Odup009117.1
Basic Information
- Insect
- Ochropacha duplaris
- Gene Symbol
- stc
- Assembly
- GCA_951361185.1
- Location
- OX592698.1:10117919-10128671[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 2.7e+04 -4.1 1.6 15 19 448 452 447 452 0.81 2 14 0.057 7.8e+02 0.8 1.7 2 10 480 488 480 488 0.92 3 14 0.00022 3.1 8.5 21.7 2 19 494 511 493 511 0.90 4 14 1.3e-08 0.00018 22.1 11.3 1 18 547 564 547 565 0.98 5 14 4.8e-05 0.65 10.7 12.7 1 19 617 635 617 635 0.99 6 14 2.3e-05 0.31 11.7 10.2 1 19 676 698 676 698 0.87 7 14 2 2.7e+04 -5.1 2.2 6 10 728 732 728 732 0.94 8 14 0.067 9.2e+02 0.6 9.1 1 12 738 749 738 749 0.94 9 14 0.63 8.7e+03 -2.5 0.7 4 10 753 759 752 759 0.83 10 14 8e-08 0.0011 19.5 12.3 3 19 767 783 765 783 0.92 11 14 0.0077 1.1e+02 3.6 14.6 9 18 829 838 822 839 0.82 12 14 6.2e-09 8.4e-05 23.1 11.3 1 17 875 893 875 895 0.88 13 14 0.31 4.3e+03 -1.5 0.5 5 10 893 898 892 898 0.93 14 14 0.0026 36 5.1 11.9 1 19 905 922 905 928 0.82
Sequence Information
- Coding Sequence
- atgtcccAGTGGAACAATTCACACGCTTACAACCAGTACCAAGGTGCTAACAGCTGGAATGGTGACCCAAATAGCCAGTACATGAACCAAGCCCATTATGCCAATAGACAAGAACCTAGCAATCAATACGTGAGCTTTAACGAGTTTCTGACTCAAATGCAGGGCACCAGTGCTATGCAGCCAAGTACCACCAATTATAATCAAGCTCAATTTGAGAACTACCCTACAAACCAGTATGAATATCAAAATATGCCATCATCCTCTCAGAATGATAGTTACAATTACACATCAAACACTCCTAATGTCTCCAATGGATCAAATAATTACCAAGCACAGCAACAATACAACACTTTGCCTGATCAAAATTCATATCCAAATGAAATAATACTCAAATCTAATCTCACACCAACAGCTATGGAATTTGTGCCAAAAAGTGCAGCAGTGCAACCTTCCAGTACTCAGAACATTCCAGAACGAGCTCAGACAACCCAGAGTAGTAACATTATTGGGAATGAAATAAGGAGTCACCAGAGTAATTCTTCGGAGACCAACTGGAGAGAAAGACCAACAAGCTCCCAGAATGGTGAAGGGTCACATAAATATGATTCAAATGGCCGTTCACAGGAAAACTATAGAAATCAGGAGAATGGTCGCAGTAGAGATTCAAACCATCGCAGCAGTGATTCTGATGGTCGTTACTATGAGTCAAACAATCATAGAAACTATGAAAGTAGTAGCCGTAATCAAGAATCAAATAATCGTAGCCATGACTCTAACACTCGTAGCCAAGACTCTAATACTCGCAATCCTGAGAATAGTAGCCGTTTTGATAATCGCAGTGATAAGAGGAATCAATCTAAACAAAACTCAAAGGTGAAGGGTAAAGATTCTGATGCTCGCACATTTTACAATAGTTCAATCAATAAAGATAGCCAAGATGTGAGAAATGGGAGAAGTGAAGGTGGCGGCCGCAACAGAAACTGGGCGGGAAGCCAAAGGCTTAAAGCCACTGAACGTAATAGTGTAGAAGACGAAGAGTATGCTAATACATATATGCAACGCAAAGATGAAAAAATTGAGAGAGTatcaaaagttaaaaatgtcgTATCCAGTCCATCTAGATTTAAAAGTAAAGCATCATCAGAACAAGCCATCACAGAAATGACACAACGTGAACGATTGACTGAGCAGTTAGACAAAGGCACACTGGAATGCCTTGTGTGCTGTGAGCGTGTAAAACAAACTGACCCTGTGTGGTCCTGCAGCAACTGTTATCATGTGTTGCACCTCAGATGTATCAGGAAATGGGCAATAAGCAGTATGGTTGAGGGTAAATGGCGGTGTCCAGCGTGTCAGAACACGAGCTCGGACATACCGACGGAGTACCGGTGCATGTGCGGCGCGGTGCGGTCGCCGGAGTACCTCCGCGGGTCGGGCGGCGCGCACACGTGCGGCAAGTCGTGTCGCCGCGCGCGCTGTTGTCCGCATCCCTGCACGCTGCTGTGCCACCCGGGGCCCTGTCCGCCCTGTCAAGCTACCGTTCACAAACAATGCGGTTGCGGCGCTGAGACTCGCTCGGTGTTGTGCAGTAGTAAGTTACCGCAGTTGTGCGGGCGAGTGTGCCAGCGCACGCTCGAGTGTGGCGTCCACACGTGCGCCAAGGAGTGCCACGAAGGACCATGCGATGCTTGTGTTGAGATTATCGAACAAGTGTGCTACTGCCCGGTTGGCAAGTCCCGGTCGGTGGGGTGTACGCGGCCGTCCAGTGTGGATGGCGAAGTGGGGGTAGGGGTTGGTGAGGGTCGCGCGCGCTGGTCGTGCGGCGCGCAGTGCGCTCGCGTGCTGGCGTGTGGCGCGCACGTGTGCCGCGATGTGTGCCACCCCCCACCCTGCGCGACGTGCCCTCTGCTGCCAGAAACCGTGCTAACCTGCCCCTGTGGAAATACTAgGTTAGACAAGAATCAACGCAAATCATGTACAGACCCTATACCCCTGTGTGGTAACATCTGTGCTAAGCCGCTGCAGTGCGGCCCCGTCGGAGACAAACACTTCTGCAAGCTGGACTGTCACGAAGGAGCGTGTCCCGTTTGTCCTGATAAGACCGTCCTGCAATGCCGCTGCGGTCATTCGAGCCGCGAAGTGCCGTGCGCTGACTTACCGGAAATGTACAACAACGTGCTGTGTCAAAAAAAGTGTAATAAGAAGTTGTCGTGTGGCCGCCATCACTGCCGCATGGTGTGCTGCGATTCTCGCTCGCACCGCTGCCTCGTGTCGTGCGCGCGCTCGCTGCCGTGCCAGCTGCATCGCTGCGAGGAACTCTGCCACACCGGCCGCTGCGCACCCTGCCCACGACTCAGTTTCGAGGAACTAACGTGCGAGTGTGGAGCCGAGGTGGTCCTGCCTCCCATCCGCTGCGGAACCAAGCCCCCAGCTTGCACCGCGCCCTGCCGCCGGGAGAGACCGTGCGGACACCTGCCGCACCACTCGTGCCACTCCGGGGACTGTCCGCCCTGCGTCGTGCTCACCGCTAAACACTGCCATGGACGACACGAGGAACGCAAAACGATACTGTGCTCGCAAGAGGATTTCTCGTGTGGTCGGCCGTGCGGCAAGCCACTGCCGTGCGGCAAGCATACTTGCACCAAGACTTGCCACAAGGGACCGTGTGATGCTGGCAAATGTTCCCAACTGTGTAATGAGAAGCGAGCGAGCTGCGGCCACCCGTGCGCGGCCCCGTGCCACGTCGGGGCGGGGACCACGTGCCCCAGCAGCGCCCCGTGCCGCCGCCCCGTGCGGGCCACGTGCCCCTGCGGGAGGAGACACGCCGACCGACACTGCTGCGATAACTCGCGCGACTATGCTAAAATGATGAGTGCGCTGGCGGCTACCAAGATTCAAGAAGGAGGCTCCGTCGATTTATCGGAGGTGCAACGTCCTGGGAATATGCTCAAAACTTTGGAGTGTGACGACGAGTGCCGCGTGGAGGCTCGCACGCGTCGCCTGGCGCTGGCTCTGCAGATCCGTAACCCGGACGTGTCTGCCAAGTTGGCGCCGCGTTACAGTGAGCACGTGCGAGGGACCGCCGCCCGCGAGCCCGCCTTCGCGCTGCACGTGCACGACCGACTCACCGATCTCGTGCAACTAGCCAAgaaggtacacacacacaccacacactaA
- Protein Sequence
- MSQWNNSHAYNQYQGANSWNGDPNSQYMNQAHYANRQEPSNQYVSFNEFLTQMQGTSAMQPSTTNYNQAQFENYPTNQYEYQNMPSSSQNDSYNYTSNTPNVSNGSNNYQAQQQYNTLPDQNSYPNEIILKSNLTPTAMEFVPKSAAVQPSSTQNIPERAQTTQSSNIIGNEIRSHQSNSSETNWRERPTSSQNGEGSHKYDSNGRSQENYRNQENGRSRDSNHRSSDSDGRYYESNNHRNYESSSRNQESNNRSHDSNTRSQDSNTRNPENSSRFDNRSDKRNQSKQNSKVKGKDSDARTFYNSSINKDSQDVRNGRSEGGGRNRNWAGSQRLKATERNSVEDEEYANTYMQRKDEKIERVSKVKNVVSSPSRFKSKASSEQAITEMTQRERLTEQLDKGTLECLVCCERVKQTDPVWSCSNCYHVLHLRCIRKWAISSMVEGKWRCPACQNTSSDIPTEYRCMCGAVRSPEYLRGSGGAHTCGKSCRRARCCPHPCTLLCHPGPCPPCQATVHKQCGCGAETRSVLCSSKLPQLCGRVCQRTLECGVHTCAKECHEGPCDACVEIIEQVCYCPVGKSRSVGCTRPSSVDGEVGVGVGEGRARWSCGAQCARVLACGAHVCRDVCHPPPCATCPLLPETVLTCPCGNTRLDKNQRKSCTDPIPLCGNICAKPLQCGPVGDKHFCKLDCHEGACPVCPDKTVLQCRCGHSSREVPCADLPEMYNNVLCQKKCNKKLSCGRHHCRMVCCDSRSHRCLVSCARSLPCQLHRCEELCHTGRCAPCPRLSFEELTCECGAEVVLPPIRCGTKPPACTAPCRRERPCGHLPHHSCHSGDCPPCVVLTAKHCHGRHEERKTILCSQEDFSCGRPCGKPLPCGKHTCTKTCHKGPCDAGKCSQLCNEKRASCGHPCAAPCHVGAGTTCPSSAPCRRPVRATCPCGRRHADRHCCDNSRDYAKMMSALAATKIQEGGSVDLSEVQRPGNMLKTLECDDECRVEARTRRLALALQIRNPDVSAKLAPRYSEHVRGTAAREPAFALHVHDRLTDLVQLAKKVHTHTTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00007681; iTF_01416456; iTF_01252424; iTF_01417396;
- 90% Identity
- -
- 80% Identity
- -