Pjap030621.1
Basic Information
- Insect
- Popillia japonica
- Gene Symbol
- dsx
- Assembly
- GCA_004785975.1
- Location
- SMLS01039283.1:95-515[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-24 4.3e-20 72.1 14.9 2 47 25 70 24 70 0.97
Sequence Information
- Coding Sequence
- ATGTCCGACTCGCAAGATTACGAAACTAAAATGGACCTGAACGCTTCCAGCACTTCGTCGACACCTAGGACGCCGCCGAATTGTGCCAGATGCAGGAATCACCGCCTGAAGATCGCCCTGAAAGGGCACAAACGTTACTGCAAGTACAGACATTGTAAGTGCGAAAAGTGCCGCTTAACGTCCGAACGTCAAAGGGTTATGGCGATGCAAACGGCCCTTAGAAGGGCTCAAGCACAGGACGAGGCGATGCTCAGGCAGGGAGTGATACCACCCCCGCAAAAAAGTCCGGCGCCGGTTCACGTACCGGATCGGAATTTTGACTGTGATTCTCCCGGATCATCGTCGACGCCTTCGTTTCCGGATGTCACCCGGAAAAGTCACGTGGAACCGGTGACCCCTCGAGAATCTGTAGGAAACAATG
- Protein Sequence
- MSDSQDYETKMDLNASSTSSTPRTPPNCARCRNHRLKIALKGHKRYCKYRHCKCEKCRLTSERQRVMAMQTALRRAQAQDEAMLRQGVIPPPQKSPAPVHVPDRNFDCDSPGSSSTPSFPDVTRKSHVEPVTPRESVGNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00068072; iTF_00627235; iTF_01498913; iTF_00626223; iTF_01120895; iTF_00434144; iTF_01258053; iTF_00464886; iTF_00466225; iTF_00740860; iTF_00137965; iTF_00981032; iTF_00307925; iTF_01123747;
- 90% Identity
- -
- 80% Identity
- -