Basic Information

Insect: Polyploca ridens
Gene Symbol: -
Assembly: GCA_951394255.1
Location: OX596246.1:5633084-5639283[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.29 22 6.6 0.3 6 23 2 19 1 19 0.95

2 17 2.3 1.8e+02 3.7 1.4 1 23 25 47 25 48 0.94

3 17 0.23 18 6.9 3.4 2 22 288 308 287 308 0.95

4 17 3.8 2.9e+02 3.0 1.0 1 23 407 429 407 429 0.82

5 17 0.24 19 6.8 0.6 2 23 564 585 563 585 0.96

6 17 0.064 5 8.6 1.2 2 23 664 685 663 685 0.96

7 17 0.019 1.4 10.3 1.6 1 23 693 715 693 715 0.98

8 17 0.1 8 8.0 3.6 1 23 749 771 749 771 0.95

9 17 2.8e-05 0.0022 19.2 2.0 1 23 779 801 779 801 0.99

10 17 0.12 9 7.8 1.9 1 23 885 907 885 907 0.99

11 17 2.3 1.8e+02 3.7 2.2 1 19 963 981 963 985 0.93

12 17 0.011 0.85 11.0 0.7 1 23 1081 1103 1081 1103 0.94

13 17 0.016 1.2 10.5 1.1 1 23 1109 1131 1109 1131 0.96

14 17 0.0074 0.58 11.6 2.6 1 23 1220 1242 1220 1242 0.97

15 17 0.00019 0.014 16.6 1.4 1 23 1248 1270 1248 1270 0.99

16 17 2.1 1.7e+02 3.8 1.8 3 23 1364 1384 1362 1384 0.93

17 17 0.046 3.6 9.1 3.9 1 23 1395 1417 1395 1417 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.29	22	6.6	0.3	6	23	2	19	1	19	0.95
2	17	2.3	1.8e+02	3.7	1.4	1	23	25	47	25	48	0.94
3	17	0.23	18	6.9	3.4	2	22	288	308	287	308	0.95
4	17	3.8	2.9e+02	3.0	1.0	1	23	407	429	407	429	0.82
5	17	0.24	19	6.8	0.6	2	23	564	585	563	585	0.96
6	17	0.064	5	8.6	1.2	2	23	664	685	663	685	0.96
7	17	0.019	1.4	10.3	1.6	1	23	693	715	693	715	0.98
8	17	0.1	8	8.0	3.6	1	23	749	771	749	771	0.95
9	17	2.8e-05	0.0022	19.2	2.0	1	23	779	801	779	801	0.99
10	17	0.12	9	7.8	1.9	1	23	885	907	885	907	0.99
11	17	2.3	1.8e+02	3.7	2.2	1	19	963	981	963	985	0.93
12	17	0.011	0.85	11.0	0.7	1	23	1081	1103	1081	1103	0.94
13	17	0.016	1.2	10.5	1.1	1	23	1109	1131	1109	1131	0.96
14	17	0.0074	0.58	11.6	2.6	1	23	1220	1242	1220	1242	0.97
15	17	0.00019	0.014	16.6	1.4	1	23	1248	1270	1248	1270	0.99
16	17	2.1	1.7e+02	3.8	1.8	3	23	1364	1384	1362	1384	0.93
17	17	0.046	3.6	9.1	3.9	1	23	1395	1417	1395	1417	0.98

