Basic Information

Insect: Nylanderia fulva
Gene Symbol: stc
Assembly: GCA_005281655.1
Location: NW:2577376-2583040[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 1.1e+04 -3.7 1.1 15 19 466 470 465 470 0.82

2 14 0.13 9.5e+02 -0.3 0.1 4 10 499 505 498 506 0.94

3 14 5e-06 0.036 13.8 12.9 3 18 515 530 514 531 0.92

4 14 8.4e-09 6.1e-05 22.7 14.5 1 18 567 584 567 585 0.97

5 14 2e-07 0.0014 18.3 10.4 1 19 623 641 623 641 0.92

6 14 0.98 7.1e+03 -3.1 0.7 5 10 670 675 670 675 0.94

7 14 3.7e-05 0.27 11.0 11.8 4 18 688 702 681 703 0.86

8 14 2 1.5e+04 -4.6 1.6 5 10 732 737 732 737 0.90

9 14 0.0082 60 3.5 11.3 1 11 743 753 743 765 0.88

10 14 2.3e-09 1.7e-05 24.4 11.6 1 19 770 788 770 788 0.98

11 14 2 1.5e+04 -4.4 0.8 6 10 817 821 817 821 0.89

12 14 2 1.5e+04 -5.5 7.9 10 18 835 844 833 845 0.79

13 14 1.2e-06 0.0086 15.8 9.8 1 16 881 896 881 906 0.89

14 14 7.5e-06 0.054 13.2 13.6 1 19 913 932 913 932 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	1.1e+04	-3.7	1.1	15	19	466	470	465	470	0.82
2	14	0.13	9.5e+02	-0.3	0.1	4	10	499	505	498	506	0.94
3	14	5e-06	0.036	13.8	12.9	3	18	515	530	514	531	0.92
4	14	8.4e-09	6.1e-05	22.7	14.5	1	18	567	584	567	585	0.97
5	14	2e-07	0.0014	18.3	10.4	1	19	623	641	623	641	0.92
6	14	0.98	7.1e+03	-3.1	0.7	5	10	670	675	670	675	0.94
7	14	3.7e-05	0.27	11.0	11.8	4	18	688	702	681	703	0.86
8	14	2	1.5e+04	-4.6	1.6	5	10	732	737	732	737	0.90
9	14	0.0082	60	3.5	11.3	1	11	743	753	743	765	0.88
10	14	2.3e-09	1.7e-05	24.4	11.6	1	19	770	788	770	788	0.98
11	14	2	1.5e+04	-4.4	0.8	6	10	817	821	817	821	0.89
12	14	2	1.5e+04	-5.5	7.9	10	18	835	844	833	845	0.79
13	14	1.2e-06	0.0086	15.8	9.8	1	16	881	896	881	906	0.89
14	14	7.5e-06	0.054	13.2	13.6	1	19	913	932	913	932	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTTCCAGACGGAGGATCCGACCTACTCCGCGGAGAATACCTGGACGTACTTCGACGAGGGCTCGGCGAGGAGCTACCATCATCCGGGACCCGGTGCTCTCTATCGAATCAATCCTCAGCATCCGTCGAATATGGTGTCTTTCGAAAACGCTTATCAGGAACACATACTGCCAAGCTCGTCGTCGAGTAATTCGTATCCTGTGAACGGCGTCGTCCCGGCTTCATCAGGGCGCAACATGCCCTTCTACCGGGACAATTACAAGCCGAGATCCAGGGGTAATAGGAGCAAGCCCATCTCGTCCGAAGGCGACTTCGTTCAGTCAAGCATAGTGCAAAATTCCAATTTACAAGCCACAGCCAACGAATTCGTGCCAAACAGCGTTAAGTCGAGTAAGAAGGACAGATTTAACAAACAGGAGAATCATTATGATAATGCAGTGGGAGGGAATAGCTTTGATGGACAGGATTTCAGGCCTAGATCGATCAACAAATACACATCTTCAATGGATAATAGATATAAAGGTGAGAGACGCTATGATAATAGGAGGGATGTCAATTATAGGCAGAAGAATCAGCAAGATGCTCCACCAAGATCCAACTACAGGGATCAGAGAAGTGGGAACGGTGGAAGGAACTACAATAAATTTCAGAATGGCAAATATTATAATAGGAGACATCAATCGGATACATATATGGAACAATACGTTGGGAAAGCTCGTACACCTACAAACGAATACGGCAGCCCGTTTACAGTTGACAGACAGGAAAATAAGGCTTTTGCTAAGGAACTTCAGGAGGCTGATTTATCCTCCGATGTAGGTAGAAACGGAGGGACAAGCGAGAATAATGATTCGGAGAATGCATCTCTGAAAGCCCATGAGACACAACGAAATGGTAAACCTAAACGATTCAATGATCAAGCTAACACATCTAactattataaatacaacaattataaatataaacactATTATAAACAATACAATTCTGATGATGTACAATCCGAACCTGGTGGTAGAAAGATTGCAAGTAAAAGTGTGGCAGTTACTACAAAATATACGCATAAAAGAAACAATGAGGTGACAGCAAATTACAAAGAGAAGAACTTGGAGAATTGGAGAGATAGAGCAGAAGATAATGAGGCAGCTCGTGTACAGGGAAAAAGTCTAAAGAATAAACCTAAAATCGACGATGACGCGAGTCAAAGGGAAAGATTGACGGAGCAATTGAACAGAGGAATATTAGAATGTTTAGTCTGTTACGAGCATATCAAACAAAGCGAATACGTCTGGTCCTGCAGTAACTGTTATCACGTATTGCATCTAAAATGCATCAAAAAATGGGCGAAATCGTCTCAGAGCGAGAACAGTTGGAAGTGCCCAGCCTGCCGAGACATTAGCCTTCTCGTACCAGAGGATTATTTCTGTTTTTGCGGAAAGAGGAAGATGCCGGAGTGGAATCGCAAGGACGTAGCTCATTCGTGCGGCGAAATCTGCGGTCGAAATCTGTCCAAGAACAATTGCACGCATAAATGCACCCTGCTCTGCCATCCCGGCTCTTGTCCGCAGTGTGTGGCGATGGTGACGAAATATTGCGGTTGCGGAAGAACGTCCAAGATGCTGCTGTGCAGCGCTCATGAACTGTTGCAATGCGATTTGATATGCGAGAAGGATCTGTCATGCGGCAAGCACACTTGTCAGAGAAAATGCCATCAGGGAGAATGCGAGTCTTGCGACAAAACCGTGCAACAGAcCTGTTTTTGTGGTAAGAAGACTCAAGAAGTACCTTGCCGAGCTAATGTCACAGACACATATTCCTGTAACAATATTTGCAACAAACCATTGGACTGCGAGAAACATTATTGCCAACAAATCTGTCATCTGGGGGCATGCGAGCCTTGTTCCTTGACGCCAGAGAGAATCACGACGTGCTGTTGCGGTCAGACGCCATTGacggagaagagagagagctGCTTGGATCCTGTGCCTACCTGCGACAAGATCTGTTCTAAGCGTCTGAAATGCGGTCAACCTAGTAATCCACACATCTGCAAGGCACCTTGTCATGTCGGCGACTGTCCGGACTGCGACTTGAATACCGATGTCAAGTGCCGATGCGGTAATATGGACCGCGAGATCGCTTGCAAAGAGCTGACGAGTAAAGCCGACGACGCGCGCTGCGAGAAACGTTGCAAGAAGAAACGATCCTGCGGCAAGCACAACTGCAATCAATTATGTTGCATCGACATCGAGCACATCTGCCCGTTGCCGTGTTCCAAGACGTTGAGTTGCGGTCGGCACAAGTGCCAGGAGAGATGTCACATGGGGAGATGTTCGCCTTGTTGGCAGAGTAGCTTTGAAGAACTGTACTGCGAGTGCGGTGCCGAGGTGATCTATCCACCGGTATCCTGCGGTACGAGAAGGCCCGTTTGCAATCGGCCATGCTCGCGCGAGCATCCCTGCGATCACGAGGTGCTGCACAATTGTCACAGCGAGCCCGCGTGTCCGCCTTGCGGTGTGCTAACTCAGAGATGGTGCCACGGCAAGCACGAGCTCAGAAAGGCTGTGCCGTGTCACGTGAAGGAGATTTCGTGCGGTTTACCATGCAATAAGCCATTATTGTGTGGACGGCACAAGTGTATCACGATGTGTCACGCCGGGTCTTGCGAAAGACCTGGACAACAATGCATGCAACCCTGCATCATTACGAGGGAGATGTGCGGACATATCTGTGCGGCTCCGTGCCACGAAGGCAAGTGTCCGGACACACCTTGCAAAGAGATGGTTAAGGTTACATGTCAGTGCGGACATAGAACTATGAGTCGTGTTTGCGCGGATAATGCACGAGAGTATCAACGTATAGCTAGCAACATCCTAGCCAGTAAGATGGCAGACATGCAGCTCGGACATTCCGTCGATTTGGAGGAAGTTTTCGGACAAGGCGCGAAGAAGCAGAATCAGTTGAAGACCCTCGAGTGCAACGATGAATGCAAGACGATAGAAAGAAATAGGAGACTCGCGTTGGGACTGCAGATTGTTAATCCCGACTTGAGCGGCAAGTTGATGCCCAGATACACTGATTACATGAAACAATGGGCCAAGAAAGACTCGCACTTCTGCCAGATGGTCCACGACAAACTGACGGAATTAGTCCAACTGGCGAAGACATCTAAGCAGAAATCTCGAAGTTACTCATTCGACGTTATGAACAGAGAAAAACGTCATTTCGTTCACGAATCGTGCCAACATTTTGGCTGTGAGAGTCAAGCGTACGATGAGGAGCCGAAAAGGAATGTTGTCGCCACTGCTGTAAAAGATAAATGTTGGCTACCAAGTTACAGTTTATTGGAAGTGATACAGCGGGAAAAAGGACAAAGAAAAGTTCCAGGACCGGTACTTAACGCTTCTAAGGGAAATAATTCCACAAAGACTGTTCTTTCATTACCCGTAAAACAGAGTCAAAAATCAATATCATCCTCATCAACTACAAAAACACCTGACAAAGAGATAGATTATTTTGACTATCAAGGATGA
Protein Sequence: MATWDGSFQTEDPTYSAENTWTYFDEGSARSYHHPGPGALYRINPQHPSNMVSFENAYQEHILPSSSSSNSYPVNGVVPASSGRNMPFYRDNYKPRSRGNRSKPISSEGDFVQSSIVQNSNLQATANEFVPNSVKSSKKDRFNKQENHYDNAVGGNSFDGQDFRPRSINKYTSSMDNRYKGERRYDNRRDVNYRQKNQQDAPPRSNYRDQRSGNGGRNYNKFQNGKYYNRRHQSDTYMEQYVGKARTPTNEYGSPFTVDRQENKAFAKELQEADLSSDVGRNGGTSENNDSENASLKAHETQRNGKPKRFNDQANTSNYYKYNNYKYKHYYKQYNSDDVQSEPGGRKIASKSVAVTTKYTHKRNNEVTANYKEKNLENWRDRAEDNEAARVQGKSLKNKPKIDDDASQRERLTEQLNRGILECLVCYEHIKQSEYVWSCSNCYHVLHLKCIKKWAKSSQSENSWKCPACRDISLLVPEDYFCFCGKRKMPEWNRKDVAHSCGEICGRNLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHELLQCDLICEKDLSCGKHTCQRKCHQGECESCDKTVQQTCFCGKKTQEVPCRANVTDTYSCNNICNKPLDCEKHYCQQICHLGACEPCSLTPERITTCCCGQTPLTEKRESCLDPVPTCDKICSKRLKCGQPSNPHICKAPCHVGDCPDCDLNTDVKCRCGNMDREIACKELTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCSPCWQSSFEELYCECGAEVIYPPVSCGTRRPVCNRPCSREHPCDHEVLHNCHSEPACPPCGVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLLCGRHKCITMCHAGSCERPGQQCMQPCIITREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDSHFCQMVHDKLTELVQLAKTSKQKSRSYSFDVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEVIQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQSQKSISSSSTTKTPDKEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869301;
90% Identity: iTF_01255222;
80% Identity: -