Basic Information

Insect: Priocnemis perturbator
Gene Symbol: -
Assembly: GCA_963942575.1
Location: OZ012657.1:5690692-5693542[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.021 2.1 9.4 0.2 6 21 12 27 6 28 0.86

2 14 5 5e+02 1.9 0.0 2 20 34 52 33 54 0.87

3 14 3.4 3.4e+02 2.5 0.3 1 12 230 241 230 250 0.88

4 14 0.028 2.8 9.0 1.7 1 20 359 378 359 380 0.94

5 14 0.0002 0.02 15.8 0.3 2 23 385 406 385 406 0.97

6 14 0.00091 0.091 13.7 5.6 1 23 416 438 416 438 0.98

7 14 0.036 3.5 8.7 0.2 1 23 457 478 457 478 0.92

8 14 0.00068 0.067 14.1 0.1 2 23 484 505 483 505 0.95

9 14 4.9e-05 0.0048 17.7 4.8 1 23 531 553 531 553 0.99

10 14 2.1e-06 0.00021 22.0 3.7 1 23 559 581 559 581 0.96

11 14 0.0011 0.11 13.4 3.9 3 23 589 609 587 609 0.97

12 14 1.5e-06 0.00015 22.5 0.8 1 23 615 637 615 637 0.98

13 14 9.3e-05 0.0093 16.8 0.2 1 23 641 663 641 663 0.99

14 14 0.00044 0.043 14.7 0.2 1 23 671 693 671 693 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.021	2.1	9.4	0.2	6	21	12	27	6	28	0.86
2	14	5	5e+02	1.9	0.0	2	20	34	52	33	54	0.87
3	14	3.4	3.4e+02	2.5	0.3	1	12	230	241	230	250	0.88
4	14	0.028	2.8	9.0	1.7	1	20	359	378	359	380	0.94
5	14	0.0002	0.02	15.8	0.3	2	23	385	406	385	406	0.97
6	14	0.00091	0.091	13.7	5.6	1	23	416	438	416	438	0.98
7	14	0.036	3.5	8.7	0.2	1	23	457	478	457	478	0.92
8	14	0.00068	0.067	14.1	0.1	2	23	484	505	483	505	0.95
9	14	4.9e-05	0.0048	17.7	4.8	1	23	531	553	531	553	0.99
10	14	2.1e-06	0.00021	22.0	3.7	1	23	559	581	559	581	0.96
11	14	0.0011	0.11	13.4	3.9	3	23	589	609	587	609	0.97
12	14	1.5e-06	0.00015	22.5	0.8	1	23	615	637	615	637	0.98
13	14	9.3e-05	0.0093	16.8	0.2	1	23	641	663	641	663	0.99
14	14	0.00044	0.043	14.7	0.2	1	23	671	693	671	693	0.97

