Odup002158.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ochropacha duplaris
Gene Symbol
-
Assembly
GCA_951361185.1
Location
OX592691.1:11281526-11286298[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.19 14 7.0 3.4 2 22 191 211 190 211 0.95
2 15 3.1 2.3e+02 3.1 1.0 1 23 310 332 310 332 0.82
3 15 0.54 39 5.5 0.3 2 23 467 488 466 488 0.96
4 15 0.052 3.8 8.7 1.2 2 23 567 588 566 588 0.96
5 15 0.015 1.1 10.4 1.6 1 23 596 618 596 618 0.98
6 15 0.11 7.8 7.8 3.4 1 23 652 674 652 674 0.95
7 15 2.3e-05 0.0017 19.3 2.0 1 23 682 704 682 704 0.99
8 15 0.095 6.9 7.9 1.9 1 23 788 810 788 810 0.99
9 15 0.49 36 5.7 1.6 1 19 866 884 866 888 0.93
10 15 0.009 0.66 11.1 0.7 1 23 984 1006 984 1006 0.94
11 15 0.047 3.4 8.9 1.0 1 23 1012 1034 1012 1034 0.96
12 15 0.0061 0.45 11.7 2.6 1 23 1123 1145 1123 1145 0.97
13 15 0.00015 0.011 16.7 1.4 1 23 1151 1173 1151 1173 0.99
14 15 1.8 1.3e+02 3.9 1.8 3 23 1267 1287 1265 1287 0.93
15 15 0.0078 0.57 11.3 3.7 1 23 1298 1320 1298 1320 0.98

Sequence Information

Coding Sequence
ATGGGTATTCAATACGCAGAAAGAGATATAGTCAGCTGCAATAGCGACTCAAACGATGCCGCCAGTTCTGAAAATAGTGCAAACAGGGGCGACTCCCAGTTGGCACACGATATGCATGGTCAGCGATCACCGAATGCGGCTACCGATGACGCGAAATATCAAAAACATAATAAGAGACCTGCCAGACCGATACCACAACTGATCCCATTAAATACATCGACACCAACTCAAAATAAAACACCCACTGGAGAACCACCGACGAAAAGATTTAAAGAGTCACCTGAATTTAATGGAAATAACTTTGATAATATACTAGATGATATCACCTTAATACCTGTCAGTACGCCGGCAAACCCAAAAGAGACTGTAGTCCGAAAGAAAAATGAATCATTTTTcgataaattaaaagaaagacTGTTAACAGAAACGGGAGAAGAAGGTTCGCTTAAATGCAAAAATTGCGGTTTTGAAAGTAAATGCCTATCAGAACATTCAGTGCATGAAAAAACTTGCAGTTCCCAGTCAAATCGACCCATAACAAACACTTCGGTCCCAAGTTTAGGTTCCACACGATGCCAAAATTGTAGACATAGGTGTAAATCTAGCGCTGATCTGTACATTCATATGCAGACGTGTAGTAGGAacgaaaaaatatatgatggaAAATGCTCAGAAATTAAAAGTCACGATAGCAACGAAGCTTCAACATTGAGTCAAGAAAAAGAGACAGAGCCCCATCCGATGGAAAATGTAGTTTTTGTATGGAATAACATCAACCAAGACTCGAACAAATTTGAAACGCCTTTAGACATTAACATCAATGACGATTCTACACTTCCAGAGATAACGAGAAGTTATGAACCCGAAACTGTTGACGAAAATGAGAGCATGAATTTGTCCCCGAGCCAAGCGGTCGGTAAGAGAGTTTTTAAATGCCCACATTGTCCATTTTGGGCTTCGACCGCATCTAGATTTCATGTCCATATTGTGGGACACTTGAACAAAAAACCATTCGAATGTTCCTTATGCAAGTACAAATCGAACTGGCGCTGGGATATTACTAAGCACATCAAATTGAAATCCGCTCGTGACCCAGAACATAACGACGCAAAAGTTCTCATGACTGATGAAACCGGTAGAAGAAACTATACCAAGTATAGTAAATTTTTGGCTATGCCAATTCTCAACGAAAATGGAGAGAATGAATTTCATTATATCGACCCAAATACGGCGATCGATTCAACGATGGAAGTAGACGAAACATACACTGATTTAAATGATGGTAACGCATCATACGACATGCAACCTCTCAACTTGCAGACTCAACATCATGATTTCAAGTTCGATTCCTATGAGAATAGAATTATGGAcccaaagaaaattaaaaagaccCTGTGGAAATGTAAAAAATGCAATTATAAAGACCCATCAAAAGAAGCACTGTTGGAGCACGTTCGAGAACACTCCAGACAGGACGGTAGTTCTGAGGACGCAAAAACTGATGCTGCCAAGAAAGCTGAAAATCTTCCCGATCCAGCTGATTTGGCCTATCGTTGCGGACACTGCAACCAGTTGTCCAATTGGAAACATGTCATACAGCGCCACTGCCGTTTGAAGCACGATGGAATTATAAAAGTTATCACGACGGTCAAGCCTAAATCCGATGGACCACTATCATTAAACGACATTTGCGCTGACACATGTACTAAATGCCCCTTCAAAACAAATGATAAAAAGCTACTCCTGTTGCATCTACAACAACATCAACCGTCGCCTCAGTCAATATTTAAATGCTATTTCTGTCCATACTTTGTGAAGGATGAACACGAACTTATGCAACATCTCCTCGTCCACGGTATAACCGAACCAGAAGACTATGTTTCAAAATCCATCGACGAAAAGTCACCATCATTGGAACAACATGGTTTGACACCAAACACATCGGCTAAGCGTCATAGATGCACAGAATGCCCATACGAAACTAACAGTAAATCTCAGTTTATGTATCACGAACAATTTCATCGGCTTCCTGCGGACACTCCATACAAATGTCCAGAGTGTAATTATAGCGTATCTAAGAGACATTTGCTGAATCAACACTTGAGAGTCCACGGCATCGTTACTAAAAAGACTGAAACTGAAGCAGAATTAGAAGCATCGTCGTCAAACGTCAAAGTCGAAATCAAAACAGAAGTATCAGCATATCTAGAAGAAACACCTTTTGTGTGGGTTTCTGCAAAGAAtgaatttcataaaatgtacAAGTGCCGTTACTGTTCTTACGTCAATTCTCAAAAATGTAAATTACCTAACCACGAAAAAATACACTGTATTGTATTCGACAATAGTGACttaactgtttataaatgttTAGAGTGTAAATTCACCTGTGATAATGCTGGAAGATTGGCGGAACATTCTAAAACACACGGTGAGATATACGGCCGTATTTATTGCCCCGTCGAAGATGATGTCCCAGACGAAGAACAAATAGCTAAATTAAGAAAAGTTATTGAGTCTGAAAAGGCTAATTCGCCTGATGATTGTTTCAGAGATGACGGAATACAAAACGACTGTAAAGAAATCAAAATACTGTACTTCTGCCAGAAATGTCCTGCTAGATTTTATAATGACACTGAATTAAAGATTCATGACAAATTCCACGACTTAACATTCCCAAATAAGTGTAAAAGTTGCGAGTTCTCAGTACTCGATGAGAACGAGATGGCCGCACATGCTACCGTCCATTCTGACGAATATCATACGAAAACAAAAATGCTCAAATTCATTCACAATATCCAATCAGCCCATAAAGAACCCAAATTGGAACTTATCCATTGTCCCACTACGTCAGAAATAACTTGGGTAGTTGCAATTCCGTgtaaaaattatgattatataGAACCTACACATAAAAAGTCGAGTGATACTAAACATGTACCAAAGCAATATTACTGCAAAGAATGTCCTGCTAAATTCTTCAAAAGTTCTGCTCTTAGCTATCACTTGGGATTACATGGAGGTGAAGGCGAACATAAGTGTAGGAAATGTAGTTATGCTGTCAAAAATATTGGAAATTTAGCCAAACATGAATTATTACACGATTGTGAGATCAAACCCAATTGCGATTACGAATCCGGTGACGATAtggattataaaaatattccacTATCGGGTACAGATCTCTTTCAAAGAAAGACTGAAGCCCAGAAGAGGGTTCTAAATGATAAGGATAAGTTAGTCAAGCCAAACGATCATTTTCCACCCGTTCTTCAGGCCGACCCACAGTTCGGCTATTTGATGCACGGCAATCCCGAATTTATATATCCAACATATTTGAAGAATGGGCGACAGAAAGAAAAGCGTTACAAATGCCACAAGTGTCCATCAGCTTTCGAAAAAAGAGAgcaatataaaattcatctatCACTACATGGCTCCAAGCAGAGATACAAATGTGAGCTCTGTGATTACTCAgttaaatattatgcaaattatGTCCAACATATGAGGAAACACCAAATGAACGACGAAGCTCAGGCTGAGAGGAAAAAGGACAGCAATGGATTTACTGAAATCGAAAATCAAGAAGTTACGAGGCTGGAAGATAGTGTGGATAATATCAAATTGGCAATCAAGACTATGCCAAAAGGAGTACCCAAGAGCGATTTTCAACAATTTTCGATAAGCGACCAACAAACACTCCGCTTATTACAACGTAGGCGTTCGATGAATAATTCCGGTAACGACGCGAATCAATCCGAATCGTCTCCAACAAAGGAGCGCAAATTACATTTGTGCTTATTGTGCCCTTACACTAACCAACGCCAAGATGCTTTGAGTAATCATTATAGGAGACATGATGATTCAGATATTCTCACCACAGGAAACCATAAATGCTCTTATTGTGACTTAATAGTTGTTCAGTCTCATTTTCTTAGGGACCATTTGAAGACACATTTTAATTACCAGAAAACACTCACCCCAGAATGTTTTGTAGCTAACGATGATGTTAGTTTTACTATTACAAAAGTCGATGAAGAAAATCACTCTACTGATCTCAAATTAGATATGCAAAAAGCGAGATATTCGTGTAATGatgaaaaattatttgtaaaaattAAGACGGGAGAGCTGTTGGTAGAATAA
Protein Sequence
MGIQYAERDIVSCNSDSNDAASSENSANRGDSQLAHDMHGQRSPNAATDDAKYQKHNKRPARPIPQLIPLNTSTPTQNKTPTGEPPTKRFKESPEFNGNNFDNILDDITLIPVSTPANPKETVVRKKNESFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKTCSSQSNRPITNTSVPSLGSTRCQNCRHRCKSSADLYIHMQTCSRNEKIYDGKCSEIKSHDSNEASTLSQEKETEPHPMENVVFVWNNINQDSNKFETPLDININDDSTLPEITRSYEPETVDENESMNLSPSQAVGKRVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYTKYSKFLAMPILNENGENEFHYIDPNTAIDSTMEVDETYTDLNDGNASYDMQPLNLQTQHHDFKFDSYENRIMDPKKIKKTLWKCKKCNYKDPSKEALLEHVREHSRQDGSSEDAKTDAAKKAENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKSDGPLSLNDICADTCTKCPFKTNDKKLLLLHLQQHQPSPQSIFKCYFCPYFVKDEHELMQHLLVHGITEPEDYVSKSIDEKSPSLEQHGLTPNTSAKRHRCTECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLNQHLRVHGIVTKKTETEAELEASSSNVKVEIKTEVSAYLEETPFVWVSAKNEFHKMYKCRYCSYVNSQKCKLPNHEKIHCIVFDNSDLTVYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEDDVPDEEQIAKLRKVIESEKANSPDDCFRDDGIQNDCKEIKILYFCQKCPARFYNDTELKIHDKFHDLTFPNKCKSCEFSVLDENEMAAHATVHSDEYHTKTKMLKFIHNIQSAHKEPKLELIHCPTTSEITWVVAIPCKNYDYIEPTHKKSSDTKHVPKQYYCKECPAKFFKSSALSYHLGLHGGEGEHKCRKCSYAVKNIGNLAKHELLHDCEIKPNCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDSNGFTEIENQEVTRLEDSVDNIKLAIKTMPKGVPKSDFQQFSISDQQTLRLLQRRRSMNNSGNDANQSESSPTKERKLHLCLLCPYTNQRQDALSNHYRRHDDSDILTTGNHKCSYCDLIVVQSHFLRDHLKTHFNYQKTLTPECFVANDDVSFTITKVDEENHSTDLKLDMQKARYSCNDEKLFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00762188;
90% Identity
iTF_01252365;
80% Identity
-