Basic Information

Insect: Cryptocheilus praepositus
Gene Symbol: -
Assembly: GCA_033815515.1
Location: JAWWQZ010000084.1:856654-873689[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.02 2.2 9.4 0.2 6 21 12 27 6 28 0.86

2 14 4.6 5.1e+02 1.9 0.0 2 20 34 52 33 54 0.87

3 14 3.1 3.4e+02 2.5 0.3 1 12 234 245 234 254 0.88

4 14 0.045 4.9 8.3 1.7 1 20 363 382 363 384 0.94

5 14 0.00018 0.02 15.8 0.3 2 23 389 410 389 410 0.97

6 14 0.00088 0.097 13.6 5.4 1 23 420 442 420 442 0.98

7 14 0.033 3.6 8.7 0.2 1 23 461 482 461 482 0.92

8 14 0.00062 0.068 14.1 0.1 2 23 488 509 487 509 0.95

9 14 4.5e-05 0.0049 17.7 4.8 1 23 535 557 535 557 0.99

10 14 1.9e-06 0.00021 22.0 3.7 1 23 563 585 563 585 0.96

11 14 0.001 0.11 13.4 3.9 3 23 593 613 591 613 0.97

12 14 1.4e-06 0.00015 22.5 0.8 1 23 619 641 619 641 0.98

13 14 8.6e-05 0.0094 16.8 0.2 1 23 645 667 645 667 0.99

14 14 0.0004 0.044 14.7 0.2 1 23 675 697 675 697 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.02	2.2	9.4	0.2	6	21	12	27	6	28	0.86
2	14	4.6	5.1e+02	1.9	0.0	2	20	34	52	33	54	0.87
3	14	3.1	3.4e+02	2.5	0.3	1	12	234	245	234	254	0.88
4	14	0.045	4.9	8.3	1.7	1	20	363	382	363	384	0.94
5	14	0.00018	0.02	15.8	0.3	2	23	389	410	389	410	0.97
6	14	0.00088	0.097	13.6	5.4	1	23	420	442	420	442	0.98
7	14	0.033	3.6	8.7	0.2	1	23	461	482	461	482	0.92
8	14	0.00062	0.068	14.1	0.1	2	23	488	509	487	509	0.95
9	14	4.5e-05	0.0049	17.7	4.8	1	23	535	557	535	557	0.99
10	14	1.9e-06	0.00021	22.0	3.7	1	23	563	585	563	585	0.96
11	14	0.001	0.11	13.4	3.9	3	23	593	613	591	613	0.97
12	14	1.4e-06	0.00015	22.5	0.8	1	23	619	641	619	641	0.98
13	14	8.6e-05	0.0094	16.8	0.2	1	23	645	667	645	667	0.99
14	14	0.0004	0.044	14.7	0.2	1	23	675	697	675	697	0.97