Sequence Information

Coding Sequence: ATGTGCGATTTTCGCACTCCTTACAAATGGAATTTGGATCGTCACATGAAGAACCACGGTGGTACCGGGAGTTTCAACTGCTCCATGTGCAACTTTACCGCGGACATCAAGCAAAGTTTGACAGTGCACGAAATGAATCATCATACGCCGCCTGTGGGCCAATCGCTGGCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGATACGGTGCTCGTCGACGCCGCCGCGAGCCCGCTGCTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGCTCCTCACATGCCTCGgAAATGGGTTTACAATACGCGGAAAGAGATATAGTCAGCTGCAATAGCGACTCAAATGAAGCCACCGGTTCTGAAAATAGTGCCAACAGGGGCGACTCACAGTTGGCACACGATATGCATGGTCAGCGATCCCCTAATACCGCTACAGATGACGCGagatatcaaaaacataacaaGAGACCTGCCAGACCGATACCTCAGTTGATTCCATTAAATACATCGACGCCAACCCAAAGTAAAACACCCACTGGGGAACCACCAGCGAAACGATTTAAAGAGTCACCTGAATATAATGGAAACAGATATGATAATGTGCTAGATGATATCACCTTAATACCTGTCAGTACGTCGATAAATCCAAAAGAGACTGTGGTCCGAAAGAAAAATGAATCATTTTtcgataaattaaaagaaagacTGTTAACAGAGACTGGCGAAGAGGGTTCCCTCAAATGTAAAAATTGTGGTTTCGAAAGTAAATGCCTATCAGAACATTCAGTGCATGAAAAAACTTGCACCTCCCAGTCCAATCGACCTATGACAAACACATCGATCCCAAGTTTAGGTTCCACACGATGCCAAAATTGTAGACATAGGTGTAAATCCAGTGCTGATTTATATATCCATATGCAGACATGTCGAAggaatgaaaaaatatatgatgaaaAGTGCACAGAAATAAAAAGACACGATAGCAACGAAACTACCACACTAAATCAAGAAAAAGAGGCAGAACCGCATCCAATGGAAAATGTAGTTTTTGTATGGAACAACATCAACCAAGATTCGAATAAATTTGAAACGCCTTTAGACATCAACATCAATGACGATTCTACACAGCCAGAAATAACGAGAAGCTATGAACCCGAAACTGTAGACGAAAATGAGAGCATGAATTTGTCCCCGAGCCAAGCAGTCGGTAAGAAAGTTTTTAAATGCCCACATTGTCCGTTTTGGGCTTCAACCGCATCTAGATTCCATGTTCATATTGTGGGCCACTTGAACAAAAAACCATTCGAATGTTCACTATGCAGATATAAATCTAACTGGCGCTGGGATATAACTAAACACATCAAGTTGAAATCCGCTCGTGACCCAGAACATAACGACGCAAAAGTTCTTATGACTGACGAAACTGGTAGAAGGAACTATAGCAAGTATAATAAATTTTTGGCTATGCCAATACTCAACGAAAATGGAGAGAATGAATTTCATTACATTGATCCAAACACGGCAATTGATTCTACGATGGAAGTGGATGAAACATACAATGATTTAAATGATGTTAACGTATCATACGACATGCAACCTCTCAACCTGCAGACTCAACATCATGACTTCAAGTTCGATTCATATGAGAACAGAATCATGGAtccaaagaaaattaaaaagacTCTGTGGAAATGTAAAAAATGTAACTATAAAGACTCATCAAAAGAAGCACTGTTGGACCACGTTCGTGAACACTCGAGACAAGACTGTAGTTCTGAGGACGCAAAAAATGATGCTGCGAAGAAACCTGAAAATCTTCCTGATCCAGCTGATTTGGCCTATCGCTGCGGACACTGCAACCAGTTGTCCAATTGGAAACATGTCATACAGCGCCACTGCCGTTTGAAGCACGACGGAATTATAAAAGTAATAACGACCGTCAAGCCCAAATCCGATGGACCACTTTCTTTAAACGACATTTGCGCCGACACCTGTACAAAATGTCCCTTCAAAACAAATGATAAAAAACTACTCCTGTTGCATCTACAACAACACCAACCATCGCCTCTGTCTATATTTAAATGCTATTTCTGTCCATACTTCGTAAAAGATGAACACGAACTTATGCAACATCTCCTCGTCCACGGTATAACCGAACCAGAAGATTATATTTCAAAAGCCATGGATGAAAAAACACCATTATTAGAACAACATGGTTTAACACCAAACACTTCGGCTAAGCGTCATAAGTGCACAGAATGCCCGTATGAAACAAACAGTAAATCTCAGTTTATGTATCACGAGCAGTTTCACCGGCTACCTGCAGACACCCCATACAAATGTCCAGAATGTAATTATAGCGTATCTAAGAGGCATTTGCTGAATCAACACTTGAGAGTCCACGGAATCGTTACTAAAAAGACAGAAACGGAAGCAGAATTAGAAGCGTGTCCATCTAACGTCAAGGCAGAAATCAAAACAGAAGTATCGGCATATCTAGAAGAAACACCGTTTGTGTGGGTATCTGCAAAGAACGAATTTCATAAAATGTATAAGTGCCGTTATTGTTCCTATGTCAATTCTCAAAAATGTAAATTACCTAACCACGAAAAAATACACTGTATTGTATTTGAAAATAGTGACATAACTGTTTATAAATGTTTAGAATGCAAATTCACCTGTGATAATGCTGGAAGATTGGCAGAACATTCTAAAACACACGGTGAAATTTATGGCCGTATTTATTGCCCCGTCGAAGATGATGTTCCAGACGAAGAACAGATAGCAAAATTGAGAAAAGTTATTGAGACTGAAAAAGCCAATTCGACTGATGATTATTTTAGAGATGATGGAACACAAAACGATTGTAAAGAAATTAAAATACTGTACTTCTGCCAGAAGTGTCCATCTAGATTTTATAATGACACTGAATTAAAGATTCATGACAAATTCCACGACTTAACTTTCCCAAATAAGTGTAAAAGCTGTGAATTCTCAGTTCTCGATGAGAGCGAGTTGGCCGCCCATGCTACTGTCCACTCGGACGAATATCATACGAAAACAAAAATGCTCAAATTCATTCACAATATCCAATCAGCTCATAAAGAACCCAAATTAGAACTTATCCATTGTCCAAATACGTCAGAAATAACTTGGGTAGTTGCAAATCCATGTAAAAATTATGATAATGTAGAACCTATACATAAAAAATCGAGTGATACAAAACATGTACCAAAGCAATATTACTGCAAAGAATGTCCTGCTAAATTCTTCAAAAGTTCTGCTCTTAGCTATCACTTGGGCTTACATGGAGGAGAAGGCGACCAtaaatgtaagaaatgtagttaCGCCGTTAAAAATATTGGTAATTTGGCCAAACATGAATTGTTACATGAAAATGAGAGCAAACCCAATTGCGATTACGAATCCGGAGACGatatggattataaaaatattccacTATCGGGTACGGATCTCTTTCAAAGAAAGACTGAAGCCCAGAAGAGAGTTCTAACTGATAAAGATAAGTTAGTTAAACCAAACGACCATTTTCCACCTGTTCTTCAGGCTGACCCACAGTTCGGGTATTTGATGCACGGCAATCCCGAATTCATCTATCCCACATATTTGAAGAACGGGCGACAGAAAGAAAAGCGATACAAGTGCCACAAGTGTCCATCAGCATTCGAAAAAAGAGAGCAATATAAAATTCATCTGTCACTACATGGCTCTAAGCAGAGATACAAATGTGAGCTCTGTGATTACTCCGTTAAATATTATGCTAACTATGTCCAACATATGAGGAAACACCAAATGAACGACGAAGCTCAGGCTGAGAGGAAAAAAGACAGTAATGGATTTACTGAAATCGAAAATCAAGATGATACAAGGCTGGAAGATAGTGTGGATAATATCAAACTGGCAATCAAAACTATGCCAAAAGGAGTACCCAAGAGTGACTTTCAACAATTTTCGATAAGCGACCAACAAACACTCCGCTTATTACAACGTAGGCGTTCCATGAATAACTCCGGCAAGGATACGAACCCATCTGAATCATCTCCAACAAAGGAGCGCAAATtacatttgtgtttattgtgccCTTACACAAATCAACGCCAAGATGCTTTGAGTAATCATTATAGAAGACATGATGATACAGATATTCTTACCACAGGAAACCATAAATGCTCTTTTTGTGACTTAATTGTCGTTCAGTCCCATTTTCTTAGGGAACATTTGAAGACTCATTTTAATTACCAGAAAACCCTTACCCCGGAATGTTTTGTAGCTAATGATGATGTTAGTTTTACAATTACAAAAGTTGATGAAGAAAATCAAACTACTGATCTCAAATTAGATATGCAAAACGAGAGATATTCGTGTAATGACgaaaaaatatttgtgaaaATTAAGACGGGAGAACTATTGGTAGAATAA
Protein Sequence: MCDFRTPYKWNLDRHMKNHGGTGSFNCSMCNFTADIKQSLTVHEMNHHTPPVGQSLASRRRNRVGASDTVLVDAAASPLLPKEEEGSGDSRSSHASEMGLQYAERDIVSCNSDSNEATGSENSANRGDSQLAHDMHGQRSPNTATDDARYQKHNKRPARPIPQLIPLNTSTPTQSKTPTGEPPAKRFKESPEYNGNRYDNVLDDITLIPVSTSINPKETVVRKKNESFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKTCTSQSNRPMTNTSIPSLGSTRCQNCRHRCKSSADLYIHMQTCRRNEKIYDEKCTEIKRHDSNETTTLNQEKEAEPHPMENVVFVWNNINQDSNKFETPLDININDDSTQPEITRSYEPETVDENESMNLSPSQAVGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCRYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYIDPNTAIDSTMEVDETYNDLNDVNVSYDMQPLNLQTQHHDFKFDSYENRIMDPKKIKKTLWKCKKCNYKDSSKEALLDHVREHSRQDCSSEDAKNDAAKKPENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKSDGPLSLNDICADTCTKCPFKTNDKKLLLLHLQQHQPSPLSIFKCYFCPYFVKDEHELMQHLLVHGITEPEDYISKAMDEKTPLLEQHGLTPNTSAKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLNQHLRVHGIVTKKTETEAELEACPSNVKAEIKTEVSAYLEETPFVWVSAKNEFHKMYKCRYCSYVNSQKCKLPNHEKIHCIVFENSDITVYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEDDVPDEEQIAKLRKVIETEKANSTDDYFRDDGTQNDCKEIKILYFCQKCPSRFYNDTELKIHDKFHDLTFPNKCKSCEFSVLDESELAAHATVHSDEYHTKTKMLKFIHNIQSAHKEPKLELIHCPNTSEITWVVANPCKNYDNVEPIHKKSSDTKHVPKQYYCKECPAKFFKSSALSYHLGLHGGEGDHKCKKCSYAVKNIGNLAKHELLHENESKPNCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDSNGFTEIENQDDTRLEDSVDNIKLAIKTMPKGVPKSDFQQFSISDQQTLRLLQRRRSMNNSGKDTNPSESSPTKERKLHLCLLCPYTNQRQDALSNHYRRHDDTDILTTGNHKCSFCDLIVVQSHFLREHLKTHFNYQKTLTPECFVANDDVSFTITKVDEENQTTDLKLDMQNERYSCNDEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00762188;
90% Identity: iTF_00007639; iTF_01083840; iTF_01437601; iTF_00762188;
80% Identity: -