Pimp015525.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prenolepis imparis
Gene Symbol
Rel
Assembly
GCA_030444845.1
Location
JAUDTA010000006.1:5940474-5946067[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-44 1.6e-39 137.0 0.2 1 168 74 263 74 264 0.90

Sequence Information

Coding Sequence
ATGCCTGATGCGTACGAGAACTTTAACATGCGGCGGAGGCGATGCGGAGTATATGTGACATTGCTAGGCAATACAGATGGTACAAGCCCATACACTAGTGGATCTCAGGGAAATACAAGCATCGCATCACCCATGTCAACATCTTCATCACCCATGCACGTCACagaagattatattaatttaaccaATGCTACAGTACAAGTACTTGGAGAATCATACATTAGTATTTTGGTGCAACCAATGGACAAATTTAGATTTCGATATAAATCTGAAATGGTAGGGACACATGGAAGTTTGTTGGGTGCATCAAATGGACGTAgacgaaataaaaacaatgtaCCTACAGTTCAATTACATAATTTTCTGGAAAAAGCGATAATACGATGCACATTGGTTACAACTGATGATGAACATATACCACATGCTCATAGATTAGTGAAACGTATGGGTACCGCAGACATAGATGATCCACATGATATGGAAGTTTCACCTGCAAATGATTTTATAGCCGAATTCAATAGTATGGGAATAATACATACtgcgagaaaaaatattaaagaagaaataGTACGAAAATTATGTGCAAAAATGTTAGAAGAACGCAAgctttcaaatattaatgctACTCTTAGTCTTCGTGATGATACACAGATTAAAGCTGATGCGGAGCATTATCAGAAGGCTATAAATTTGAATACAGTTAGCCTTTGTTTTCAAGGATTTATCAAAGATGAACATAATATCATGAGACCGATCACATCGCCGGTTTATAGCAATCCAATCAATAATCTGAaaagcgCGTTAACTGGAGAACTTAAAATATGCAGAATTGACAAATTTACCAGCAGTTGTGAAGGTGGAGAAGAAGTATTCATATTTGTAGAGAAAGTTTCAAAAAaaaatataaaaataaaattttttgaactGAATGACGATGACATTGAAGTCTGGACTGATTATGGTCGTTTTTCGGAACTAGATGTTCATCATCAATATGCTATGGCATTTCGAACTCCACCATATAAGGATCTATGTATTACTTCTCCGAAAGAAGTTTTTGTACAATTAGAACGTCCTTCAGATTCAGATTGCTCAGAACCAATCAAGTTCACATATAAGCCCAGCGATCGCATAATGGgTAGGAAGAGAACGCGAATCTCTCATTCGAGTAGCACAGAATTGACACAAATGGCGTTTAATCTAGATACGCCGTCAATTCATACACCATTAACAAATATGCCTTCAAACAATGAAAGTACAGAAATgtctaaagaaataaaaaagatgttaGACGATAGATGCTCTTCCAGTGAGTTTAAGGATTTTGTTGAACGCATAAATTTAGACTTTTATGAGAGTTTATTAACTCAAagtgaagaaaataaattagctTATGATGGAGCACCGAGTAAAAAggATGACGAAATGTTtgccaaaaatattattattgaaacaaTGAAAAGTATCAAAACAAAGCCAGATATAtctaaagatattataataaatatgttcaaaAACAGGACAACTTATGGTGATTCGGCGCTACATTATGCGCTCCGATATGGACAGAAAGATATTGTAAAGCATATCTTAATGCTTATGAGTACTCTAAAGACAAATGCTGAAGAATTagtgaatattcaaaataGTTCTGGCAAGACTCCATTGCATTACGCTGCCACGCAAGAACATGCAGAAATTACAAGAGCATTGCTCATGCTCGGTGGAGATCCAAATATATCAGATCATTATGGACAAATGCCATTACACAGAGCTGTTAAATTTCCAGAAGCGAGAGCAAGTGTTAATGTTTTATTGAGCGAAGAAAAAATCAACATTGAAGCAAATACAGATTTAGGATGGACACCTTTGCATTTAGCTGCTGAGGCGGGATCATACTATGCAGTACGTTCTCTCATTGAAGCCGGTGCAAACGTAAATAATACTGATATGTCTTATGGAAGAACGGCTTTACATGTAGCGGTCGAAGGAAGTCACAAAGATATAATAGAGTTcctgttaaaaaatACCAGCATAGATGTTAACAAGAGAAACTTCAGCGGAAATACGGCATTGCATACTGCGGTGGTTACACCTGGGACGAAAGCAAAAGAAATATGTGCTCTTCTATTGAAATACGGCGCTGATCCGTACATAAGAAATTTCAATCGCGAGTCAAGCAACATTGAAGGGGAACaagtacaaaatataaaaactgaaaTACAAGATGAAGCAGATGAAAGCATGAAAGAATCCGTCGGGCAATCATCTTTTGACTTAGCTTCAAACAAACCAGATATCTTGCAGCTCGTTTCCAGTCAAAATAATGAGTTAGAAGCAATTAAGTGTAAAGAGGAAAATATCGATGATACACAAAAAGTTTGGATGGATGCGGTCCAGGAAAAACAATTAGCGGCTATCCTAGATGAGACAAAAGGATGGAAGAAATTAGCCCgtcatttaaattttgaaaatttattgaataccTTTGAACAGAGTTCGTCCAGTTCAACGTTACTTCTTTTGAATTACATTGCTATTCAAACTAGTATATCTCTCAGCGAACTGCAAAATATACTGCAGAGTATAGGTGAAGAAGATGCTGCTGTATATATGGAACAAGTGTTATCTATACATGAAAATACGAGTCACGcgcttttaaaataa
Protein Sequence
MPDAYENFNMRRRRCGVYVTLLGNTDGTSPYTSGSQGNTSIASPMSTSSSPMHVTEDYINLTNATVQVLGESYISILVQPMDKFRFRYKSEMVGTHGSLLGASNGRRRNKNNVPTVQLHNFLEKAIIRCTLVTTDDEHIPHAHRLVKRMGTADIDDPHDMEVSPANDFIAEFNSMGIIHTARKNIKEEIVRKLCAKMLEERKLSNINATLSLRDDTQIKADAEHYQKAINLNTVSLCFQGFIKDEHNIMRPITSPVYSNPINNLKSALTGELKICRIDKFTSSCEGGEEVFIFVEKVSKKNIKIKFFELNDDDIEVWTDYGRFSELDVHHQYAMAFRTPPYKDLCITSPKEVFVQLERPSDSDCSEPIKFTYKPSDRIMGRKRTRISHSSSTELTQMAFNLDTPSIHTPLTNMPSNNESTEMSKEIKKMLDDRCSSSEFKDFVERINLDFYESLLTQSEENKLAYDGAPSKKDDEMFAKNIIIETMKSIKTKPDISKDIIINMFKNRTTYGDSALHYALRYGQKDIVKHILMLMSTLKTNAEELVNIQNSSGKTPLHYAATQEHAEITRALLMLGGDPNISDHYGQMPLHRAVKFPEARASVNVLLSEEKINIEANTDLGWTPLHLAAEAGSYYAVRSLIEAGANVNNTDMSYGRTALHVAVEGSHKDIIEFLLKNTSIDVNKRNFSGNTALHTAVVTPGTKAKEICALLLKYGADPYIRNFNRESSNIEGEQVQNIKTEIQDEADESMKESVGQSSFDLASNKPDILQLVSSQNNELEAIKCKEENIDDTQKVWMDAVQEKQLAAILDETKGWKKLARHLNFENLLNTFEQSSSSSTLLLLNYIAIQTSISLSELQNILQSIGEEDAAVYMEQVLSIHENTSHALLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01077246;
90% Identity
-
80% Identity
-