Prid012492.1
Basic Information
- Insect
- Polyploca ridens
- Gene Symbol
- stc
- Assembly
- GCA_951394255.1
- Location
- OX596252.1:4181981-4194663[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 3.2e+04 -4.1 1.6 15 19 454 458 453 458 0.81 2 13 0.041 6.7e+02 1.3 1.4 2 10 486 494 486 494 0.92 3 13 3.1e-05 0.5 11.3 18.1 4 19 502 517 500 517 0.93 4 13 1.7e-08 0.00028 21.7 12.4 1 18 553 570 553 571 0.97 5 13 0.0018 29 5.7 16.0 1 19 620 638 620 638 0.99 6 13 2.2e-05 0.35 11.8 10.0 1 19 679 701 679 701 0.87 7 13 2 3.3e+04 -5.0 2.2 6 10 731 735 731 735 0.94 8 13 0.11 1.8e+03 -0.1 10.5 1 12 741 752 741 752 0.94 9 13 0.37 6.1e+03 -1.8 0.9 4 10 756 762 755 762 0.92 10 13 7.8e-08 0.0013 19.6 12.3 3 19 770 786 768 786 0.92 11 13 0.0075 1.2e+02 3.6 14.6 9 18 832 841 825 842 0.82 12 13 6.5e-08 0.0011 19.8 15.2 1 17 878 896 878 902 0.83 13 13 0.049 8e+02 1.0 9.1 1 12 908 918 908 931 0.77
Sequence Information
- Coding Sequence
- ATGTCCCAGTGGAACAATTCATTCACTTACAACCAGTATCAAGGTGCTAACGGCTGGAATGGTGACCCAAATAGCCAGTATATGAACCAAGCCTACTATGCCAATAGGCAAGAACCTAGCAATCAATATGTGAGCTTTAACGAGTTTCTGACGCAGATGCAGGGTACCAGTACCATGCAACCAAATACTGCCAATTATAACCAAGCTCAATTTGAGAACTACCCTACAAACCAGTATGAATATCAAAATATACCATCTACCTCTCAGAATAATAGTTACAATTATACAGCAAACACTCCTAATGTCTCCAATAGTTCAGATAATTACCAAGCACAGCAACAATATAATACTTTGCCTGATCAAAATTCTTATACAAATGAAATAATACTCAAGTCTAATCTCACACCAACAGCTATGGAATTTGTGCCAAAAAGTGCTGCAGTGCAACCATCCAGTAGTAGTCAGAACATTCCAGAACGAGCACAGCCTAGCCATGCCAGTAGCAATGGTGGAAATGAACCAAGAAGTCACCACAGCAATTCTTCAGAGACTAACTGGAGAGAAAGACCAACAGGCTCCCAAAATGGTGAAGGTTCACAGAAATTTGAATCAAATGGTCGTTCACAGGAAAACTATAGAAGTCAGGAGAATGGTCGCAATAGGGACTCAAACCACCGCAATAATGAGTCAAATAGTCGTTATTATGAATCAAACCGTAACACTGATTCAAATAACAGAAACTATGAAAGTGGCAGCCGTAATCAAGAATCAAACAATCGTAGCTATGATCCCAACACCCGTAGCCATGAATCTAATACTCGCAGTAGTGAGACAAATAGCCGTTTTGAAAATCGCAATGACAAGAGAAATCAATCTAAACAAAACTCAAAGGTGAAGGGTAAAGATTCAGATGCTCGCACATTCTACAATAGTTCAATCAATAAAGATAGTCAAGATGTGAGGAACGGGAGAAGTGAAGGTGGCAGCCGTAACAGAAACTGGGCTGGGAGCCAAAGACTTAAAGCCACTGAACGTAATAGTGTAGAAGATGAAGAGTATGCGAATACATATTTGCAGCGCAAAGATGAGAAGTTAGAGAGAGTATCAAAAGCTAAGAATGTCCAATCCAGTCCATCTAGATTTAAAACTAAAGCATCATCAGATCTAGCTATCACTGAAATGACACAGCGTGAACGATTGACGGAGCAGCTAGACAAAGGCACACTAGAGTGCCTCGTGTGCTGCGAGCGCGTCAAACAAACGGACTCTGTGTGGTCTTGTAGCAACTGTTACCATGTGTTGCACCTAAGGTGTATCAGAAAATGGGCCATGAGCAGTATGGTTGAGGGTAAATGGCGTTGCCCAGCATGTCAGAACACAAGCTCGGACATTCCCACCGAGTACCGGTGCATGTGCGGCGCGGTACGTTCCCCGGAGTACCAGCGCGGGGTGGGCGGCGCCCACACGTGCGGGAAGGCTTGCCGGAGAGTACGCGCCTGTCCGCATCCTTGCACGCTTCTGTGCCACCCTGGACCTTGTCCGCCTTGTCAGGCTACTGTTCACAAACAATGCGGGTGCGGCGCTGAGACTCGTTCGGTGTTATGCAGCAGTAAGCTGCCTCAAGTGTGCGGGCGCGTGTGTCAACGCACGCTCGAGTGTGGCGTCCACACCTGTGCCAAGGAGTGCCACGAGGGGCCCTGCGATAATTGTGATGAAACTATCGAGCAAGTGTGCTACTGTCCGGTGGGCAAGTCCCGGGAGGTGGCGTGCACGGTGCAAGCCCAGTCGTCTTGCGGCGAGGGGTCGGGGTCGGGGTCGCGCTGGTCGTGCGGCGCGCAGTGCTCGCGCGTGCTCGCGTGCGGAGCTCACGTGTGTCGCGACCTCTGCCATCCGCCGCCCTGCCACAACTGTCCGCTGCTGCCCGATACTGTACTCACGTGCCCCTGTGGAAATACTAGGTTAGACAAAGGTCAACGCAAATCATGCACAGACCCTATACCCCTCTGCGGGAACATTTGCGCGAAGCCGCTGCAGTGCGGTCCCGCCGGGGACAAACACTTCTGCAAACTCAATTGTCATGCAGGTGCGTGTCCCGTATGCCCTGAGAAGACCGTTCTGCAATGCCGGTGCGGCCACTCGAGCCGCGAAGTGCCGTGCGCTGACCTGCCAGAGATGTACAACAACGTGCTGTGTCAGAAGAAGTGTAATAAGAAGTTGTCGTGCGGCCGTCACCACTGCCGCACGGTGTGCTGCGACTCGCGCGCTCACCGCTGCCTCGTGACGTGCGCGCGCTCGCTGCCGTGCCAGCTGCACCGCTGCGAGGAGCTCTGCCACACCGGCCGATGCGCGCCCTGCCCTAGACTCAGTTTCGAGGAGCTGACGTGTGAGTGCGGCGCCGAGGTGGTCCTGCCTCCCATACGCTGCGGCACCAAGCCCCCCGCGTGCACCGCGCCCTGCCGCCGCGAGAGACCCTGCGGACACCTGCCGCACCACTCGTGCCACTCCGGGGACTGTCCGCCCTGCGTCGTGCTCACCGCCAAGCACTGCCATGGACGTCACGAGGAACGCAAAACGATACCGTGTTCGCAAGAGGAGTTCTCGTGCGGTCTGCCGTGCGGCAAACCGCTGCCCTGCGGCAAGCACACCTGCACCAAGACATGCCACAAGGGACCATGTGATGCTGGCAAGTGTACCCAACCGTGCAACGAGAAGCGTCCGAGCTGCGGTCACCCGTGCGCGGCGGCGTGCCACGTGGCGGCGGGCACGAGTTGCCCCAGCGGCGCGCCGTGCCGCCGCCCCGTGCGGGCCACCTGCCTCTGCGGCAGGCGGCACGCCGACAGACCCTGCTGTGATAACTCGCGGGACTACACCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTGTATTTAA
- Protein Sequence
- MSQWNNSFTYNQYQGANGWNGDPNSQYMNQAYYANRQEPSNQYVSFNEFLTQMQGTSTMQPNTANYNQAQFENYPTNQYEYQNIPSTSQNNSYNYTANTPNVSNSSDNYQAQQQYNTLPDQNSYTNEIILKSNLTPTAMEFVPKSAAVQPSSSSQNIPERAQPSHASSNGGNEPRSHHSNSSETNWRERPTGSQNGEGSQKFESNGRSQENYRSQENGRNRDSNHRNNESNSRYYESNRNTDSNNRNYESGSRNQESNNRSYDPNTRSHESNTRSSETNSRFENRNDKRNQSKQNSKVKGKDSDARTFYNSSINKDSQDVRNGRSEGGSRNRNWAGSQRLKATERNSVEDEEYANTYLQRKDEKLERVSKAKNVQSSPSRFKTKASSDLAITEMTQRERLTEQLDKGTLECLVCCERVKQTDSVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTSSDIPTEYRCMCGAVRSPEYQRGVGGAHTCGKACRRVRACPHPCTLLCHPGPCPPCQATVHKQCGCGAETRSVLCSSKLPQVCGRVCQRTLECGVHTCAKECHEGPCDNCDETIEQVCYCPVGKSREVACTVQAQSSCGEGSGSGSRWSCGAQCSRVLACGAHVCRDLCHPPPCHNCPLLPDTVLTCPCGNTRLDKGQRKSCTDPIPLCGNICAKPLQCGPAGDKHFCKLNCHAGACPVCPEKTVLQCRCGHSSREVPCADLPEMYNNVLCQKKCNKKLSCGRHHCRTVCCDSRAHRCLVTCARSLPCQLHRCEELCHTGRCAPCPRLSFEELTCECGAEVVLPPIRCGTKPPACTAPCRRERPCGHLPHHSCHSGDCPPCVVLTAKHCHGRHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCTKTCHKGPCDAGKCTQPCNEKRPSCGHPCAAACHVAAGTSCPSGAPCRRPVRATCLCGRRHADRPCCDNSRDYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01083920;
- 90% Identity
- -
- 80% Identity
- -