Sequence Information

Coding Sequence: ATGGGATCGTTGAACCTTATTTGCCCAATGTGCTGTGGCGAAACTTTTAATAACCCGCAGTCATTGAAGTATCATTTGTTGAGCATGACAGACAATTTGTATTGTCCTGGATGTTCGCAGCGAGCTGACTCTGTAATGGCATTGATCCAGCATTTGGATCGCTGTGGGCAGAGCTTGGAACCTGAAGAGCATGAGAAGGGTCATGTCATACAACCGCAACCAGAAACAGAACAAGGAGTTCTTATGGGTACAACTGTTGAACCAATAAATCAAAGTTTTTTAACAACAGTAAACGATAGCGGAATAATGATAGTAAGGGGACAGCAGACAATACAAGTTGATGAAAATGGGGAAGTTAAAGTCATGGAGAAGATGGATACGGAAGAGTCGCAGATAAGTCAGAATATATTGGAATTTAAGATAGCAGAAAAATTGTCTAACATTGCCACTGTGGCAGGAGAAAAATCGATTGCTTCGGACTCAATAGTAACGAGCCTTGTGACGGAAGTGAATGATAAAGAAGCGGGTGGAAATGTTGTCGCCATCCTACCTAGCAGTTCTGAACTTTTAGAAGAAGCCACCGGTGCTCTGATAAATATGGACCATATAAATGATGTAGAAGAACTCAATGGTCCCGAGCTCCTTAACGTGAAGCAGGAGCTGTGCGAGTTGGAACCGGAAGCTGTTTATAGCTGTACTAGTTGCGAAATGAGCTTCAATTCAGTTTTGGAGCATATCAAGCAGTTTCATGATGGTCAGGAGGTTTTGCTTGAAATGGCTGAACAGTTGGAAGACTTAACAAGCATACCTGCTACATCGACAATATCGGAGGAGCCAGAGAGTTTAGTTCCAGCTCAGCAACCCACGATGAATACTCTTCGTACAGAGGAATGTGTAGACAGCGAAGGTCGATTGTATACGAGAAAAGTCGTGCAAATTGAGCGATTTTGGGACAGAGCTCCTATCCAATCTACACTTCGATCAAATAAGGCGCCGATGATCGAAAAATTCTTCTCTAACGTTGAAGGTGTGAAGGTGCGGGAAAAAAAGTTGGCAACTGCGCCAATACGAATGTATAGATGCAATCAGTGTCTTCAGCAATTTTCGAAATTAGGAAATTTTCGAGTTCATGCGTGCTTAAACGGTAGCAATCGATGTGACAATTGTGATCAAACGTTCGCAACGTTGAAGGCCTTACAGCTCCACGCAAAGGTACACGAAGGTGAACCTGACACTAGTCGAACATTTGTATGTACCACTTGCGGTACAGAATTTTGCTCTCACAAAAGTCTTCGCTTACATTCTCGAATGCATGCACCGGTGAGAGCGCGTCATGTAGATGCACCGGAAGGAACGCCAAAGGCAACTTTCACGTGCCTTGAATGCGGTAAAACGTTATCAGAATCGTACAAAGAAGCACACATGGCATTGCACTCGAACGATTCTGTCACTTGCACCGTGTGTAATAGAAAATTTGATTCTGCGGATAGCTTAGCGATGCACGCCGCCGTGCATACTGAGCTTAATCAATCGCAGTCACCCACCTCTGTGATAACCGAACCGAGCGAGCCTGGAGAAAACCAAAAACCGTATCAGTGTCAACATTGTGGTCGGCGATTCACTAGGCCTCATGAGAAAGTTAAACACGAACGTATACATACTGGAGAGAAGCCGCACGCTTGTGAGGTTTGCGGGAAGACATTTCGTGTATCCTATTGTCTAACTCTGCACATGCGCACCCACACGGGCGTACGGCCTTACGGATGCCAACATTGTGGGAAGAGATTCAAGGCCTCCTCGGTGTACAATCATCATCTTTTGACGCACGGCGAAGAGCGGGCCTACACGTGTCCGTATTGCCCGAAGACGTTCAAAACACGCGTTCAGTTGGCCGGTCACAAGAACAGTCACACGAAGCCTTTCCGCTGTACAGAGTGCTCCCGTCCGTTCGCTTCTCTCTACGCCGCCCGCGCTCACATACAGACTCACAAGAAGGACAATAATTTGAAGTTTAGCTGTTACATATGTGGCGCATCCTACGGCAGGGCCTTTGCTTTGCGCGACCACCTTAAGCAACACGGCCAAGATATTCTGGCTCCGCCGGAGCcggcgagggaggaggaggtAAACCAGGGGGACGACTTTTTATTACCAGAAGAGGAAGTCGAGGAAGAGGACGAGTTAGTCATCCCTTCGCCTCTACCCGTCGCACAATCGTCGGAGGCTGAAGACTCGGACTGA
Protein Sequence: MGSLNLICPMCCGETFNNPQSLKYHLLSMTDNLYCPGCSQRADSVMALIQHLDRCGQSLEPEEHEKGHVIQPQPETEQGVLMGTTVEPINQSFLTTVNDSGIMIVRGQQTIQVDENGEVKVMEKMDTEESQISQNILEFKIAEKLSNIATVAGEKSIASDSIVTSLVTEVNDKEAGGNVVAILPSSSELLEEATGALINMDHINDVEELNGPELLNVKQELCELEPEAVYSCTSCEMSFNSVLEHIKQFHDGQEVLLEMAEQLEDLTSIPATSTISEEPESLVPAQQPTMNTLRTEECVDSEGRLYTRKVVQIERFWDRAPIQSTLRSNKAPMIEKFFSNVEGVKVREKKLATAPIRMYRCNQCLQQFSKLGNFRVHACLNGSNRCDNCDQTFATLKALQLHAKVHEGEPDTSRTFVCTTCGTEFCSHKSLRLHSRMHAPVRARHVDAPEGTPKATFTCLECGKTLSESYKEAHMALHSNDSVTCTVCNRKFDSADSLAMHAAVHTELNQSQSPTSVITEPSEPGENQKPYQCQHCGRRFTRPHEKVKHERIHTGEKPHACEVCGKTFRVSYCLTLHMRTHTGVRPYGCQHCGKRFKASSVYNHHLLTHGEERAYTCPYCPKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIQTHKKDNNLKFSCYICGASYGRAFALRDHLKQHGQDILAPPEPAREEEVNQGDDFLLPEEEVEEEDELVIPSPLPVAQSSEAEDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625657;
90% Identity: iTF_00393765;
80% Identity: -