Basic Information

Insect: Prenolepis imparis
Gene Symbol: stc
Assembly: GCA_030444845.1
Location: JAUDTA010000007.1:2253902-2258196[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 3.8e+04 -3.7 1.1 15 19 471 475 470 475 0.82

2 14 0.13 3.3e+03 -0.3 0.1 4 10 504 510 503 511 0.94

3 14 5e-06 0.13 13.8 12.9 3 18 520 535 519 536 0.92

4 14 3.8e-09 9.7e-05 23.7 17.0 1 18 572 589 572 590 0.98

5 14 2.8e-05 0.7 11.4 10.1 1 19 628 646 628 646 0.92

6 14 0.57 1.4e+04 -2.4 0.9 5 10 675 680 675 680 0.95

7 14 0.00021 5.4 8.6 11.5 4 18 693 707 686 708 0.86

8 14 2 5.1e+04 -4.6 1.6 5 10 737 742 737 742 0.90

9 14 0.0082 2.1e+02 3.5 11.3 1 11 748 758 748 770 0.88

10 14 2.3e-09 5.9e-05 24.4 11.6 1 19 775 793 775 793 0.98

11 14 2 5.1e+04 -4.4 0.8 6 10 822 826 822 826 0.89

12 14 2 5.1e+04 -5.5 7.9 10 18 840 849 838 850 0.79

13 14 5.4e-07 0.014 16.9 11.1 1 16 886 901 886 911 0.89

14 14 7.5e-06 0.19 13.2 13.6 1 19 918 937 918 937 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	3.8e+04	-3.7	1.1	15	19	471	475	470	475	0.82
2	14	0.13	3.3e+03	-0.3	0.1	4	10	504	510	503	511	0.94
3	14	5e-06	0.13	13.8	12.9	3	18	520	535	519	536	0.92
4	14	3.8e-09	9.7e-05	23.7	17.0	1	18	572	589	572	590	0.98
5	14	2.8e-05	0.7	11.4	10.1	1	19	628	646	628	646	0.92
6	14	0.57	1.4e+04	-2.4	0.9	5	10	675	680	675	680	0.95
7	14	0.00021	5.4	8.6	11.5	4	18	693	707	686	708	0.86
8	14	2	5.1e+04	-4.6	1.6	5	10	737	742	737	742	0.90
9	14	0.0082	2.1e+02	3.5	11.3	1	11	748	758	748	770	0.88
10	14	2.3e-09	5.9e-05	24.4	11.6	1	19	775	793	775	793	0.98
11	14	2	5.1e+04	-4.4	0.8	6	10	822	826	822	826	0.89
12	14	2	5.1e+04	-5.5	7.9	10	18	840	849	838	850	0.79
13	14	5.4e-07	0.014	16.9	11.1	1	16	886	901	886	911	0.89
14	14	7.5e-06	0.19	13.2	13.6	1	19	918	937	918	937	0.97

