Pmac097686.1
Basic Information
- Insect
- Portevinia maculata
- Gene Symbol
- Foxk1_1
- Assembly
- GCA_949715645.1
- Location
- OX454529.1:12517972-12522664[+]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-40 3.2e-36 125.8 0.3 1 86 464 549 464 551 0.97
Sequence Information
- Coding Sequence
- ATGACGGATAATAACAATTCTTATCAGGTACAACATCAGGACAAATCACCAGTTAACTCTCCCATCATCCACCATCAGTCGCCGAACCACGCTGTTGTGATTAAACAGGAACACTTGGTACACGACTATATTGAGGAGAGCCCTCCGCCGACTACGTCTTACTCGCGTAAGCAGAACTTTTCAAAGTCGCCAACCATTGACCAACAAAAGCAGCAGCAAGATCTACTTAGCTCACCAAACGAACATCAACAGCACAATTATTCATCAAACATCTATCAGGAGAGAGTGACAACATCGGGTGTATCCTCGCCGGAAATACGAGGCATTGAACGTGCAggcggaggaggaggaggaggaggtagTGGCGGTAACGATAGTGGCTGGAACGATGCCGATGAGGATAATGACAACAGAAGTTCTCCAAACGTCACATCCAGTCGAACAGAGAGCAGCACTGCTGGTGGCAGGATCTATTTAAACACCTCCAATAGTAGCAACAATCGTGCGCGAATTTCATCATCGCCGCTCCCGCCACCGCCACCGGCGCACTCGTACTCCCGTCTACCGGTTCAACAGAGCGCCAACAACAGGAATCGAGTCTCGCCAACCAACTGGCATCAGCCACAAAATCAACTTGACTATATCCACCAGCAACAGCATCACCAGCAGCTAATAGTTAACGACGAAATGCTGCAAGCTCAACAGAGCCACATGCAACAGGCTCCCAATAATGCATGCGGCATGCTGAAGCACGAGAATGACATCCTTTACATTACAGAAAACTGTATAGAAATCGGACGAAATTCTTCCACTTCGCATGTTCACTTTCATGTCGCCCGCAATAGTTTTGTCTCGCGCAAACACTTTCAGGTACTCTATGATCCAGATACTTGCGACTTTTATGTCGCCTGCCTGAGTAAGAATGGGGTGTTTGTGGATGACGTTTTCCAGCGACGATACGCTGAACCaatgaaattaccaaaaagttgttcCTTTCGATTTCCGAGCACAGAAATAcgaattttatttgaaagtttTGTCGATTCAACATCATCCTTGCATGCAAATACAATAGTTTCTACAAACAGTGCACCCACCAGTAATAGCTCGTCGAAAATGCATTATTTCTCTGATCGCAAGAATCTAAATGCAACATCAATTGAAGGCTCAAATGTGATATATTCACCATTGAAAATTTCAATACCCAAAACTGAACAGAAAAGTCCATATCCTTCGCCCACCGGTACAATTAGTGCTGCAAACAGTTGCCCTACAAGTCCACGACAAGGTTTTCAAGACTATCAAAGCTACAGTAGTTATACCAATAACAACAACTTGCAAGGCCAAGAGCTGTTTCAAACTCCATCAACTTCCAATTACAATGACCATGAAAAGCCACCATACAGCTATGCCCAGCTAATTGTTCAATCAATATCTGCAGCGCCCGACAAGCAGCTTACATTATCCGGGATTTATTCcttcatttcaaaacattatCCATACTACCGCAAAGAAGCCAATAAGGGTTGGCAGAATTCAATTCGTCATAATCTCAGTTTAAACAGATATTTCATAAAAGTTGCACGATCTCAAGATGAACCAGGCAAAGGTAGCTTTTGGCGTATTGATCCTACCAGTGAAGCTAAGCTAATTGACCAAAGTTATAAAAAACGCCGACAACGCGGCAGTCAATGTTTCCGACCATCATACGGTATGCCGCGATCAGCGCCTGTTTCACCAAGCCACATTGATAATTCTCGTGAAAGCTCCCCGCTGCATGATATTGTCTTGCAGTCAGCACCTGGCTCTCCAGGAATTTCTTATCAGGGTCATTTGGAAAACCATTCAGCGGAAGACTTGATGTACAGCTCTCAACCTGTTATCCAACCATCATCCTACAATGCACATAGTCAATATAGCTCAAGCGGACAACAGCAATCGATAATCGTATCAACTTCTGGACAAATAACAAACAATGGCAATGGTAACAACGTCAATGGGGGAAGTACTTTAATTGCCATCAAACGGCATCATTCAGCAACCGTGACATCTGCGCAATCACACGCCCCCGGTAGTACGCAACATCATCAAGATACTACTTATGACGACGGGCAAGAGTACAATAGTGGAGCTGGCGGTCCCGCCATCGATAGTGGCGACGAATGCGATACTATGAAACGGCCAAAATACGCTCCTGACATGAATCAGTAG
- Protein Sequence
- MTDNNNSYQVQHQDKSPVNSPIIHHQSPNHAVVIKQEHLVHDYIEESPPPTTSYSRKQNFSKSPTIDQQKQQQDLLSSPNEHQQHNYSSNIYQERVTTSGVSSPEIRGIERAGGGGGGGGSGGNDSGWNDADEDNDNRSSPNVTSSRTESSTAGGRIYLNTSNSSNNRARISSSPLPPPPPAHSYSRLPVQQSANNRNRVSPTNWHQPQNQLDYIHQQQHHQQLIVNDEMLQAQQSHMQQAPNNACGMLKHENDILYITENCIEIGRNSSTSHVHFHVARNSFVSRKHFQVLYDPDTCDFYVACLSKNGVFVDDVFQRRYAEPMKLPKSCSFRFPSTEIRILFESFVDSTSSLHANTIVSTNSAPTSNSSSKMHYFSDRKNLNATSIEGSNVIYSPLKISIPKTEQKSPYPSPTGTISAANSCPTSPRQGFQDYQSYSSYTNNNNLQGQELFQTPSTSNYNDHEKPPYSYAQLIVQSISAAPDKQLTLSGIYSFISKHYPYYRKEANKGWQNSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPTSEAKLIDQSYKKRRQRGSQCFRPSYGMPRSAPVSPSHIDNSRESSPLHDIVLQSAPGSPGISYQGHLENHSAEDLMYSSQPVIQPSSYNAHSQYSSSGQQQSIIVSTSGQITNNGNGNNVNGGSTLIAIKRHHSATVTSAQSHAPGSTQHHQDTTYDDGQEYNSGAGGPAIDSGDECDTMKRPKYAPDMNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00724576; iTF_00310817; iTF_00315745; iTF_00313253; iTF_00312394; iTF_00314955; iTF_00311608; iTF_00314073; iTF_01520774; iTF_01522370; iTF_01521684; iTF_00671409; iTF_00240469; iTF_00310025; iTF_01541963; iTF_01541235; iTF_01223192;
- 90% Identity
- iTF_00724576;
- 80% Identity
- -