Basic Information

Insect: Portevinia maculata
Gene Symbol: -
Assembly: GCA_949715645.1
Location: OX454526.1:11326237-11329470[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00018 0.076 16.0 1.1 2 23 397 418 396 418 0.97

2 16 1.5e-05 0.0065 19.4 1.1 1 23 424 446 424 446 0.98

3 16 6.7e-05 0.028 17.3 0.2 1 23 452 475 452 475 0.98

4 16 7e-05 0.029 17.3 3.5 1 23 490 512 490 512 0.98

5 16 0.00011 0.044 16.7 0.2 1 23 545 567 545 567 0.97

6 16 8.4e-05 0.035 17.0 1.8 1 23 573 595 573 595 0.98

7 16 9.2e-06 0.0038 20.1 1.0 2 23 709 730 708 730 0.97

8 16 5.3e-06 0.0022 20.8 3.1 1 23 736 758 736 758 0.98

9 16 3.8e-05 0.016 18.1 0.7 1 23 764 787 764 787 0.98

10 16 0.0002 0.085 15.8 1.2 1 23 798 820 798 820 0.98

11 16 0.001 0.42 13.7 0.4 1 23 832 854 832 854 0.98

12 16 0.13 56 7.0 2.5 1 23 860 882 860 882 0.94

13 16 2.5e-05 0.01 18.7 0.3 2 23 888 910 887 910 0.95

14 16 0.077 32 7.7 1.2 1 23 918 941 918 941 0.95

15 16 0.0011 0.46 13.5 0.4 3 23 951 972 950 972 0.93

16 16 0.00096 0.4 13.7 2.1 2 23 978 999 977 999 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00018	0.076	16.0	1.1	2	23	397	418	396	418	0.97
2	16	1.5e-05	0.0065	19.4	1.1	1	23	424	446	424	446	0.98
3	16	6.7e-05	0.028	17.3	0.2	1	23	452	475	452	475	0.98
4	16	7e-05	0.029	17.3	3.5	1	23	490	512	490	512	0.98
5	16	0.00011	0.044	16.7	0.2	1	23	545	567	545	567	0.97
6	16	8.4e-05	0.035	17.0	1.8	1	23	573	595	573	595	0.98
7	16	9.2e-06	0.0038	20.1	1.0	2	23	709	730	708	730	0.97
8	16	5.3e-06	0.0022	20.8	3.1	1	23	736	758	736	758	0.98
9	16	3.8e-05	0.016	18.1	0.7	1	23	764	787	764	787	0.98
10	16	0.0002	0.085	15.8	1.2	1	23	798	820	798	820	0.98
11	16	0.001	0.42	13.7	0.4	1	23	832	854	832	854	0.98
12	16	0.13	56	7.0	2.5	1	23	860	882	860	882	0.94
13	16	2.5e-05	0.01	18.7	0.3	2	23	888	910	887	910	0.95
14	16	0.077	32	7.7	1.2	1	23	918	941	918	941	0.95
15	16	0.0011	0.46	13.5	0.4	3	23	951	972	950	972	0.93
16	16	0.00096	0.4	13.7	2.1	2	23	978	999	977	999	0.97