Sequence Information

Coding Sequence: ATGGCCGCCTGGGACGGCTCGTTCCAGACGGAGGATCCGACCTACTCCGCGGACAACACCTGGACGTACTTGGACGAGAGCTCGGCGAGGAGCTACCATCCCAGACCGGCAGCGGGTGCTCTCTATCGAATCGACCCTCAGCATCCGTCTAATATGGTGCCTTTAGAAAACGCTTATCAGGAACGCACACTGCCAAGCTCGTCGTCGAGTAATTCGCATCCCGTGAACGGCTTCGTCCCGGCTTCGTCGTCCCGCAACGCGCCCTTCTTCCGGGACAATTACAAGCCGAGGTCCAGGGGTAACAGAACGCTCGGCAAGCCCACCTCGTCCGAAGGCGACATTATCCGGTCCACCATAGTCCAAAACTCCAATTTACAGGCCACAGCCAACGAATTCGTGCCAAACAGCGTTAAATCGAGTAAGAGGGACAGATTTAACAAACAGGAGGATCACTACGATAATGCAACGGGAGGGAATAGCTTCGACGGACAGGATTTCAGGCCTAGATCGATCAACAAGTACTACGTATCTACGGATAATAGGTACAAAGGTGAGAGACGCTACGACAATAGGAGAGATGTAAATTATAGGCAAAAGAATTTGCAAGATGGACATACTCCAAGATCCAACTACAGGGATACTCAGAGAAGTGGGAATGGTGGGAGGAACTACAATAAATTTCAGAATggcaaatattataatagaagaCATCAGGCAGATACATTTGTAGAACAACACGCTGCTGGAAAAGCTCGTACACCTATAAACGAATATGGTAGCTCATTTACATTTGACAGACAGGAAAATAAGGCTGCTAAAGAACTTCAGGAGGATGACTTATCCTCGGATATCGGAAAAAGCGGAGGCGGGACAGGCGAGGATAATGATTCGGAGAATGTCTCCTTGAAAGCCCATGAGACACAACGAAATAGTAAACCTAAGCGATTCACTGATCAAGCTAACACGTCTaactattataaatacaacaattacaagtacaaacactattataaatacaatacgGATGATGTACCGTCCGAACCTGGTGGTAGACAGATTGCaaataaaactgcagtagCTGCTACAAAGTATATGCATAAAAGAAACAATGAAGTGACAGCGAATCACAAAGAGAAGAACTTGGAAAATTGGAGAGATAGAGCGGTAGATAACGAGGCAGCACGTGTGCAGGCAAAAGGTCTGAAGAATAAACTTAAAATCGaTGATGACGCGAGTCAAAGGGAAAGATTGACAGGGCAATTAAACAGGGGAATATTAGAATGTTTAGTCTGTTACGAGCACATCAAGCAAAGTGAATACGTTTGGTCCTGCAGTAACTGTTATCACGTATTGCACCTAAAATGCATCAAAAAATGGGCAAAATCGTCTCAGAGCGAGAACAGTTGGAAGTGCCCAGCCTGCCGAGACATTAGTCTTCTCGTACCAGAGGATTATTTCTGTTTCTGCGGGAAGAGGAAGATGCCGGAGTGGAATCGCAAGGACGTGGCTCACTCGTGCGGCGAGATCTGCGGTCGAAATCTGTCGAAGAACAATTGCACACACAAATGTACCCTGCTCTGCCATCCCGGCTCTTGTCCGCAGTGTGTGGCGATGGTGACCAAATATTGCGGCTGCGGAAGAACGTCGAAGATGCTGCTATGCAGCGCTCACCAACTGTTGCAGTGCGATTCGATATGCGAGAAAGATCTGTCGTGCGGCAAGCACACTTGTCAGAAAACATGCCATCAGGGAGAGTGCGGGCCTTGCGACGAGACCGTGCGACAGAcCTGTTTTTGTGGTAAGAAAACTCAGGAGGTACCTTGCCGAGCTAATGTCACAGATACGTATTCCTGTAATAATATCTGCAACAAACCATTGGACTGCGAGAAACATTATTGCCAACAAGTCTGCCATCTGGAGGCATGCGAGCCTTGCTCCTTGACGCCCGAGAGAATCACGACGTGCTGTTGCGGTCAAACGCCGTTGacggagaagagagagagctgCTTGGATCCTGTGCCCACCTGCGACAAAGTCTGTTCGAAGCGTCTGAAATGCGGTCAACCTAGTAATCCACACATCTGCAAGGCACCGTGCCACATCGGCGACTGTCCGGACTGTGATTTGAATACCGATGTCAAGTGCCGATGTGGTAATATGGATCGCGAGATCGCTTGCAAAGAGCTGACGAGTAAAGCCGACGACGCGCGCTGCGAGAAGCGTTGCAAGAAGAAACGATCCTGCGGCAAGCACAACTGCAATCAACTGTGCTGCATCGACATCGAGCACATCTGCCCGTTGCCGTGTTCGAAGACGTTGAGCTGCGGTCGGCACAAGTGCCAGGAAAGATGTCACATGGGGAGATGTTCGCCTTGTTGGCAGAGTAGCTTCGAAGAACTGTACTGCGAGTGCGGTGCCGAGGTAATCTATCCACCGGTACCGTGCGGTACGAGAAGGCCCGTTTGCAATCGGCCATGCTCGCGCGAGCATCCCTGCGATCACGAGGTGCTGCACAACTGTCACAGCGAGCCCGCGTGTCCGCCTTGCGGTGTGTTGACCCAGAGATGGTGCCACGGTAAGCACGAGCTCAGAAAGGCTGTGCCGTGTCACGTGAAGGAGATCTCGTGCGGTTTGCCGTGCTATAAGCCATTGACTTGTGGACGGCATAAGTGTATCACGATGTGTCACGCCGGGCCTTGCGAAAGACCCGGACAACAGTGCATGCAACCTTGCATCATTACGAGGGAGCTGTGCGGACATATCTGTGCCGCTCCGTGCCACGAAGGCAAGTGTCCGGACACGCCTTGCAAAGAGATGGTTAAGGTTACATGTCAGTGCGGACACAGGACTATGAGTCGTGTTTGCGTAGATAATGCGCAAGAGTATCAACGTATAGCCAGCAACATACTAGCCAGTAAGATGGCCGACATGCAGCTCGGGCATTCCGTCAATTTGGAGGAAGTTTTTGGACAAGGCGCGAAGAAACAGAATCAGTTAAAGACCCTCGAGTGCAACGATGAGTGCAAGACAATAGAGAGAAATAGGAGACTCGCGTTGGGACTGCAGATCGTTAATCCTGACTTGAGCGGAAAGTTGATGCCCAGATATACCGATTACATGAAACAATGGGCCAAGAAAGACCCGCACTTCTGCCAGATGATCCACGATAAACTGACGGAATTAGTCCAATTGGCGAAGACGTCTAAGCAGAAATCTCGAAGTTACTCGTTCGACGTTATGAACAGAGAAAAGCGCCATTTCGTTCACGAATCGTGCCAACATTTTGGCTGCGAGAGTCAAGCGTACGACGAGGAGCCGAAAAGGAATGTCGTCGCCACTGCTGTGAAAGATAAGTGTTGGCTACCAAGTTATAGTTTGCTGGAAATGGTGCAGCGGGAAAAAGGACAAAGAAAAGTTCCAGGACCGGTACTTAATGCTTCTAAGGGAAATAATTCCACAAAGACTGTTCTTTCGTTACCAGTAAAACAGAGTCAAAAATCACTACCATCCTCATCAACTGCAAAAACAACTGATAAAGAGATAGATTATTTTGACTATCAAGGATGA
Protein Sequence: MAAWDGSFQTEDPTYSADNTWTYLDESSARSYHPRPAAGALYRIDPQHPSNMVPLENAYQERTLPSSSSSNSHPVNGFVPASSSRNAPFFRDNYKPRSRGNRTLGKPTSSEGDIIRSTIVQNSNLQATANEFVPNSVKSSKRDRFNKQEDHYDNATGGNSFDGQDFRPRSINKYYVSTDNRYKGERRYDNRRDVNYRQKNLQDGHTPRSNYRDTQRSGNGGRNYNKFQNGKYYNRRHQADTFVEQHAAGKARTPINEYGSSFTFDRQENKAAKELQEDDLSSDIGKSGGGTGEDNDSENVSLKAHETQRNSKPKRFTDQANTSNYYKYNNYKYKHYYKYNTDDVPSEPGGRQIANKTAVAATKYMHKRNNEVTANHKEKNLENWRDRAVDNEAARVQAKGLKNKLKIDDDASQRERLTGQLNRGILECLVCYEHIKQSEYVWSCSNCYHVLHLKCIKKWAKSSQSENSWKCPACRDISLLVPEDYFCFCGKRKMPEWNRKDVAHSCGEICGRNLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHQLLQCDSICEKDLSCGKHTCQKTCHQGECGPCDETVRQTCFCGKKTQEVPCRANVTDTYSCNNICNKPLDCEKHYCQQVCHLEACEPCSLTPERITTCCCGQTPLTEKRESCLDPVPTCDKVCSKRLKCGQPSNPHICKAPCHIGDCPDCDLNTDVKCRCGNMDREIACKELTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCSPCWQSSFEELYCECGAEVIYPPVPCGTRRPVCNRPCSREHPCDHEVLHNCHSEPACPPCGVLTQRWCHGKHELRKAVPCHVKEISCGLPCYKPLTCGRHKCITMCHAGPCERPGQQCMQPCIITRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCVDNAQEYQRIASNILASKMADMQLGHSVNLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMIHDKLTELVQLAKTSKQKSRSYSFDVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMVQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQSQKSLPSSSTAKTTDKEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869301;
90% Identity: iTF_01077860;
80% Identity: -