Sequence Information

Coding Sequence: ATGGGATCGTTGAACCTCATTTGTCCGATGTGCTGCGGAGAAACTTTTAACAATCCGCAGTCGTTAAAGTATCACTTGTTGAGCATGACGGACAATCTGTATTGTCCTGGATGTTCGCAGCGGGCGGACTCAGTGATGGCACTGATACAACATTTGGATCGCTGCGGGCAGAGTTTAGAACCTGAAGTGCATTGCATAGAGGACGAGAAGGATCACAATGTACAACCGCAACCTGAGACAGAATCAGAAGTTCTCATGGGTGCAAATGTTGAACCGATAAACCAAAGTTTTTTAACAACAGTAAATGATAATGGAATAATGATAGTAAGAGGACAGCAGACAATACAAGTAGATGAAAATGGGGAAGTTAAAGTCATGGAGAAGGTGGACGCAGAAGAGTCGCAGATAAATCAGAATATATTGGAATTTAAGATAGCAGAGAAACTGTCTAATATTACCAGTGTGGGAGGAGAAAAGTCTATGGCTCCTGATTCGATAGTGACAACCCTTGTACCGGAATCGAACACTAAAGAAGAGGATAGAAGTGTTGTCACCATCCTGCCTAGCAACTCTGAACTTTTAGAAGAAGGGACTGGTACTTTGATAAACATGGACCATATAAATGACGTAGAAGAACTTAACGGTCCTGAGCTCCTCAGTGTTAAACAGGAGCTGTGTGAGTTGGAGCCAGAAGCTGTCTATAGCTGCACCAGTTGCGAAATGAGCTTTAATTCGGTTCTGGAACATATCAAGCAATTCCACGATGGTCAGGAGGTATTGCTTGAAATGGCAGAACAGTTGGAAGACTTAACGAATATACCTGCGACATCCGCACTGTCGGAAGAGCCTGAAACTCTTGTTCCGGCTCAACACCCTGCAATCAACACACTTCGTTCCGAAGAATGTGTGGACAGCGAAGGGCGATTGTATACGAGAAATGTAGTCCAGATCGAGAGATTTTGGGACAGGACTCCCATCCAATCTACATTGCGATCGAACAAGGCGCCGATGATTGAAAAATTTTTCTCGAACGTCGAAGGTGTAAAGGTGCGGGAAAAGAAACTAGCAACAGCGCCAGTACGAATGTACAGATGCAACCAATGTCTTCAGCAGTTTTCCAAATTAGTTAATTTCCGTGTTCACGCGTGTTTAAACGGCAGCAACCGATGTGATAATTGCGATCAAACGTTTGCAACGTTAAAGGCCTTACAGCTGCACGCAAAGGTACACGAAGGTGAACCCGACACTAGTCGAACATTCGTATGTTCCACTTGCGGTACAGAATTTTGCTCTCACAAAAGTCTACGCTTACATTCTCGAATGCATGCACCAGTGAGAGCACGTCACGTCGATGCACCGGAAGGAACGCCGACGGCAACTTTTACGTGTCTGGAATGCGGTAAAACGTTGTCGGAATCCTACAAAGAAGCGCACATGGCGTTGCATTCGAACGATTCCGTCACTTGTACTGTCTGCAATCGAAAATTCGATTCTGCAGACAGCTTAGCAATGCACGCGGCCGTACATACTGAACTCAATCAATCTCAGTCCCCGACGTCATTAACAGCCGAACCGAGCGAGCCAGGCGAAAACCAAAAACCATATCAATGTCAGCATTGCGGTCGACGATTTACAAGGCCTCACGAGAAAGTTAAACACGAACGGATACACACCGGAGAAAAACCACACGCTTGCGAGGTCTGCGGCAAGACGTTTCGCGTGTCCTACTGCCTGACCCTCCACATGCGGACGCACACGGGCGTGCGGCCGTACGGCTGTCAGCACTGCGGGAAGCGGTTCAAGGCCTCATCCGTGTACAACCACCACCTCCTGACGCACGGCGAGGAACGTGCCTACACGTGTCCCTACTGTCCAAAGACCTTCAAAACGCGCGTCCAGCTAGCCGGCCACAAGAACAGTCACACGAAACCTTTCCGCTGTACAGAGTGTTCCCGTCCCTTCGCCTCGCTTTACGCGGCCCGCGCCCACATACAGACCCACAAGAAGGACAATAATCTGAAGTTCAGCTGTTACATATGCGGCGCCTCATACGGCAGGGCCTTCGCTTTACGCGACCACCTCAAACAACACGGACAAGATATCCTCGCCCCTCCTGAACCGGCACGGGAGGAGGAGGTCCACGAAGGCGATGACTTTTTGCTGCCGGAGGAGGAAGTCGAGGAAGAGGACGAACTCGTGATACCCTCGCCTCTGCCCACCGCACAATCGTCGGAGCCCGAGGACTCGGATTGA
Protein Sequence: MGSLNLICPMCCGETFNNPQSLKYHLLSMTDNLYCPGCSQRADSVMALIQHLDRCGQSLEPEVHCIEDEKDHNVQPQPETESEVLMGANVEPINQSFLTTVNDNGIMIVRGQQTIQVDENGEVKVMEKVDAEESQINQNILEFKIAEKLSNITSVGGEKSMAPDSIVTTLVPESNTKEEDRSVVTILPSNSELLEEGTGTLINMDHINDVEELNGPELLSVKQELCELEPEAVYSCTSCEMSFNSVLEHIKQFHDGQEVLLEMAEQLEDLTNIPATSALSEEPETLVPAQHPAINTLRSEECVDSEGRLYTRNVVQIERFWDRTPIQSTLRSNKAPMIEKFFSNVEGVKVREKKLATAPVRMYRCNQCLQQFSKLVNFRVHACLNGSNRCDNCDQTFATLKALQLHAKVHEGEPDTSRTFVCSTCGTEFCSHKSLRLHSRMHAPVRARHVDAPEGTPTATFTCLECGKTLSESYKEAHMALHSNDSVTCTVCNRKFDSADSLAMHAAVHTELNQSQSPTSLTAEPSEPGENQKPYQCQHCGRRFTRPHEKVKHERIHTGEKPHACEVCGKTFRVSYCLTLHMRTHTGVRPYGCQHCGKRFKASSVYNHHLLTHGEERAYTCPYCPKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIQTHKKDNNLKFSCYICGASYGRAFALRDHLKQHGQDILAPPEPAREEEVHEGDDFLLPEEEVEEEDELVIPSPLPTAQSSEPEDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625657;
90% Identity: iTF_01255871;
80% Identity: -