Pper020302.1
Basic Information
- Insect
- Priocnemis perturbator
- Gene Symbol
- -
- Assembly
- GCA_963942575.1
- Location
- OZ012655.1:14727641-14732345[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.046 4.6 8.3 2.2 1 23 436 458 436 458 0.97 2 19 0.08 8 7.6 0.6 2 23 495 516 494 516 0.93 3 19 0.002 0.2 12.6 3.9 1 23 585 607 585 607 0.97 4 19 0.002 0.2 12.6 0.8 2 23 611 632 610 632 0.96 5 19 1.6e-05 0.0016 19.2 2.1 2 23 687 708 686 708 0.97 6 19 0.028 2.8 9.0 7.0 1 23 713 735 713 735 0.94 7 19 0.00049 0.048 14.6 0.7 1 21 741 761 741 765 0.92 8 19 0.00046 0.046 14.6 3.4 2 23 837 858 836 858 0.95 9 19 0.00023 0.022 15.6 5.0 1 23 908 930 908 930 0.97 10 19 0.00032 0.032 15.1 0.7 1 20 935 954 935 956 0.94 11 19 0.00088 0.087 13.8 0.7 2 23 967 988 967 988 0.98 12 19 3.3e-05 0.0033 18.3 0.6 2 23 1027 1048 1026 1048 0.97 13 19 3e-05 0.003 18.4 1.6 1 23 1053 1075 1053 1075 0.95 14 19 0.00017 0.017 16.0 2.9 1 23 1081 1103 1081 1103 0.98 15 19 5.3e-06 0.00053 20.7 0.4 1 23 1119 1141 1119 1141 0.95 16 19 4.3e-07 4.3e-05 24.2 0.6 1 23 1147 1169 1147 1169 0.99 17 19 4.7e-05 0.0046 17.8 0.2 1 23 1175 1197 1175 1197 0.97 18 19 0.00017 0.017 16.0 4.1 1 23 1203 1225 1203 1225 0.96 19 19 0.012 1.2 10.2 0.4 1 20 1231 1250 1231 1252 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCGTGGAAATAAATACGTCTGATACTCCACAAAATGAGGGGAGTATCGTGTCCGCGGTGGAGATATGCCGAGTCTGCCTTCTTGGGAACCTGGTGATGCGGGACCTTTTTGTACGGAATGGGGTCGACTCCCTGTCAGCGAAGGTGATGAGCTTCGCCAACGTTAAGATGGTACCTACCGATGGACTACCCACCAGAGTATGCTGCATGTGCGCAGAGAAACTGGAGTCAGCGTACGAgcttaaattgcaagtagagcaagcagacGTCGTTTTGAGAcaaagatatgaaagcataaacATTAAAGAGGAGCTCTTCTTCAACGAGGTTGAAGTACATCTGAATGCAGAAAGAAACAATGGCATGGGAGAggttcaagatcattatgaaaccaGAGCTGAGACTGCGAGTGTTAAGTCTGAGCATGATAAGTCAACACTTTTAAAAGACCAGTTAGCACTGTTGCAAGTTGAAAAATTTGCTGAGCAAGAACAACTTCAGACAGAGCAACAAGAGATGCATGTGATGGATGAAGAAATGACAGCTGTCGAAGACTCAGAGGAAATGGTCGATAATAAGGACGAATTGAAAGTACACTGCATGACTATTACTGATGCCGATGCAATTCACACAGAGGAACATGATTATATCATGCAACAAAGTTGCATGATGCCAGCCCATGAACAACAGTTGCATGCAGAACATTTGCAAGAAGAAGACTTGCAGGAAGAGCACTTGCAAGAGGAGCACTTACAAGAGGAACATTTGCAAGAGGAACACATGCAGGAAGAACACTTGCAAGAAGAACATTTACAAGAAGAAGATTTACAAGAAGAGCATTTACAAGTGGAACATTTGCAAGAGGAACATTTACGAGAGGAACATTTGCAAGAGGAACATTTGCAAGAGGAACATTTACAAGAGGAACATTTACAGGAGGAACATTTGCAAGAGGAACATTTGCAAGATGTACATTTACAAGAAGAACACTTGCAAGAACACTTACAAGAGGAACACTTCCAAGAACAGTTACAAGAAGAACACCTGCACGAACAGTTACAAGAGGAACACTTTCAAGAACAATTACAGGAGGACCCTCAAGACGAGCCACAAGGACAAGAAATTCAGGAGGAAGAACCTCAAGAACCGCAGCAAGGAGAAGCCAGAAGGAGCAAAAGAAAATCGGCTCGACGCACGTTTACAACCGAACGCAATTCCGACGAGGAAAACTATTTTGAGAATCTTAATCTTAGCTCCCGTCTGAAGAGGGTGCAGGCGGATAAGTCAGAAAAAGTTTTCTTTATGTGCTACCTCTGTGACAAGCAATTCCTATCGAAGGCCGTACTGAAAGAGCACATGCACTCGCACGAGGAAGTTCGAAGGGCGTTGTCGTTGAAGAAGACTCCAGAAAAATCTCAGAAAATACCCACTAGCACGCTTCCCGCGAAGATGCCGCCGTCCGGGAAACGGGCAAACAAGTGTCCGTACTGCGGAAAAGAATATTTGTACATAATCTCGTTCAGCAAGCATTTAAAACAgcacgagagagagcgagaggaatCGAAGGAAGATCCGATGCCGTTGGAAATTTCATTCCACGAGGACGAGCACAGTCTGGACTTCGAGCAGTCTCAATACTTGGACACCGACGGCAGAAGAAGATCGAGGAAGGAAGAAACGACCGAAGATGATGATGCAGACGAACAAAGTGGTAGCGAAAGACGAAGAAAGACGCGGTCCGAAGAATTCTCCTGCAACAAGTGTTCGGAAAAGTTCCACACGAAAAGAGCCCTTCGAAAACACGCTGTCACGCATATTAGCCTGAAGTGTAGCGTCTGCGAGGAAGAGTTTGACACGTTGGAGAAGTTGAGAAATCATCGTACCAAGCACGTAGTCGAAGGGGTACTGACGGACCAGGATATAGAAGAGGATGCAAAGATGGCGGAAAAAGGTAGGGAAGAGCATGGCGAAGCCGAGAAAGACGACGATGAAGATGAGGACGACGAAGCACTTGATGGAGAGGGAAAGGATAAATGGGCGGAAAAGGACTTAAAGTGCCCGAATTGTCCGATGATGTACTCTCACAAGAAATCACTGTCCAGACACATGGAAACGCATTCTGGGACTAAGTACAGCTGCAAGATATGCTGCCAGCAGTTTACGAGGAAAGATCATTTGCGAAGACATTCGGAGCAACATGGACGCGTGAAGTCGTATAAATGCACGCAATGCAACAAAACTTTTGGCAACGAGCTAACGCTGCGCAATCATCTGATTGCGACGAATCATAAAACCTTCGTTCACGGTCAGGAGTACGATCCCAATAAACGCATCAAGAGACACGCTGCCAAGGCGGCGCAGAAGATCATTGACAAGATCAAGACGGAGGACGGTCTGGAGGATTATGACGACGATGACAATAATGATTCGGTCGAGCTCGACAACCGCTATAATCGAAAACGTGATGGTATGCCAAAGAAATATAattttaaaaaagaacttgagtGCGCCACTTGTAATAAGAGATGTAGCTCGAAGCAGTCTCTTACCAAACACATGGAGCAGCACGTTAAAGATGAGAAGACGGAGAAAGCGGAGAAACTGGATAAAAATAAGAAGCCAGTTGAGAAAAAAGAACAAAGGGATGTGGTagacgatgatgacgacgatgacaattccgatttcgAAAGTGGGTTAGATTGGCCTATGGACAATCATGAGTGCACAACATGTAAAAAGAGATACAGCACAAAAAAGTCACTCTTAAGACATCAGTTGCTTCACGAAGAGCCGAACTTCGAATGCGATATCTGCAATGTTAAGTTCTATAGAAAGGATAAGTTAAAGGCTCACTATGACAAGTGTTCGGAGAAGAATCCCGACCAGGTGAGGAAGTGCAATATATGTGGGGACAGTTTCGAGAATAACGAAATGCTCAGGGAGCATAGATCCAAGCATGTAACCGAGGGAATTCTGACGGAAGAAGATTTGAGGGACATCGAGCCGAGACCGGAGGAGAAGAAGCAGGGCGAGAAGATTGCAAGGAAGAGACGAACGGACATCGTTGGATTAGAATGCACCGAGTGCAACAAGCAGTACACCTCGAGGAAGGGCTTACTCCGCCACATCCAGGTTCACGAAGGGAAGAAGTATCTCTGCGACATTTGCCCAAAGAAATTCTACAGGAGGGAGCATTTGAAGATCCACGTGGCGAAGCACAATATGATCAAGCCTTACAAATGTACCCGCTGCACGAAGCGTTTTATCAAAGAGGAACAGTTAACCAACCATCTGTCGAAGCACGACAGGACGTTCAAGAAGAACAAGGAAACAGATAGCTCGAAGAGGTTCCTCTGCGAGATCTGTTCAAAGAGTTTCACGCAGTCGACAACCTTGATCGCTCATCTGCGAGCGCATAACGGAATAAAACCGTACGTATGCGAAGTATGCTCGAGACCGTTCACCACGAATGCATACTTAAAGATGCACATGAGGACGCACACTCAAGAAAGACCTTACATCTGCCAGTACTGCTCCCGAGCGTTCGCCAGGGCCGACACTCTGGCGAATCACTTAACTTCACACACAGGCGAGGCCAAGTACCACTGCAAGTACTGTCCAAAGAACTTCAGACGACTCAAGTCCCTGAAGGAGCATGTCTTTATACACACCGGCCAAAGACCGTATGCCTGCCCAACGTGCGATCGACGATTCAACAACAACGGAAGTCGATACGCGCACAGTAAAAGATGCAAGCAGAACTTCCTTCAGAATCAGACCCGCACGCAGACCCTCACGCAGGTCCAGAGTCAGCCTCAGCAAAGGGTGCATCAGACTTTAGGACAGGCACAGATCGTGAAGGCGCAAAACATTAAGACCATCACGATCGCTCGGCAAGAGCCCGTGCAACAGGTCATGCAACATCAGGAGATCCTGATGCCGCTTATATTACCCCTTACAGTGACGTTAACGGATGTTGGTGAAGAAGTTATACTTCCGGAAGGCACGAAGATCTTTACGACGTCCTAA
- Protein Sequence
- MDAVEINTSDTPQNEGSIVSAVEICRVCLLGNLVMRDLFVRNGVDSLSAKVMSFANVKMVPTDGLPTRVCCMCAEKLESAYELKLQVEQADVVLRQRYESINIKEELFFNEVEVHLNAERNNGMGEVQDHYETRAETASVKSEHDKSTLLKDQLALLQVEKFAEQEQLQTEQQEMHVMDEEMTAVEDSEEMVDNKDELKVHCMTITDADAIHTEEHDYIMQQSCMMPAHEQQLHAEHLQEEDLQEEHLQEEHLQEEHLQEEHMQEEHLQEEHLQEEDLQEEHLQVEHLQEEHLREEHLQEEHLQEEHLQEEHLQEEHLQEEHLQDVHLQEEHLQEHLQEEHFQEQLQEEHLHEQLQEEHFQEQLQEDPQDEPQGQEIQEEEPQEPQQGEARRSKRKSARRTFTTERNSDEENYFENLNLSSRLKRVQADKSEKVFFMCYLCDKQFLSKAVLKEHMHSHEEVRRALSLKKTPEKSQKIPTSTLPAKMPPSGKRANKCPYCGKEYLYIISFSKHLKQHEREREESKEDPMPLEISFHEDEHSLDFEQSQYLDTDGRRRSRKEETTEDDDADEQSGSERRRKTRSEEFSCNKCSEKFHTKRALRKHAVTHISLKCSVCEEEFDTLEKLRNHRTKHVVEGVLTDQDIEEDAKMAEKGREEHGEAEKDDDEDEDDEALDGEGKDKWAEKDLKCPNCPMMYSHKKSLSRHMETHSGTKYSCKICCQQFTRKDHLRRHSEQHGRVKSYKCTQCNKTFGNELTLRNHLIATNHKTFVHGQEYDPNKRIKRHAAKAAQKIIDKIKTEDGLEDYDDDDNNDSVELDNRYNRKRDGMPKKYNFKKELECATCNKRCSSKQSLTKHMEQHVKDEKTEKAEKLDKNKKPVEKKEQRDVVDDDDDDDNSDFESGLDWPMDNHECTTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEMLREHRSKHVTEGILTEEDLRDIEPRPEEKKQGEKIARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFLQNQTRTQTLTQVQSQPQQRVHQTLGQAQIVKAQNIKTITIARQEPVQQVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00393741;
- 90% Identity
- -
- 80% Identity
- -