Pper015788.1
Basic Information
- Insect
- Priocnemis perturbator
- Gene Symbol
- ZFY
- Assembly
- GCA_963942575.1
- Location
- OZ012651.1:15836625-15839929[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0019 0.19 12.7 0.8 1 23 23 46 23 46 0.93 2 16 8.4e-06 0.00084 20.1 1.9 1 23 52 75 52 75 0.97 3 16 0.00056 0.056 14.4 5.1 3 23 82 103 80 103 0.95 4 16 0.00016 0.016 16.1 0.8 1 23 108 131 108 131 0.97 5 16 2.4e-07 2.3e-05 25.0 0.5 2 23 138 159 137 159 0.97 6 16 3.7e-06 0.00037 21.2 0.9 1 23 165 187 165 187 0.97 7 16 9.4e-05 0.0093 16.8 0.4 1 23 193 215 193 215 0.96 8 16 0.00085 0.084 13.8 0.3 2 23 419 441 418 441 0.91 9 16 0.34 34 5.6 0.3 1 23 453 476 453 476 0.95 10 16 0.038 3.8 8.6 3.5 1 23 489 512 489 512 0.93 11 16 0.00014 0.014 16.3 5.8 1 23 518 540 518 541 0.95 12 16 0.0059 0.59 11.1 0.5 2 23 547 569 546 569 0.94 13 16 0.00068 0.068 14.1 1.5 1 23 574 597 574 597 0.98 14 16 3.1e-07 3e-05 24.6 0.4 2 23 604 625 603 625 0.96 15 16 2.6e-06 0.00026 21.7 1.3 1 23 631 653 631 653 0.97 16 16 3.3e-05 0.0033 18.2 1.0 1 23 659 681 659 681 0.98
Sequence Information
- Coding Sequence
- ATGATAGCGCATTTGGCCGAAAAACACGAAGGAACCGGCAACGACAATTTCACCAGTAAACGCGAGTTCGCCTGCGTCGTTTGCGGACTAGTCTGTGCCCGAAAAGAAACACTTCGATCGCACTACGTGCGAAAACACACCCAGCACTACGGTTACTCGTGCGAGCATTGTGGCAAGGAATTTAAAATAAAGGGTGACCTGACGACGCACACCAGATTGAATCACAGAGAATCACCGGTGATTTGCGATGTGTGTGGGAAAACGTGTCGAAACAGTCACAGTCTCTACACGCATCAGAAGCACGCTCATTATAAGGCGAAATACGAGTGCCCGCTTTGCCATCGAAGGCTCGTCACGAAGGAGAATCTCGATCAGCATGTGTTGACGCAGCACGAGCGGAAGGAGAAGTCGGTGTGCGAAGAGTGTGGAAAGACGTTCTTCGAGAACTACGATCTGAGGAAGCATATGAGGATTCATACAGGGGATAAGCCGTATAGTTGCACCGTTTGCGGGAGAGCATTCGCCAGACACAGTAGTCTGAGTCAACATTTGCTCCTGCATACAGGGGAGAGGATTTACGCATGCGACGTTTGCGGAAAATCGTTCGCGCAGAAGGCCGGACTGATTTGCCACCGGAAAATTCATTCTGGCGCGTACGATCTCGAAGCGTACAACTCTCGCGGCATCTTCATCTACGAAAAGGAATCGGTCGTTATGAGAAAATGGCAGATTCTCGAGTTCGACGGCAAGCCATACTACGCCTTCGTCCCGGAAGACGACACTCCGTTACTGGATGAAGACATTCCCGAGCAACTGGACGAAATGATCGAGGAGGTGGAAGAGAAGACGAAAGTCGCGAAAGTCGAGTGCCTCTACGACGAAGAGAATCTTCAGTACGACTCGATGGACGAGCGACTGTACGACGACGAGAACATCTTCAACGGAAACGACGACATGACGGAAGAGGACGTAAAACCGATCATCTTGAACGGGTCGAATGAAAACGACAAATCGGCGTTGGGAGACTTATATCAGGTGAAAGTTCAAGGAAGCATGGTCACGATAGAGAAGTTAACGTCGAACGACGTTGCCGCCGTGAAAGACCTAGATTACGATCAAATAGACGAGTCCTTCAACGAGCCGGAAGGTGAGGAGTATCTCGATGAAGAGATTCTTCAGACAGCGACCATAACGGAAACGACGCCGCCGCCGAAGACTCGTCGGAAGCCATTAAGGGATTCCGGAAATGCTCTAAAATGCAAGCTTTGTTCAGAAGTGTTCAGCTCGGCGATCTCGTTTAGGAAACACGTAGCGTGGACGCATAAGAAGAAAGTGTGCATACAGGAGGACGGGGCGTACATCTGTGCGGTATGTGACTACAGAACTTTAAAGAAGAGCCTGTTCGCAGCTCATCTGGAGAGAAAACACGAGACCTGGTCGAGAAAACGGCCGAACAACATGCTCTTCCCCTGCGCGGCGTGCGGTTTCGTGTGCAGATCGAAACACTCTTTACAGTCCCACTTCATAAGAAAGCACACCGACAAGTACGAGCATCAATGTAAGTTCTGCCCGAAAAAGTTCAAGGTGAAAGGGGATCTCACGAATCACGTCCGTTTCCATCACAAGGAAAAACCGTTGAATTGCGACGTGTGCGGTAAACTATGTCAAAACAGCGGTTCCCTTTACGTGCATCAAAAGTGGGCCCACTACAAGCCGAAGTACGAGTGTCACATTTGCAAGCGGCGCATGGTGACGCAGGAGAATTTGGATCAGCATCTGCTGACTCAGCACGAGAAGAGGGAAAAAATTGTCTGCGCGGAATGCGGTAAGACTTTTACGAAAAAGGACTCGTTCAAGAGGCATATGGCAGTTCATACAGGTTGCAAGCCGCACTCTTGCCTGATCTGTAACAAACCTTTCGCGAGAAGGTCCCAGCTGCGGCAACATCTGCTCATACACACGGGAAAGAGACCGTTCGTTTGCGATATCTGCGGCAAAGCGTTCACGCAGAAGCCTGGATTGATTTGTCATAGGAAAACGCATCCTGGGCCGCATCCACCATTGCCAGTTATGCCGATCGCGGATATCGTTAAAGAGTTTACCGAAGGATACGTGCAGGAGATCAATGCGCGCGAGACTGAAGAGAGGATCGACGAGGAGGTCTAG
- Protein Sequence
- MIAHLAEKHEGTGNDNFTSKREFACVVCGLVCARKETLRSHYVRKHTQHYGYSCEHCGKEFKIKGDLTTHTRLNHRESPVICDVCGKTCRNSHSLYTHQKHAHYKAKYECPLCHRRLVTKENLDQHVLTQHERKEKSVCEECGKTFFENYDLRKHMRIHTGDKPYSCTVCGRAFARHSSLSQHLLLHTGERIYACDVCGKSFAQKAGLICHRKIHSGAYDLEAYNSRGIFIYEKESVVMRKWQILEFDGKPYYAFVPEDDTPLLDEDIPEQLDEMIEEVEEKTKVAKVECLYDEENLQYDSMDERLYDDENIFNGNDDMTEEDVKPIILNGSNENDKSALGDLYQVKVQGSMVTIEKLTSNDVAAVKDLDYDQIDESFNEPEGEEYLDEEILQTATITETTPPPKTRRKPLRDSGNALKCKLCSEVFSSAISFRKHVAWTHKKKVCIQEDGAYICAVCDYRTLKKSLFAAHLERKHETWSRKRPNNMLFPCAACGFVCRSKHSLQSHFIRKHTDKYEHQCKFCPKKFKVKGDLTNHVRFHHKEKPLNCDVCGKLCQNSGSLYVHQKWAHYKPKYECHICKRRMVTQENLDQHLLTQHEKREKIVCAECGKTFTKKDSFKRHMAVHTGCKPHSCLICNKPFARRSQLRQHLLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGPHPPLPVMPIADIVKEFTEGYVQEINARETEERIDEEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00393740;
- 90% Identity
- iTF_00393740;
- 80% Identity
- -