Basic Information

Insect: Polyploca ridens
Gene Symbol: zfh1
Assembly: GCA_951394255.1
Location: OX596254.1:2988717-2999763[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0054 0.42 12.0 0.5 1 23 282 304 282 304 0.99

2 11 0.3 23 6.5 7.6 1 23 311 334 311 334 0.93

3 11 0.00036 0.028 15.7 0.2 1 23 365 388 365 388 0.97

4 11 3.1 2.4e+02 3.3 1.2 2 17 393 408 392 415 0.78

5 11 0.044 3.4 9.2 0.1 3 19 427 443 426 445 0.95

6 11 4.9e-05 0.0038 18.4 0.5 3 23 456 477 456 477 0.97

7 11 5.2e-05 0.004 18.4 0.5 3 23 492 513 490 513 0.95

8 11 6.2e-05 0.0048 18.1 4.3 1 23 532 554 532 554 0.98

9 11 0.00077 0.06 14.7 0.0 1 23 560 582 560 582 0.96

10 11 0.00014 0.011 17.0 5.8 1 23 592 614 592 614 0.98

11 11 0.00028 0.022 16.1 3.3 1 23 620 643 620 643 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0054	0.42	12.0	0.5	1	23	282	304	282	304	0.99
2	11	0.3	23	6.5	7.6	1	23	311	334	311	334	0.93
3	11	0.00036	0.028	15.7	0.2	1	23	365	388	365	388	0.97
4	11	3.1	2.4e+02	3.3	1.2	2	17	393	408	392	415	0.78
5	11	0.044	3.4	9.2	0.1	3	19	427	443	426	445	0.95
6	11	4.9e-05	0.0038	18.4	0.5	3	23	456	477	456	477	0.97
7	11	5.2e-05	0.004	18.4	0.5	3	23	492	513	490	513	0.95
8	11	6.2e-05	0.0048	18.1	4.3	1	23	532	554	532	554	0.98
9	11	0.00077	0.06	14.7	0.0	1	23	560	582	560	582	0.96
10	11	0.00014	0.011	17.0	5.8	1	23	592	614	592	614	0.98
11	11	0.00028	0.022	16.1	3.3	1	23	620	643	620	643	0.96