Sequence Information

Coding Sequence: ATGTCTGTCAAGCTGGACGATACCGTGTGCCGCGTATGTTTGAGTTCCTCGGGGAACATACCGATCTTTGATGGATGCGGCAAGGATGATCAATTTCGTTACTGCACTTCTTTGGAGGCTAACATGGACGATGGACTTCCGTCTAAGTTGTGCAAGAAGTGCAACGATCATTTGAAGGTTGCCTATGATTTTCGATTCCAAGCAATTTATGCCGagaaatattttcgaaaaactATATTCTTGCCATCGCTTAAAAAAGAGGAAAATGGAGCAGTTGCGTTTATTTCAGACGAGCGCAACTGTACCGACGAGCTGGATGAAAACATGGCTGAGATCGACATGTTGCTAGCAATACACACGGAAGCAGTTGAAGAGGCGTGTGACGATGATAATGACGAGCTGAATAATTCAGGGTTCTACGACGACGATGACAGTATCGATGATAATGAGAAACAAGTggaagtccttggcatagacACGTTTGACAAGGAGCAGCGTGAACAGAAGGAGCAGAAGGTCAAAATCGAAATCGCAAATGTCCCGCCGCCGCTGGTGTCATCAATGGCGGCAAACACAGCGTATGTGCCTTCGACTGCATTGGTAGGAATGACTATGGAGTCACCACAGCCCACAGTGAGTAATAATGGCGCAGTGCCGCCGAATGTGGAAATGAATGAACTTCCGCAGTATACGACTCACAGTCCTTATTCCACGCAGTCTTCGCAGGATATGCGTATGGAACATGAAGGTGGTCGCTCCCTGCAATTGGAAATAATTCCAATCATGAAGAATGATTTGTCTACGTATGACTACAGCACCACTGCGGCCTCGGGCGAAAACTATGAGGCCTATAGTGCGCCGACGCAAACACAGTATCAGCAGCAAATGCCCATGCATCTTCAATACGAACAGCAATCCACGTCCTTGCCACTACACGAATCCGGCTCTGCGGTAGAAAATTACGAATTTGCATATCAACCGGAGTTCCAAACGTATGCTtcccaaacaaacaaaatgcaacCTGAGGACCAGCCAATTACCACAATTCCGCAGAAGCAGTCGGAACACGTCGTTGCTGTTGTAACCGAAATTCAATCGGAAACCATTACAAAGACTGAAAATGAAAATCCCAAGGTAAAGAAAAAGGTTAAACGAGACACATCCGGGCGCAGGGACAAGTGCAGGATAGAGTGCAATATCTGTGGAAGTATTTTCACGCATTTGAACTCGCTAAAGACCCATCTCTTGAAGCACTCCGGCGAAAAACCCTTCAAATGTGAGTTCTGCGACAAAGCGTTCGCCAGAAAGACCGTCCTCAACATTCACCGTCGGCTGCACACCGGCGAGAAACCCTACAAGTGTTCCTTATGCCCAAGTGCCTATGTGACTAAGGAAGCTCTAACGcgTCATATTCAAAAGGATCATGAACAGGAAGTTGGAGTCAATTTTCGCAAAGATAAGGTTTCCTACATCTGCTCAGTTTGTAACAAGTCGCGCTGCTCGAAGTACTCGCTGGCGTCGCACATGAAGACGCACTTGAATGATGCCAGGTCCCGGCGGAAGATTGTAAGGCGGAAAAAGGAAAAGTCAGACGGCTGTAACGGCATCGTGACGAACAGTGTTCCTCTGAAGTACTCGTGTAAAGTCTGCCAGAAGGGTTTTCCCAACAAATGGGAACTCAGCACCCACGCCGAGTCGCATGACATGAACAAGACGTTCGAATGCGACGTCTGTCAGCGAACATTTGAAAAGAAGTTCCAATTGCTATACCACCTGCAGACGCACGATGGCGGCGACGAGCTGGTGAAAGCTAAGGTGCAACCGAGCGCAGAGAAATCAGTGCAAAGCAAGACAGTTGTATCAAgagaaaaagaagataaaaagTCTCCGGCTGCCGAGAAGAAAGCGAAAAGAAAGCTCTCCAAGAGGAAGCCAcgcaaaagaaaagcaaaaattgtGCACGAGGATAGTGATGAGGGAGGTGAGGCACCGGAAGCGGACGAAAATGACGATGACAACGACGACAAAGACTTCAAGCTGGCAACGATGGAAAAGTTCACGAAAAAGAGATCAACTCGGGCGCAACGCGAGAACCTCAAGGCACTACGAGCCAGTAGCAAGATTGAATGCCACATATGCGAGGCAGTATTTACTCATCCCACGTCGCTGAAGACGCACATGCTGGTGCATTCGGGTGAGCGTCCTTTCAAGTGCGATCATTGCGACAAATCGTTTGCAAGGAAAACCGTTCTCAACATCCATCGAAGGCTGCATACTGGCGAGAAGCCCTACAAGTGTCCGCTCTGCGATAGTGCCTGCGTCACTAAGGATGCTCTAATGcgTCACATGTCGAAAGATCACGACGACGACAGGGAAGCTGATCGAATCAAGTTCACTTGCGGCATTTGTCACAAAGCAATGGGCACCAAGTACTCCCTTCAAGCGCATATGAAACTCCACGAACAGTACTCAACAACGGAGACTGAAGTCAAGTTTTCGTGCAACACTTGTATCGAGTCCTTTGACAACAAATCGGACTACGCCCAACACATGGAGGTGCACGATTCGCATCGCAATTTTCAATGTGACATATGCCAGGCTACATTTGAGAAGAAATTTAAGCTGCTCTTCCACTTTCAGACACACAAAATCGAAGACTTGCCATGCAAAAAATGCGGAGAGACATTCACAATAAGAGAAAACCTTATCCAACACATAAAGCTGCAGCATATGGATCCTCGGAACATGGACTTCCAGTGCCCGCATTGTAATATCGGACAATACGATACCCGTGATCTGAAGCTGCACATGTTGAATACCCACGATGTTATCATGGGCGGCTTAAATGCCTGCGATCTGTGCGGTGAGACCTATTCCACTGCAGCAGAGTACTACAAACACATGCACGATAAGCATGACACAATCAGCAAGACATGCAACGAATGCGAGAAGTACTTCGACTCGAGGAAAACATTTGATAAGCACATATTGACACACTATATGTAG
Protein Sequence: MSVKLDDTVCRVCLSSSGNIPIFDGCGKDDQFRYCTSLEANMDDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSLKKEENGAVAFISDERNCTDELDENMAEIDMLLAIHTEAVEEACDDDNDELNNSGFYDDDDSIDDNEKQVEVLGIDTFDKEQREQKEQKVKIEIANVPPPLVSSMAANTAYVPSTALVGMTMESPQPTVSNNGAVPPNVEMNELPQYTTHSPYSTQSSQDMRMEHEGGRSLQLEIIPIMKNDLSTYDYSTTAASGENYEAYSAPTQTQYQQQMPMHLQYEQQSTSLPLHESGSAVENYEFAYQPEFQTYASQTNKMQPEDQPITTIPQKQSEHVVAVVTEIQSETITKTENENPKVKKKVKRDTSGRRDKCRIECNICGSIFTHLNSLKTHLLKHSGEKPFKCEFCDKAFARKTVLNIHRRLHTGEKPYKCSLCPSAYVTKEALTRHIQKDHEQEVGVNFRKDKVSYICSVCNKSRCSKYSLASHMKTHLNDARSRRKIVRRKKEKSDGCNGIVTNSVPLKYSCKVCQKGFPNKWELSTHAESHDMNKTFECDVCQRTFEKKFQLLYHLQTHDGGDELVKAKVQPSAEKSVQSKTVVSREKEDKKSPAAEKKAKRKLSKRKPRKRKAKIVHEDSDEGGEAPEADENDDDNDDKDFKLATMEKFTKKRSTRAQRENLKALRASSKIECHICEAVFTHPTSLKTHMLVHSGERPFKCDHCDKSFARKTVLNIHRRLHTGEKPYKCPLCDSACVTKDALMRHMSKDHDDDREADRIKFTCGICHKAMGTKYSLQAHMKLHEQYSTTETEVKFSCNTCIESFDNKSDYAQHMEVHDSHRNFQCDICQATFEKKFKLLFHFQTHKIEDLPCKKCGETFTIRENLIQHIKLQHMDPRNMDFQCPHCNIGQYDTRDLKLHMLNTHDVIMGGLNACDLCGETYSTAAEYYKHMHDKHDTISKTCNECEKYFDSRKTFDKHILTHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00724957;
90% Identity: -
80% Identity: -