Basic Information

Insect: Priocnemis perturbator
Gene Symbol: -
Assembly: GCA_963942575.1
Location: OZ012651.1:15863077-15866824[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00026 0.026 15.4 1.4 1 23 33 55 33 55 0.98

2 18 2.9e-05 0.0029 18.4 4.6 1 23 61 83 61 83 0.97

3 18 7.1e-07 7e-05 23.5 0.3 1 23 89 111 89 111 0.99

4 18 0.0024 0.24 12.4 0.8 3 23 119 140 117 140 0.91

5 18 0.00025 0.025 15.5 0.6 1 23 145 167 145 167 0.96

6 18 0.00016 0.016 16.1 2.1 1 23 177 199 177 199 0.97

7 18 4.4e-06 0.00043 21.0 0.8 1 23 205 227 205 227 0.98

8 18 1.7e-06 0.00017 22.3 0.1 1 23 235 257 235 257 0.97

9 18 0.0015 0.15 13.1 0.7 1 23 345 367 345 367 0.92

10 18 3.9e-07 3.9e-05 24.3 0.8 1 23 373 395 373 395 0.99

11 18 1.2e-07 1.2e-05 26.0 0.1 1 23 401 423 401 423 0.98

12 18 0.00066 0.066 14.1 2.4 3 23 431 452 430 452 0.96

13 18 3.5e-05 0.0035 18.2 5.8 1 23 457 479 457 479 0.97

14 18 8.1e-06 0.0008 20.2 1.8 1 23 488 510 488 510 0.98

15 18 3.6e-06 0.00036 21.3 0.2 1 23 516 538 516 538 0.97

16 18 4.2e-05 0.0042 17.9 1.3 2 23 545 566 544 566 0.97

17 18 2.8e-06 0.00028 21.6 3.3 1 23 572 594 572 594 0.98

18 18 2.9e-06 0.00029 21.6 0.8 1 23 600 622 600 622 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00026	0.026	15.4	1.4	1	23	33	55	33	55	0.98
2	18	2.9e-05	0.0029	18.4	4.6	1	23	61	83	61	83	0.97
3	18	7.1e-07	7e-05	23.5	0.3	1	23	89	111	89	111	0.99
4	18	0.0024	0.24	12.4	0.8	3	23	119	140	117	140	0.91
5	18	0.00025	0.025	15.5	0.6	1	23	145	167	145	167	0.96
6	18	0.00016	0.016	16.1	2.1	1	23	177	199	177	199	0.97
7	18	4.4e-06	0.00043	21.0	0.8	1	23	205	227	205	227	0.98
8	18	1.7e-06	0.00017	22.3	0.1	1	23	235	257	235	257	0.97
9	18	0.0015	0.15	13.1	0.7	1	23	345	367	345	367	0.92
10	18	3.9e-07	3.9e-05	24.3	0.8	1	23	373	395	373	395	0.99
11	18	1.2e-07	1.2e-05	26.0	0.1	1	23	401	423	401	423	0.98
12	18	0.00066	0.066	14.1	2.4	3	23	431	452	430	452	0.96
13	18	3.5e-05	0.0035	18.2	5.8	1	23	457	479	457	479	0.97
14	18	8.1e-06	0.0008	20.2	1.8	1	23	488	510	488	510	0.98
15	18	3.6e-06	0.00036	21.3	0.2	1	23	516	538	516	538	0.97
16	18	4.2e-05	0.0042	17.9	1.3	2	23	545	566	544	566	0.97
17	18	2.8e-06	0.00028	21.6	3.3	1	23	572	594	572	594	0.98
18	18	2.9e-06	0.00029	21.6	0.8	1	23	600	622	600	622	0.98