Sequence Information

Coding Sequence: ATGAAGCTTCAGTTTTGCAAAGCGTGTTTAGTTAGCGACGTTAAGATGTATGgtctaaattcaaattcaacacAGATCCCGAATGAAGAAGTCTACTTCCAATTATTGCAAATACCTAATTTGACTGATAAAGAATACATTTGCTACTTATGTGCAAGACTGCTGCAAAAGTTTCAAGAGTTCAAATCAAAATGCCAGAGGGCTCATGATATTTTGTCAAGCTTAAAGATAGATAATGTTGAGttaacaaaccaaataataaaaaaaatagaccgTAAATATAACAAACTTACATACAATTTCACTTTCACTTCACTGGCAGATAGTTATGATAATGAAAGTCCAAAAACTTCAAATAATGAAGACAATATTGATATAACTTATGTTAAAACAGAAGAAGAATACAATTACAATGCAGAATATATTAAAGATGAAAAACAGATAATAAATGGTAGTGATATTAATCTACTTAATGATGAATCAAATGAATTAGATGATTGTTTTTCCTCAGAGGAGAATATTTTAGATGATATTGGCATTCCAagtaagaaaagaaaaaaatcacCTAAAGAACCTAAGACTAAAAGGCGAAAAACGAAAAGTGATACAAAAACTGTAAAGAAAAAAGATGATGAAGACAAATCTTTAAGTGATGATGAACCCTTGTCCAATAAAGTTACTAAGAAAGCAGAGAAAGCAAATAAAACAAGTAAAAGGAATTACAATAAGAATTTCAATGCAAGTTTCTTTGAAGATTATGCTACAGTTGTGTTCCTGACGCCAGAAGAGGCAAAAAATGAAGTCCTATTGAGAAAAGAAACAAGCAATTATAAGAATTCTGAATTTAAGTGTGAGCTGTGCTTTAGAGGGTATGAAGCTAAGGCAGCTTTTGCTAATCATATGAAGAAACACAGTGTGGAATATGGTGAGCATGAGTGTGATCTATGTCATTTACGGTTTCCGCAACAAGTATTTCTTTGTAAACACCGTCTCGCTTGCCACAAGAGGAAATTTTACTGCAAAATATGTCCATATGTTTGCTTTTGCACACACCAAGCAAAGACCCATGTTAGTCTACATAAAGGAAAGAAATATCCTTGCAAGGATTGTAGTGAAATTTTTAGTATGCCAAACAGCCTCGCAATGCACAGAAGATTGAAGCACATGACAGAGTGTGTTTGCGAATTGTGCGGCAGCACGTTTGCCACCACACGTGGACTTTATTTCCATAATATGAAGGTTCATAGACAAGACACAAATGATAAACAAGGTCCAATGTGTGATGAGTGTGGGATCCACTTTGCAACAGAAGTAGCTTGGAAACGACACTTCGTTTTATCTTCCAAACACATAGTGAGCAACGGTTGCAAATACTGTGGAGATACATTCACGAGCCCGACCGAATTGAAAATTCACATGAGAGGCTTCCACGCTCGGAAGCATTTCAACAGGAAAGTCAAATTGCCCATAGCATGTTCTATTTGTAATAAATCACTAACAACAAGCAGTGAATACAAGTCGCACATGACGTCAGAGCACCCTTCGTCAGAGATGGCGATGAAGATAGACGCAGAAGATCAGAAAGTACAGAAGTTTGTGTGTGAAGTGTGCGGACAAATGTTTAAGCAACAATGTTTCCTGCGTTACCACCAACGCAAGCACACCGGCGAGCGTCCTTTCTCATGCTCGGAGTGCGGCAAGCGCTTCCAGCTGAGCGGCGCACTCGCCTCGCACGCGGCAGTACACGCGCGACCCAACGCCGCTCGACGCacgcacaagtgcaccttgtgCGCCAGACACTTTACATTCAAGAGTGCACTCAATAAACACATGAAGGTCCATCTCGGCATAAGACCCCACAAATGTGCAATTTGCGACAAATCTTTTATAAACAAGTGCGATGTCAAGCTGCATATAAAATACGTTCACAACAAAGTGCCGTGGCCTAAACGAGATAGGAGTAAACGAAATACTACAGAGGAGACTGCACCTTTTGTACAATATAATTAA
Protein Sequence: MKLQFCKACLVSDVKMYGLNSNSTQIPNEEVYFQLLQIPNLTDKEYICYLCARLLQKFQEFKSKCQRAHDILSSLKIDNVELTNQIIKKIDRKYNKLTYNFTFTSLADSYDNESPKTSNNEDNIDITYVKTEEEYNYNAEYIKDEKQIINGSDINLLNDESNELDDCFSSEENILDDIGIPSKKRKKSPKEPKTKRRKTKSDTKTVKKKDDEDKSLSDDEPLSNKVTKKAEKANKTSKRNYNKNFNASFFEDYATVVFLTPEEAKNEVLLRKETSNYKNSEFKCELCFRGYEAKAAFANHMKKHSVEYGEHECDLCHLRFPQQVFLCKHRLACHKRKFYCKICPYVCFCTHQAKTHVSLHKGKKYPCKDCSEIFSMPNSLAMHRRLKHMTECVCELCGSTFATTRGLYFHNMKVHRQDTNDKQGPMCDECGIHFATEVAWKRHFVLSSKHIVSNGCKYCGDTFTSPTELKIHMRGFHARKHFNRKVKLPIACSICNKSLTTSSEYKSHMTSEHPSSEMAMKIDAEDQKVQKFVCEVCGQMFKQQCFLRYHQRKHTGERPFSCSECGKRFQLSGALASHAAVHARPNAARRTHKCTLCARHFTFKSALNKHMKVHLGIRPHKCAICDKSFINKCDVKLHIKYVHNKVPWPKRDRSKRNTTEETAPFVQYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01416226;
90% Identity: iTF_00007430;
80% Identity: -