Prid028413.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polyploca ridens
Gene Symbol
ZBTB47
Assembly
GCA_951394255.1
Location
OX596271.1:5922437-5927044[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.0082 0.64 11.4 0.4 1 23 5 28 5 28 0.88
2 28 2.8 2.1e+02 3.5 0.5 3 23 58 79 58 79 0.91
3 28 0.0016 0.12 13.7 2.1 1 23 101 123 101 123 0.98
4 28 0.0037 0.29 12.5 0.2 1 23 127 149 127 149 0.94
5 28 0.0035 0.27 12.6 0.3 1 23 154 177 154 177 0.96
6 28 0.0021 0.16 13.3 2.7 1 23 183 206 183 206 0.97
7 28 0.00015 0.012 16.9 0.2 1 23 213 236 213 236 0.98
8 28 2.2e-05 0.0017 19.5 0.3 1 23 242 264 242 264 0.98
9 28 1.1e-06 8.4e-05 23.6 0.8 1 23 270 292 270 292 0.99
10 28 0.0005 0.038 15.3 7.5 1 23 298 320 298 321 0.95
11 28 1.4 1.1e+02 4.4 1.3 1 23 459 482 459 482 0.92
12 28 4.6 3.6e+02 2.8 0.2 2 23 507 529 506 529 0.93
13 28 0.013 0.98 10.8 0.3 1 23 553 575 553 575 0.97
14 28 0.0024 0.19 13.1 0.4 1 23 579 601 579 601 0.98
15 28 0.0014 0.11 13.8 0.5 1 23 606 629 606 629 0.95
16 28 0.0062 0.48 11.8 0.3 2 23 636 658 636 658 0.93
17 28 0.05 3.8 9.0 6.3 1 23 665 688 665 688 0.96
18 28 0.00011 0.0083 17.4 4.7 2 23 695 716 694 716 0.96
19 28 0.011 0.83 11.1 0.4 1 23 860 883 860 883 0.96
20 28 0.34 26 6.3 0.1 2 23 909 930 908 930 0.96
21 28 0.028 2.1 9.8 0.2 1 23 952 974 952 974 0.98
22 28 3.9e-05 0.003 18.8 0.3 1 23 978 1000 978 1000 0.99
23 28 9e-05 0.007 17.6 0.3 1 23 1005 1028 1005 1028 0.96
24 28 9.4e-05 0.0073 17.5 0.5 2 23 1035 1057 1035 1057 0.97
25 28 0.00014 0.011 17.0 1.1 1 23 1064 1087 1064 1087 0.98
26 28 0.0064 0.49 11.8 3.9 2 23 1094 1115 1093 1115 0.96
27 28 1.3e-06 0.0001 23.4 0.9 1 23 1121 1143 1121 1143 0.98
28 28 0.2 16 7.1 0.2 2 23 1149 1171 1148 1171 0.91

Sequence Information

Coding Sequence
ATGAAGAACTTATACTTGTGTTTTTATTGTGAACAAAGATTCAGCGATCCTGAAAAACTTCGGCTTCATAATGACGTTGAACATCTTTCATTGACAAcatatgaaattaaatacgcCTTGTTGAAAGTAAAGAAATACGAGCTTATCAAAGTAGACATCACAAAAACAGGCTGTAAGATTTGCAATGAAGACCTACATGATTTGAATATGTTAAAAATACATATCGTTGAGAAACACAAGAAAAATGTAGATCTAATGTCGAGCGACGGTATATTACCCTTTAGAGTAACGCAATTCGACTTTAAATGCGCGTCATGTGATGAGAAATACGAAgatttcaagtctttgaatcaCCACATGAACGTTCACTTCCAGAATTTTATTTGCGAGCAATGTGGTACAGGTTTTATAACGCCTGAACGTTTGAGGACACATGGTTTCTCTCATGAAACTGGATCGTTTTCTTGCGAAGCTTGCGATAAGGTATTCCGATCATCAAACGCACAGAAGGAACACTACGCTACAGTCCATATGATGGTTAAACGTCATCGTTGTCCTCAATGTCCAGAAACTTTCAGGAATTACTTCCAGAGAAACAAGCATGTATCTACAGTTCACGGCATAAAATTAAAGGAGTACAAATGCACAATGTGTCCTAAAGTGTTCACTTTGAGCGGCAAATTAGGAGTGCATGTTAACACTGTGCATTTGAAAATGAAACGATATTCTTGTGACGTGTGCGAGTGGAAGTTTTACTCAAAAGCTGAGTTAAAGGATCATATGATCAGGCATGGTGGCGAAAGAAAGTATCAGTGTGGTGTCTGTAAGAAAGCGTACGCTAGGAAATATACTTTGAAGGAGCATATGAGAATACATGAAAACGATAGAAGATTCATTTGTACCACTTGTGGGAGGTCATTTGTTCAAAATTGTAGTTTGAAACATCATACGAAAGTTCATCATCCAACGAATGTCGTTTCAGGAACGAAGGCCAATAGAACCGACTCGACATTAAATGTGGACACAGAGAAGCAGCCAAAAAGAATAGTGCCGCTATTCCAAGTTGCCTACGATCGGAGCGTATGTAAGCCTTTGGGAACCGTACTGGACTTCAGTAAATTAAAAGCACTGAAATCTAACGTGCTAAATAGTACCTTATTACCTACAACATCTAGAGACTTTACTCCCTCTCGCAGCCCATCGCCATTGTCACATGGAGACGCTCCAATACTATACATACAAGACGACACGAACCTGCCCGTAGAATTCGTTCTTAAACCAAAGACACATCAGAAAACCCCAGACGTGAGGCAAAACGTTTTGACAATATTTGAGTTCTCAACTATCTACCCGTTCGTCTATAGTAACAATAAGTTTAAATGCTTCGTCTGCTGCCAACCATTCTTTGATACGACTCTGCTCAGAGAGCACATGGTGGCGGCACACACATTCACAGCTGTTAAAAGACTGGTCAATAATAAAAGGGAAAATGTCTTAAAAGTAGACGTAAGTGATATAATGTGCAAGATCTGCTCATTAAGGCCAAAAGATCTGGTAGAAATGAAACAGCATCTTCAAAAAATCCACGACAAGCCAATTGATCCGGAATTACATGATAATATGATCCCGTTTAATTTACAAGCCGTCGATGGTTCACACAAATGCGTTATTTGCAATGAAACCTTCATCAAAGTGAGGGTATTGGTCATACACATGAGCGTACACTTCAACAATTATAGTTGCGAATTTTGTGGGTCAGGATTCATGACATTACGTCTCCTGAAGAAACATTTGGAAGTCCACGAGAACGGCAACTTTCCCTGCGACAGATGTAACAAAGTCTTCAATACACCTTACAAGAGAACCCTGCATGTTAGAGGAGTACACTTGAAACAGTATCCCCGTAGATGTCCGATATGTCCCGAGAGATTTAACTCGAATTATAAAAGGACAATTCACCTGCAAGATGTACATAATCAATCGACTAGGGTGCATAAATGTGAGACATGTGGACGTGCTTTCAATCTCAAATATCATCTGATTTGTCACACACGTTCAGTACATTTACAAGAAAGGAATCAGCAATGCGATGTTTGCCATCAAAGATTCTGCAATAAGGAGTCATTAAAGCGCCACATGGTTATACATACTGGAATCATCGAAGAAACAAATTCATCCATAATACTGAAAGATGAAGATGGATCGGATATAAAATTAACAGTTCTCAAGACTCCAATATGCCTCGATAACCTTGAATACGAACATGAAGTAGTTAGAAAGAGAAAAAAGACATATAAAGCAACAAAGAGAAGAATAAAAAAGGTTGCAAAGGAATTAAGAAATGTCGACGATGCTACACTATCCAATATTGCCGTTCTAAAAGCACCTATATCCCTGGATGCAATAAAATGTGAAGATGAACTTAAATCGTCGATAACTTTTAACGTACAGACTGTACAAGGAACACTTCTATGTGGACAGTCTCGAAGGACTAAAGAAGATGAAATCTGGAAGCAAAATGCTTTGACCATCTTTGAACACTCATACGTTTACCCTTTTATTCACGCTAGCAATAAGTACAAATGCTTCATATGCGCAGAAGCATTTTTCAGCGCAAATCTATTAAAAGACCATACAAATAATGATCATACGACTaaagaaatgaaaaaagaattAAACAACAGAGTTAGAGATAAGAATTTAAAAGTTGATGTCACACAATTGCAGTGTAAACTGTGTTTGGAAATATTAGTGAACTTGCAATCTCTAAAAGAACATTTGAAAGGACACGGAAAGCTTATTGACCCTGAACATCAAGATAACCTCGTgccttttaaattaaatggcaCAAGTTTTGAATGTCAAATCTGTGGCGAAAATTATCTGAAATTGAGACTTCTAATCATTCACATGagcaaacattttaataattacaGTTGTGAAATATGTGGATCCGTTTTTATTTCCATGAATTTATTAAAGCGCCATCTTCAAACGCACGAAACTGGCAGTTTTCCTTGCGATAAATGTGACAAAGTTTTTAGTAATTCAGCGAAAAAGACCTTGCATATCCGAGGGGTCCATTTGAAACAGTTTCCAAGAAGATGTCCCATCTGCCCTGAGagatttaattcaaattatcaAAGAACGAAACATTTGAGGATTGTTCATAATCAAACCACCGGACTATTTAGATGTGAAACTTGCGGTCGAGAGTATGACTTGAAATATCATCTCCTCGTGCATATTAGATCCGTACATTTGCAGGAGAGGAACCAAGAGTGTCCTATCTGCCATTCGAGATTCTTCTCGAAATACTGTTTGTCCAGACACATGGTTATCCATACGGGGGAGAAGAATTTCAAATGTGAGATTTGCGGGAAGGCCTATGCTAGAAGGAAGAATTTGAGGGAGCATTCTCGATCTCATGAGGTTGGCCAAACTGTATGTTCTGTGTGTGGACAGAATTGCGTGGACCATGTGGGTCTTGTTGCGCATGTGAGCGCTATGCATGGCGCtttgaattaa
Protein Sequence
MKNLYLCFYCEQRFSDPEKLRLHNDVEHLSLTTYEIKYALLKVKKYELIKVDITKTGCKICNEDLHDLNMLKIHIVEKHKKNVDLMSSDGILPFRVTQFDFKCASCDEKYEDFKSLNHHMNVHFQNFICEQCGTGFITPERLRTHGFSHETGSFSCEACDKVFRSSNAQKEHYATVHMMVKRHRCPQCPETFRNYFQRNKHVSTVHGIKLKEYKCTMCPKVFTLSGKLGVHVNTVHLKMKRYSCDVCEWKFYSKAELKDHMIRHGGERKYQCGVCKKAYARKYTLKEHMRIHENDRRFICTTCGRSFVQNCSLKHHTKVHHPTNVVSGTKANRTDSTLNVDTEKQPKRIVPLFQVAYDRSVCKPLGTVLDFSKLKALKSNVLNSTLLPTTSRDFTPSRSPSPLSHGDAPILYIQDDTNLPVEFVLKPKTHQKTPDVRQNVLTIFEFSTIYPFVYSNNKFKCFVCCQPFFDTTLLREHMVAAHTFTAVKRLVNNKRENVLKVDVSDIMCKICSLRPKDLVEMKQHLQKIHDKPIDPELHDNMIPFNLQAVDGSHKCVICNETFIKVRVLVIHMSVHFNNYSCEFCGSGFMTLRLLKKHLEVHENGNFPCDRCNKVFNTPYKRTLHVRGVHLKQYPRRCPICPERFNSNYKRTIHLQDVHNQSTRVHKCETCGRAFNLKYHLICHTRSVHLQERNQQCDVCHQRFCNKESLKRHMVIHTGIIEETNSSIILKDEDGSDIKLTVLKTPICLDNLEYEHEVVRKRKKTYKATKRRIKKVAKELRNVDDATLSNIAVLKAPISLDAIKCEDELKSSITFNVQTVQGTLLCGQSRRTKEDEIWKQNALTIFEHSYVYPFIHASNKYKCFICAEAFFSANLLKDHTNNDHTTKEMKKELNNRVRDKNLKVDVTQLQCKLCLEILVNLQSLKEHLKGHGKLIDPEHQDNLVPFKLNGTSFECQICGENYLKLRLLIIHMSKHFNNYSCEICGSVFISMNLLKRHLQTHETGSFPCDKCDKVFSNSAKKTLHIRGVHLKQFPRRCPICPERFNSNYQRTKHLRIVHNQTTGLFRCETCGREYDLKYHLLVHIRSVHLQERNQECPICHSRFFSKYCLSRHMVIHTGEKNFKCEICGKAYARRKNLREHSRSHEVGQTVCSVCGQNCVDHVGLVAHVSAMHGALN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01437281;
90% Identity
-
80% Identity
-