Cpra000685.1
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- ZFY
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000004.1:531713-536208[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 6.4e-05 0.0071 17.2 3.1 1 23 83 105 83 105 0.98 2 18 0.34 37 5.5 1.5 2 23 135 157 134 157 0.91 3 18 0.0015 0.17 12.9 1.3 1 23 171 194 171 194 0.94 4 18 9.5e-06 0.001 19.8 1.9 1 23 200 223 200 223 0.97 5 18 0.00064 0.07 14.1 5.1 3 23 230 251 228 251 0.95 6 18 0.00018 0.02 15.8 0.8 1 23 256 279 256 279 0.97 7 18 2.7e-07 2.9e-05 24.7 0.5 2 23 286 307 285 307 0.97 8 18 6.6e-06 0.00073 20.3 0.9 1 23 313 335 313 335 0.97 9 18 0.00011 0.012 16.5 0.4 1 23 341 363 341 363 0.96 10 18 0.00096 0.11 13.5 0.3 2 23 566 588 565 588 0.91 11 18 0.39 43 5.3 0.3 1 23 600 623 600 623 0.95 12 18 0.043 4.8 8.3 3.5 1 23 636 659 636 659 0.93 13 18 0.0007 0.076 14.0 7.0 1 23 665 687 665 688 0.95 14 18 0.0067 0.74 10.9 0.5 2 23 694 716 693 716 0.94 15 18 0.00077 0.085 13.8 1.5 1 23 721 744 721 744 0.98 16 18 3.5e-07 3.8e-05 24.4 0.4 2 23 751 772 750 772 0.96 17 18 2.9e-06 0.00032 21.4 1.3 1 23 778 800 778 800 0.97 18 18 3.8e-05 0.0042 17.9 1.0 1 23 806 828 806 828 0.98
Sequence Information
- Coding Sequence
- ATGGCGATTCTTACAGAATGGAAGATACCAGAAGACAAGATAACGATGTCAACGATAATTGCACCCACTGTTCCTCACTTGCAGAAGATCTCACAGTCTAGAGCTTCACATCGCGAAGATCGACGAAAACAAGACTCGAAATCGCCTCTACCAAAGTCCGCAAACTACGAAGAACAGGAACTTCCTACCGAAGACGAAGAGGAATCGCCAGAAAAAGCAACGCAAGACAAAAAATCAAACTCCATCTTCACATGCGAAACCTGCTCGATCAACTTCAAAAACAGATACCTCCTAAAACGTCACAAGCTCACCCACAATATCGAGAAGCAAAAGTATGAAGTTCGTCCTTCGTCAAAGGATTCCACCTTCACCGATTTACTCCCCAGAAGTCAAGAAGCACTATCCTGCGTGACCTGCGATTTCCGATGCAACAAACGTTCGACCATGATAGCGCATCTGGCGGAGAAACACGAGGGCACAGGAAACGATAACTTCACCAGCAAACGTGAGTTTTCCTGCGTCGTTTGCGGACTAGTTTGCGCCCGAAAGGAAACTCTTCGATCTCACTACGTGCGCAAACACACCCAACACTACGGCTACTCCTGCGAGCATTGCGGCAAAGAGTTCAAAATAAAGGGCGACCTAACGACGCACACCAGACTGAACCACAGAGAATCGCCAGTGATTTGTGACGTGTGCGGGAAAACTTGTCGAAACAGTCACAGTCTCTACACCCACCAGAAACACGCGCATTATAAAGCGAAATACGAGTGTCCGCTTTGTCATCGGAGGCTTGTTACGAAGGAGAACCTCGATCAGCACGTTTTGACGCAACACGAGAGGAAAGAAAAATCGGTGTGCGAGGAATGTGGGAAGACATTCTTCGAGAATTACGATCTGAGGAAGCATATGCGGATTCACACCGGAGATAAGCCGTATAATTGCACCGTTTGTGGCAGAGCTTTCGCCAGACACAGTAGTTTGAGTCAACATTTATTGCTGCATACGGGGGAGAGGATTTACGCATGTGATGTGTGCGGAAAATCGTTCGCGCAGAAGGCCGGGCTAATTTGTCACAGGAAAATTCATTCTGGCGCGTATGATCTCGAAGCGTACAACTCTCGCGGCATCTTCATCTACGACAAGGAATCGGTCGTTATGAGAAAATGGCAGATTCTAGAGTTCGATGGCAAGCCGTACTATGCCTTCGTCCCCGAAGACGATACCCCGTTACCGGACGAAGAGATTCCAGAACAATTGGTAGAAACGatcgaggaggaggaagagaagacGAAAATTACGAAAGTTGAGTGTCTCTACGAAGATGAGAATCTTCAGTACGACTCAATGGATGAGCGATTATACGACGACGAGAACGTCCTCAATGGGAATGAAGAAGTATTGGAAGAGGACGTAAAACCGATCATTCTGAACGGATCTAACGACAGCGACAAGCCAACGATGGGAGACTTATATCAGGTGAAAGTTCAAGGAAGTATGGTCACTATAGAAAAATTGTCAGCCAACGATGTTGCCAGTGTGAAAGATACTGAGTACGAGCAGATAGACGAGTCTTTTAACGAGCCGGAAGGCGAGGAATATCTCGACGAAGAGATGCTTCAGTCTTCGACCGTAACCGAAACGACGCCAACGAAGAGTCGTCGGAAACCTCTGCGCGATTCTGGGAATGCGTTAAAATGCAAGCTTTGTTCAGAAGTGTTTAGCTCAGCGATCTCATTTAGGAAACACGTCGCGTGGACGCATAAGAAGAAAGTGTGCATACAGGAAGACGGGGCGTACATCTGTGCGGTATGTGACTACAGAACTTTAAAGAAGAGTCTGTTCGCGGCGCACCTGGAAAGAAAACACGAGACTTGGTCGAGAAAACGGCCGAACAACATGCTCTTTCCTTGCGCGGCGTGTGGTTTCGTTTGCAGATCAAAACACTCGTTACAGTCCCACTTCATAAGGAAGCACACCGACAAGTACGAGCACCAATGTAAGTTCTGTACGAAAAAGTTCAAGGTGAAAGGCGACCTCACGAATCACGTCCGTTTTCATCACAAGGAAAAGCCGTTGAATTGCGATGTCTGCGGTAAGCTTTGTCAAAACAGCGGTTCTCTTTACGTGCATCAAAAATGGGCACATTACAAACCGAAGTACGAGTGTCACATTTGCAAGCGACGCATGGTGACGCAGGAAAATCTGGATCAGCATCTATTGACTCAGCacgagaagagagagaagatCGTTTGCGCGGAATGCGGTAAAACGTTTACGAAAAAAGACTCCTTCAAGAGACACATGGCGGTTCACACTGGTTGCAAGCCACACTCTTGTCTGATCTGCAACAAGCCTTTTGCGAGAAGGTCTCAGCTGAGGCAACATCTTCTGATACACACGGGGAAGAGACCGTTTGTCTGCGATATCTGCGGCAAAGCGTTCACACAGAAGCCCGGTTTGATTTGTCATAGAAAAACGCATCCTGGGCCCCATCCGCCATTGCCGGTCATGCCGATCGCTGATATTGTTAAAGAGTTTACCGAAGGATACGTGCAAGAGATCAATGCACGCGAGAATGAGGAGAGGATCGACGAGGAGGTATAG
- Protein Sequence
- MAILTEWKIPEDKITMSTIIAPTVPHLQKISQSRASHREDRRKQDSKSPLPKSANYEEQELPTEDEEESPEKATQDKKSNSIFTCETCSINFKNRYLLKRHKLTHNIEKQKYEVRPSSKDSTFTDLLPRSQEALSCVTCDFRCNKRSTMIAHLAEKHEGTGNDNFTSKREFSCVVCGLVCARKETLRSHYVRKHTQHYGYSCEHCGKEFKIKGDLTTHTRLNHRESPVICDVCGKTCRNSHSLYTHQKHAHYKAKYECPLCHRRLVTKENLDQHVLTQHERKEKSVCEECGKTFFENYDLRKHMRIHTGDKPYNCTVCGRAFARHSSLSQHLLLHTGERIYACDVCGKSFAQKAGLICHRKIHSGAYDLEAYNSRGIFIYDKESVVMRKWQILEFDGKPYYAFVPEDDTPLPDEEIPEQLVETIEEEEEKTKITKVECLYEDENLQYDSMDERLYDDENVLNGNEEVLEEDVKPIILNGSNDSDKPTMGDLYQVKVQGSMVTIEKLSANDVASVKDTEYEQIDESFNEPEGEEYLDEEMLQSSTVTETTPTKSRRKPLRDSGNALKCKLCSEVFSSAISFRKHVAWTHKKKVCIQEDGAYICAVCDYRTLKKSLFAAHLERKHETWSRKRPNNMLFPCAACGFVCRSKHSLQSHFIRKHTDKYEHQCKFCTKKFKVKGDLTNHVRFHHKEKPLNCDVCGKLCQNSGSLYVHQKWAHYKPKYECHICKRRMVTQENLDQHLLTQHEKREKIVCAECGKTFTKKDSFKRHMAVHTGCKPHSCLICNKPFARRSQLRQHLLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGPHPPLPVMPIADIVKEFTEGYVQEINARENEERIDEEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01255846;
- 90% Identity
- iTF_01255846;
- 80% Identity
- -