCAGATCCTCCTAAAGGGACAGTCTCTGAAGAGGACATAAAGCCGGTGATAAATTCTTCATCTGGATCCTCGAAATCATCGTCGTCACAAAAAATTGAGATCCAACAACCGCATACGACGATTACAGTTCACCAGACTACAATTCATCCTCAGACGCATTCCAAGATAACGACGACCCAAAATCAGATCACCAACCAAATCCAAATCACTAATCAGATCCAGATTCAACAGATTACCGTGCAACCGAATCAAAATGATTCTTCTGTCTCTGGGTGTATGAACGGAGAGTTCAGGTGTAATATTAAGCAGGACAAGGATGGACAGGAGGTCAAAATCGAGAACCGTGACGGTGCTAGTCCTAAGTACAGGGGTGACGCAAGTCCGGTTTGGCAAAATGTTCGAGTAAAGACTGAAAAAATCCCTTATGAAAAAGAGAATATTCCCTTTATAGCAGCTGGTACGACAATTACACCTGTGATATCTCAAGTGTCTGTCCCGAAAAAATCACCGGAGGTCATTGATCTGGTGGATAGCGACGGAGATGGTTCAACGTCTTCGGCAAGCTCCTCTCTAGCGAATCAAGTTAGGCAAAACTGCACGACAGGTAGTACAATTGTACCACCTGTGAAAAAGAGGAAACTGGACATCCTCCGTGAAGGAGGTCTTGAAGTAACTGCCATTAGTAATACCCATGGCGTGATTTCGACGTCTGGGTCAGTGCCGCCCGTTTCATTACGAATTCCATCACATTTGtctttaaaatctgaaaaccGATTGTCCGCGGATGATAAATTCAACCTGCCTCCATCGACCAGTATCACCATTCCGAGTAATGGTATAAACAGCGCCGTACCTAAAATACCTGCTAGTAGTATGTATACGAAGACGGGCAAGATATTCGGAAATCCGAAGGATATTTTGCCTCCGACTCCTAAACCTTGTGGACCCTGTGAAGTCCTGGACCTCACTGTTAAGTCACCGTTGAAATTTCCAGCTTTAGAAATTCATCCGATACCATCAGCGCGTCATGCGAGGTCACCGCCCCAAAGTAAGCCAACAGTGTCTGCAATAAATCTTTCTAATTCTAAACCCAAATTAGCTGATAATGGATTACAAATAACGTTAGTACCTTCGAATCCGCCACCTCCTAAGAATCCTAACCATCATACCCAGAGTGTTTATAATGCCCAGAATCACAATATCAAGCGGAAGGCGGTTGATATCATGCCGATGCCGGTAGTACCTCCGCAGGTGCCGCGACCGATTCAGAAACAATCACCTGTACCAAAGGCGGAGAAAAGGGCGACCAGCACCTCACCCCCGCAGTCGTCGCCGAAACCTGCGGTACCTCCATCGAATGCTCAAGGTTCAAAAGCGCCGGCATTTCCTTTCCCACCATTTCTGCCCCATTTGGCTGCTGCTGCACCGAATCCCTTTCTTCCCATGTTGAATCCTGTCCTCCTGTCCAGTTTATACGCCCAGACGCCGAACCTCTTCTTACCCAACCAAATCCCACAGGAGCTCCTTCAGCTCTACAAGAACCTACCGTCTGAAATGGGGGTCGTACCCATTTCGAAGAGCTAA
- Protein Sequence
- MEIKVVGGPCGFHGSYTFYKGLQITPAGGGCINTQLNKNYINQYSTPLNATNPKCKPATRKCVVDKRTDLGDPSQPNGFYKPLVLALGDCIPVRPWSDSPIACLAEIRMIWRDKSEPSLLTGLRLYFLPENTPNGRNCHGEDEVVAISDKVVIRAEDLLNWFDDNIEWNYGLTWRNAHDSTRGRYYNRNVLNSADSAGRTVSLKNSQIDFTDVEKEKLLGDNRTKIAVLSYPRYCRYRATMKRLEEDDYDDWLRNSIIAALCGFSSPSCDMRVMFCRDTFDYPELETHELLCNHLAPKLKGRPRGRKKKSRSESPFNLGGKTKAMDSGSESNESDISIFSIGKNNTVKIQPRPHLRFNHRPARGKVKSESDYKPPKKMEIKKEDEKDNFVMDKKAKDLTGKKTPEKKPKCTTITEKSNSLNKPTCSNCPPEEKFFLRKLHEFHIKQKNHIPKMIWVSLKGVHLYAIFCQVKKLGGYEAVTLKKQWKTLFGESSSLHHTITRKKYERILLPLERSELVKKPKSDVKKEPSSEVEDKPLKVPSLKVTIKKERSPELDCKSEPEITKEEMDVIQKKVKAKQAAQEAASAFNEDIKPLTEKPILTIPVVSTAESKISVSSNTVQPVSVPVTVIVGTPDPPKGTVSEEDIKPVINSSSGSSKSSSSQKIEIQQPHTTITVHQTTIHPQTHSKITTTQNQITNQIQITNQIQIQQITVQPNQNDSSVSGCMNGEFRCNIKQDKDGQEVKIENRDGASPKYRGDASPVWQNVRVKTEKIPYEKENIPFIAAGTTITPVISQVSVPKKSPEVIDLVDSDGDGSTSSASSSLANQVRQNCTTGSTIVPPVKKRKLDILREGGLEVTAISNTHGVISTSGSVPPVSLRIPSHLSLKSENRLSADDKFNLPPSTSITIPSNGINSAVPKIPASSMYTKTGKIFGNPKDILPPTPKPCGPCEVLDLTVKSPLKFPALEIHPIPSARHARSPPQSKPTVSAINLSNSKPKLADNGLQITLVPSNPPPPKNPNHHTQSVYNAQNHNIKRKAVDIMPMPVVPPQVPRPIQKQSPVPKAEKRATSTSPPQSSPKPAVPPSNAQGSKAPAFPFPPFLPHLAAAAPNPFLPMLNPVLLSSLYAQTPNLFLPNQIPQELLQLYKNLPSEMGVVPISKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00628010; iTF_00717518; iTF_01183599; iTF_00936340; iTF_00937050; iTF_01460926; iTF_01049437;
- 90% Identity
- -
- 80% Identity
- -