Sequence Information

Coding Sequence: ATGATGAATAATGCTCATCGGATTATTGAGTCTGCAAGGTTGATCATAATCCGGAGTATCGAATGGCTGACGGGGGCAACAGTGGCTTCGCTTGGCTTCAAGTGCGATCAGTGCGAGCGCGTTTGTCCCAGTAGGCAAGCGCTTAACAGGCACAAAATCGTTCACATCGACAGGTTTCCGCACGAGTGCGCGTTCTGCGGCAAGAAGTTCAAGAGACTCGAGGGCCTGAAGAGACACCACAAGGTGCACACCATGGAGAGGGACTATCAGTGCACCATCTGCGGACGAGCGTTTAAATTGCAGACCCAGTTGGCAGTCCACGTCAGGCGGCACGGGACCAACTACAAGCTTTTCTGCGAGTACTGCGGGAAGGGCTTCCATTCGAGGGAAGAAGTTCGAAGTCACGCGAACGCGAGGCACGGGGCGAACGAGCACGTTTGCAAAGTTTGCTCGAAAGCGTTCAGAGACGCGAGACGACTGGAGCTGCACCGTGCCGTTCACGAGCCGAACTATCAGCCCGATAAGCCGCACCAATGCGAGATATGCGGTAAAACGTTCTCGTTGTTGCGATATATGATATCGCACAGGAACAATCATTTGGAGGAGAATCACTTCGAGTGCGATATCTGTAAGAAGAAGCTCACCTCGAAGTCGTCGTTGGTAAGTCACATAAGGTTGCACAGCGGGGAGAAGCTGAAGCCATTCGCCTGTGACATATGCGGAAAGACGCTGGCGAGTAAGGGAACGTTGAAGGTGCACCAGAGGATACACACCGGCGAGAGGCCGTTCAAATCCGAAAGCGCAGTAGGGACGAACGGGACGATAATCTGCGAACAACCGAACGGGGAAACGATATCAGTACAAGATCCGATCTTTGTAAAGAAAGAGACGTACACGGACATGCCAGATGAAACTGTAGTAGATGGTGCTGTCACGATCGACGAGAAAAGTGAAGTGAAGGAGGAGGTGAAGGAGATCGAAGACGTGAAGAACTTTACGGCGGAACCGTCTAGTAACGATGCGCGAACGGTGTATCAGTGTAACGTCTGCTCAAAACGTTTTCGTCTGAAGAACCTCTTCGAAGGACACTTGGTCGCGCATAGTGACGCTCGACCTTATCAGTGCGACGTCTGTGGTAAATCGTTCAAACGAACCAACACCTTAGCCGTCCACAAGAGAATACATACCAGAGAGCGAAATTTCGTCTGCGACGTGTGCGGTCGAGCGTTCGTTCAAGCCTCACAGCTTGCCACCCATCAGCGAAGGCACTTCGAGAGATATACTAGGCACTGCGACATATGCAACAAAGGTTTCTTCACCAACGCCGAATTACACGGACACATGAACGTTAAGCACGAAGCCAAGCAACACGTTTGTCACTCGTGTAACAAATCGTTTCCGAACAATCACACTCTGGCGAGGCATCTGAAGATACACGATCCAAACTTCAAGCCCGTCAAGCATCAGTGTGAGTTCTGCGGTAAGACGTTCGCCTACAAAAACTCTTTGGTGGTGCACGTGAAGTCGCACACAGGTGACAATAAGTATGACTGCGATTTGTGCGGAAAATCAGTCTCTTCGAAGGGTTCTCTGCAAGATCATCTCAGACTGCACGGGGGAGAGAAGTCTTTGGTGTGTGACGTTTGCGGGAAGGCTTTTCATAAGAGAACGACGCTGGTTGTTCACAAGAGGACGCACACCGGGGAGAAACCGTACAGTTGCGATACCTGTGGAAAATCGTTCACTCAACATTCCACCCTGGTCATACACAAGAGATATCATACGGGTCAGAGACCGTATCAATGTAATTTCTGCAACAAATCGTTTGTGTCCAGAGCACTGTTAAACGCGCATAGTAAAGTGCACGTAGTACGTGCTATGTGA
Protein Sequence: MMNNAHRIIESARLIIIRSIEWLTGATVASLGFKCDQCERVCPSRQALNRHKIVHIDRFPHECAFCGKKFKRLEGLKRHHKVHTMERDYQCTICGRAFKLQTQLAVHVRRHGTNYKLFCEYCGKGFHSREEVRSHANARHGANEHVCKVCSKAFRDARRLELHRAVHEPNYQPDKPHQCEICGKTFSLLRYMISHRNNHLEENHFECDICKKKLTSKSSLVSHIRLHSGEKLKPFACDICGKTLASKGTLKVHQRIHTGERPFKSESAVGTNGTIICEQPNGETISVQDPIFVKKETYTDMPDETVVDGAVTIDEKSEVKEEVKEIEDVKNFTAEPSSNDARTVYQCNVCSKRFRLKNLFEGHLVAHSDARPYQCDVCGKSFKRTNTLAVHKRIHTRERNFVCDVCGRAFVQASQLATHQRRHFERYTRHCDICNKGFFTNAELHGHMNVKHEAKQHVCHSCNKSFPNNHTLARHLKIHDPNFKPVKHQCEFCGKTFAYKNSLVVHVKSHTGDNKYDCDLCGKSVSSKGSLQDHLRLHGGEKSLVCDVCGKAFHKRTTLVVHKRTHTGEKPYSCDTCGKSFTQHSTLVIHKRYHTGQRPYQCNFCNKSFVSRALLNAHSKVHVVRAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00393737;
90% Identity: -
80% Identity: -