Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963920795.1
Location
OY987205.1:3648903-3668935[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-13 5.6e-10 40.6 0.3 2 89 582 662 581 662 0.88

Sequence Information

Coding Sequence
ATGCATATCGCGGGCAGGTGCGTCGCGAGCCGCACGAAAGCAACATTACTGCCCCAGAGATTGCCAATTTACGTGGCTCAGGTGATTAATAGCAGTCGAGAGCAAACTCCGGCATTAGCTGCCTTGAACTGCGCCAAGTGCAATTTTCTTATAGATTTAAGGAgcccgtcgtcgtcgtcgtctccTCCGCCCACTTTAACGGCTGTTCCGCGAGTCGAAGCGCACCACCAGCAGCTTTTTTACGCGCGCCAATTTGTTCTAGTTCATCGCCGGCCAGCGGTAGATTGCGGGTTTTTGAAATGGATCCGCCGCTGTTGGGGCTCCTTCTCCGGGCACAGCCTCCTCATCTGTGAACCTCAAAATGTGGGGCTCCACTGTGCGGTCGGGTGCCCCCTTCCGAGTTCTTCTGTGGGCCGTGGCGGGAGGGCTCGACGTTGCCAGAATTTAAGCGCTTCTAGAGAAGAGCTTAATGCGgTGGTGGGAGGACCTTGCGGATTCCATGGCTCGTACACATTCTACAAAGGTTTGCAGATAACACCAACGGGAAGTGCGTGCATAAGTCCACAGTTCAACAAGCAGTTCATAACTCAGTACACGAACTTGCCCCCGTCGAATCCAAAATGTAAGCAGACGAGAAAGTGCGTCGTTGATAAGCGCACTGATTTGAGTGATCCAATCTCCCAGGCAAATGGATTTTATAAGCCTGTGGTGTTGGCTCTGGGCGATTGCATTCCTGTGCGGCCGTGGTCCGATTCACCAATCGCCTGCCTTGCTGAAATTCGAATGATTTGGCGGGACAAAAGTGAGCCTTCGCTGCTCACTGGACTGAGATTGTATTTTTTACCAGAGAACACTCCAATGGGACGAAATTGCCATGGAGAGGATGAAGTTGTTGCTATTTCCGACAAAGTTGTGATACGTGCCGAGGACCTGCTGAATTGGTTCGACGATAACATCGAGTGGAACTATGGACTGACCTGGAAAGGTGGTGACCTATCTGCAAAAAGCAGATTCTACGACATAAATGCCACCCAATCAACAGATCCCAGTAAAACAGtatcaatgaaaaattccCAAATAGATTTCTCGGatgtagaaaaagaaaaactcttAGgaGATCCAAATCGAACAAAAATTGCTGTATTAAGCTACCCGCGATATTGTCGCTATCGAGCGACTATGAAACGCCTTGAAGACGATGACTACGACGATTGgttaaaaaattcgatagTATCAGCATTATGTGGATTTTCGTCACCATCGAACGATATGCGAGTTATGTTCTGTAGAGATACATTCGACTATCCAGAATTGGAAACGCACGAGCTCCTTTGCAATCATTTAGCGCCAAAATTAAAAGGTCGACCTCGaggaagaaaaaagaaatgtcGTTCAGAGTCACCCTTCAATCTTGGcggaaaaacgaaaacaatcGATTCGGGTAGTGAGTCAAATGAATCGgatatttcgatattttcgaTAGGAAAGAGCAGTACAGTCAAAATTCAACCTCGACCGCATCTACGTTTCAACCACAGACCTGCTCGGGGTAAAGTAAAATCAGAATCTGATTATAAGCCaccgaagaaaattgaattgaagaagGAAGATGAAAAGGATGTTTTAGTTGGGGAGAAGAAACCTAAAGATTTATCGGGTAAAAAAACTCCAGAGAAGAAGCCAAAGTTGGCTGAAAAACCAGCTCCTTTAATTAAGCCGATGTGTAACAATTGTCCTCCTGAAGAGAAGTTTTTCTTGAGAAAATTGCATGAGTTCCACATTAAGCAGAAAAACCACATACCAAAGATGATTTGGGTGAGTTTAAAAGGAGTTCACTTATATGCGATATTCTGTCAGGTAAAGAAATTGGGTGGTTATGAGGCTGTTACGTTGAAGAAACAGTGGAAGACACTTTTCGGTGATGCAAGTTCTTTGCATCATACAATAACAAGGCGgaaatatgaaagaattttGCTACCTCTAGAGCGGTCCGAATTGGTTAAAAAGACAACGAAAACTGATATGAAGAAAGAACCTTCTGAAATTGAAGAGAAACAACAACCTTTAAAAGTTCCTAGCTTGAAGGTAACAATTAAGAAAGAGAGGAGTCCTGAACTCGAGTATAAATCTGAATTGGAGTGTAAATCTGAACCGGAAATAACTAAAGAAGAAATGGATGTGATTCAAAAGAAGGTTAAGGCTAAGCAAGCGGCTCAAGAAGCTGCAGCTTCTGTCTTTGATGATATTAAggatattaaagattttaagcCATCGGTGGTTGAAAAACCGATTCTAACGATACCAGTTGTATCTACTGGTGAAAGTAAGATATCTGTTTCTTCAAACACTGTCCAACCAGTATCCGTTCCAGTGACTGTAATTGTTGGTACACCAGAGCCAGGAAAAGGTTCAGTAACTGAGGCGGATATTAAGCCCGTGATAACGTCTTCAACTTCGACATCCACAAAAACGACGGTTGCTACATCATCTTCTCAAAAGATTGAAATACAACAACCACATACAACAATTACTGTTCACCAGACAACCATACATCCTCAGACGCATTCCAAGATAACGACAAGTCAGAATCAAATTACAAATCAAATTCAGATAACGAATCAGATTCAAATTCAGCAGATAACAGTTCAGCCGAATCAAAATGATTCGTCTTCACCTGGATGCAAGAATAGCGAGTTCAGGTGTAATATAAAACAGGATAAAGATGGGCAAGAAGTTAAAATTGAGAATCGTGATAGTGCGAGCCCAAAGTATCGAAGTGATGCCTCAAGTCCAGTTTGGCAAAATGTTCGAGTTAAGACTGAAAAAATTCCTTATGAAAAGGAGAATATTCCCTTTATAGCAGCTGGTACGACAATTACTCCTGTGATATCTCAAGTATCAGTCCCTAAAAAATCGCCGGAGGTTATAGATTTGGTTGATAGTGATGGAGATGGTTCAACATCTTCAGCTAGTTCGTTAGCGAATCAAGTTCGACAAAATTGTACGACAACAACGACGACAACGACAACTGGAAATTCGATTGTTGTACCTCCGGTGAAAAAGAGGAAACTTGATATCCTCCGGGAAGGAGGTCTTGAAGTAACTGCCATTAGTAATACACATGGTGTTATTGCAACTTCCGGTTCCCTGCCTCCTGTTTCGTTACGAATTCCATCGCATCTATCCCTAAAACCCGAAAGGATGTCGGATGATGATAAATTCAACCTGCCCCCATCAACAAGTATCACCATTCCGAGCAATGGTATAAATAGTTCAGCACCGAAAATACCTGCAAGTAGTATGTATACAAAAACGGGTAAAATTTTTGGGAACCCTAAGGATATTTTGCCTCCAGCCCCGAAGCCGTGTGGACCCTGCGAGGTTCTGGACCTTACTGTGAAATCACCCTTAAAATTTCCAGCTTTAGAAATTCATCCGATACCATCAGCGCGTCACGCAAGGTCGCCGCCTCAAAGTAAGCCAACAGTGTCTGCAATTAATTTGTCTAGCTCTAAGCCGAAATTAGCCGATACCGGCCTACAAATAACCTTAGTACCTTCACATCCTTCGCCCCAAAAAAATCTTACCCATAcccaaaatgtttataattcCCAAAATCACAATATTAAGCGAAAAGCAGTCGATATTATGCCTATGCCTGTGGTGCCCCCGACACCACCGCGCCGTGATGTTCAGAGACAATCACCTGCcccaaaagtggaaaaaaggTCAAGCAGTACCTCGCCAACGCAAACCTCACCAAAACCCTCGATGCCCTCGAACCTTTCTGGTTCGAAGGCGCCGGCATTTCCCTTCCCACCGTTCCTGCCCCACTTGGCTGCTGCTACACCGAACCCTTTCCTACCCATGCTGAACCCTGTCCTCCTATCGAGTCTCTACGCTCAGACCCCGAACCTTTTTCTACCCAATCAAATCCCTCAGGAACTCCTTCAACTGTACAAGAACCTTCCAGCCGAAATGGGCGTCGTCCCCATCTCAAAAAGCTAA
Protein Sequence
MHIAGRCVASRTKATLLPQRLPIYVAQVINSSREQTPALAALNCAKCNFLIDLRSPSSSSSPPPTLTAVPRVEAHHQQLFYARQFVLVHRRPAVDCGFLKWIRRCWGSFSGHSLLICEPQNVGLHCAVGCPLPSSSVGRGGRARRCQNLSASREELNAVVGGPCGFHGSYTFYKGLQITPTGSACISPQFNKQFITQYTNLPPSNPKCKQTRKCVVDKRTDLSDPISQANGFYKPVVLALGDCIPVRPWSDSPIACLAEIRMIWRDKSEPSLLTGLRLYFLPENTPMGRNCHGEDEVVAISDKVVIRAEDLLNWFDDNIEWNYGLTWKGGDLSAKSRFYDINATQSTDPSKTVSMKNSQIDFSDVEKEKLLGDPNRTKIAVLSYPRYCRYRATMKRLEDDDYDDWLKNSIVSALCGFSSPSNDMRVMFCRDTFDYPELETHELLCNHLAPKLKGRPRGRKKKCRSESPFNLGGKTKTIDSGSESNESDISIFSIGKSSTVKIQPRPHLRFNHRPARGKVKSESDYKPPKKIELKKEDEKDVLVGEKKPKDLSGKKTPEKKPKLAEKPAPLIKPMCNNCPPEEKFFLRKLHEFHIKQKNHIPKMIWVSLKGVHLYAIFCQVKKLGGYEAVTLKKQWKTLFGDASSLHHTITRRKYERILLPLERSELVKKTTKTDMKKEPSEIEEKQQPLKVPSLKVTIKKERSPELEYKSELECKSEPEITKEEMDVIQKKVKAKQAAQEAAASVFDDIKDIKDFKPSVVEKPILTIPVVSTGESKISVSSNTVQPVSVPVTVIVGTPEPGKGSVTEADIKPVITSSTSTSTKTTVATSSSQKIEIQQPHTTITVHQTTIHPQTHSKITTSQNQITNQIQITNQIQIQQITVQPNQNDSSSPGCKNSEFRCNIKQDKDGQEVKIENRDSASPKYRSDASSPVWQNVRVKTEKIPYEKENIPFIAAGTTITPVISQVSVPKKSPEVIDLVDSDGDGSTSSASSLANQVRQNCTTTTTTTTTGNSIVVPPVKKRKLDILREGGLEVTAISNTHGVIATSGSLPPVSLRIPSHLSLKPERMSDDDKFNLPPSTSITIPSNGINSSAPKIPASSMYTKTGKIFGNPKDILPPAPKPCGPCEVLDLTVKSPLKFPALEIHPIPSARHARSPPQSKPTVSAINLSSSKPKLADTGLQITLVPSHPSPQKNLTHTQNVYNSQNHNIKRKAVDIMPMPVVPPTPPRRDVQRQSPAPKVEKRSSSTSPTQTSPKPSMPSNLSGSKAPAFPFPPFLPHLAAATPNPFLPMLNPVLLSSLYAQTPNLFLPNQIPQELLQLYKNLPAEMGVVPISKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01256193;
80% Identity
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