Prid013872.2
Basic Information
- Insect
- Polyploca ridens
- Gene Symbol
- Rel
- Assembly
- GCA_951394255.1
- Location
- OX596253.1:11512503-11534284[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-35 9e-32 111.2 0.1 1 168 63 231 63 232 0.86 2 2 2.1 1.1e+04 -3.0 0.1 5 54 347 392 344 399 0.56
Sequence Information
- Coding Sequence
- ATGTCTACTACAAGTGACCATGATATGAGTGAGTCGTCATACTTGGGGTCTCCGCAGTCGTACGTTACGGAGTCTCCGTACAGTTCACCTTCACAACAAGTGCCCCAGTTGGCGACAATCTTAACGGAACTGTCGTGCGCTGAAAACAAACAGCATCGGTTCAGCAATAATGGTAATGCCCCAACACTGCGTATTGTCGAGCAACCGCAGAATCACTTCAGGTTCCGATATGTCAGCGAGATGGTTGGCACACATGGATGCCTGCTTGGCAAGTCTTATGCTACAAATAAGACCAAGACACATCCCACTGTTGAGcTAGCAAATTATGCTGGGCAGGCGCTCATCAGGTGTCGTTTGGCGCAGCACAACAATCCTGAAGAACATCCCCATAAACTCCTCGAGGATGAACAGGATCGGGATGTCAGCTACATGGTACCGGAACATGGAAGCTACAAAGTCGGGTTTGCTGGCATGGGCATCATTCACACGGCCAAGAAAGATGTTCCTGGGTTGCTGTTCAAGAAAATGGCGGAGAAGTTTAAAAATTCCTTAAACATGAAAGAGCTCAAAACGCAGTGTGATAATATTGCGAAGAATATAAATCTCAACATAGTTCGGTTGAGATTCAGTGCCCATGATCTCGATACCGGCAAAGAGATTTGTGATCCGGTATTTTCTGAACCTATTCATAACATGAAAAGTGCAGCTACGAATGATTTGAAGATTTGTCGTATTAGCAGATGTAGCGGCCGACCCAGAGGGGGCGACGATGTATTCGTATTGGTAGAAAAAGTGAACAAAAaGAATATAATGATTAAATTCTATGAGTTGTCACCAAACGGTGATGTGACTTGGTCCGCTACAGGAAACTTCCTTCACAGCCATGTACATCATCAGTACGCCATTGTATTCAGAACACCACCATACAAAGACCTACAAATCGGCAGCGACGTCAAAGTGTATATTGAACTGGTTCGACCATCAGACGGTCGCACGAGCGAGCCTAAAGAGTTTACCTACAAAGCAGAGCAAGTGTACAAACAGATCAAGAAACGTAAAATGACGTCATCCTACTCCTCGTTGGAAAGTTCTTCAGGTGGATCAATTAAGAGTATGAGTGAAATTCCTACTATGGTGGCATTTATGAACCAACAACAAGAGGAAAAGGTGGAAGTGCCCGTATTCACTATTCAACAGTTACCAGTAGTTCCACAAGGAGCCTCATCGCCTGCTCAATGTGATTTGGCCAATGCTCTCGGAATGCAGCCAACTGAGCAACCCCCCTTAGCAACCCCCATGTGGGGTCAACCCAGCGTGGTTCCGGTCGCAGTGTCGTCACAGTTCCCTAACCTGAAACTGAACTCATCCGAGTTTGAGAAAGTATTGAAACTAGATGCTGATATGCCACCAGAAGACAGGAGGATGCTCTCCGAAGCCGATTGGTTATTAGAATATCTAAGGTCGTACGGCGACAGTCTTCCAGATGAGACGAACAGCATGGACTTCATTCGATCTACATTAGTTCCCGATTCTGGTCGCCCAAGGGGTCTCACATTGAAGGCTGATTCCGCGTCTACTTCTCGACCCGTCGTTTCAACACGTGAAAATGTTGAAGTAAAAAAGGAGAATATAGAATATCCCGCTGTTTATAATTCCGAAGACGGTCTTGAAGTAAAGAAGTTGGTCAAAGAGCTATGTGAAATCATGAAAAACAAGAAAGCATACAAGAAGCATGAAGTGCGAAGCAGATTGGAAAGATTATTCGACATTAGACTTTGCAATGGAGACAGATTCCTCCACATGACGCTCTGCAGTAAACAGCCCAGTTTCGAGTACATCGTCAAAATGATACACAACTTCAAAATGACGCACCTTCTCGACTTGACTAATTACAAACAACAAACCATTCTACACCTCGCTGTTATGAATGATCTCCCCAATATGGTTAATCTACTTGTATCTAAAgGTTGCAATCCGATGGTGAAAGACCACAACGACAACAACGCGATACACTACGCGGTGAGGTACCAGTCGTGTCTGGAGACTCTTCTGAACGCCATCAAGAAGTACGGCGTCGTTTGCGATCTCGACGCGTGCAATAATGAGAAGCAGTCCCCGCTGCACGTGTCGGCGGTGCACGACTGCGGCGCGAGCGCGCGCGCGCTGCTGGCGAGCGGCGCCAGCTACAGCGTGCGCGCGCTCGCAACGGTAAACGTAATGTTGTTGTACAGAGAAGCAGTCCCCGCTGCACGTGTCGGCGGTGCACGACTGCGGCGCGAGCGCGCGCGCGCTGCTGGCGAGCGGCGCCAGCTACAGCGTGCGCGCGCTCGCAACGAGAAGCAGTCCCCGCTGCACGTGTCGGCGGTGCACGACTGCGGCGCGAGCGCGCGCGCGCTGCTGGCGAGCGGCGCCAGCTACAGCGTGCGGGACGCGCACGCGCGCACGCCGCTGCATCTCGCAGCGTACGACGACAAACTGAACGCAGCGAGGGCGCTGCTCGAGTACATCAAACCAGAGGACATTGACGCAGTGGATGATGGTGGCAACACGGCCCTTCAGATAGTATGCGGTGGAGCCATGCGGAATAACACGCGGGAGATCGTTAAGTTGCTGCTGGGCAAAAagGCTGATCCGTCGCTGCATAAAAACAACGAGTCTGCGTGGAAGCTAGCGCGCGACAAAGCTGAGATACGTGAAATAATGTTTGAGTATATTGATTCGGAGACAATGTATGAGGATGACGTGAAATCTGAGCCCGATGATGAATTCGAGTCGGCTGATGAAGGTGTAAGTACTAGCTTCATTTAA
- Protein Sequence
- MSTTSDHDMSESSYLGSPQSYVTESPYSSPSQQVPQLATILTELSCAENKQHRFSNNGNAPTLRIVEQPQNHFRFRYVSEMVGTHGCLLGKSYATNKTKTHPTVELANYAGQALIRCRLAQHNNPEEHPHKLLEDEQDRDVSYMVPEHGSYKVGFAGMGIIHTAKKDVPGLLFKKMAEKFKNSLNMKELKTQCDNIAKNINLNIVRLRFSAHDLDTGKEICDPVFSEPIHNMKSAATNDLKICRISRCSGRPRGGDDVFVLVEKVNKKNIMIKFYELSPNGDVTWSATGNFLHSHVHHQYAIVFRTPPYKDLQIGSDVKVYIELVRPSDGRTSEPKEFTYKAEQVYKQIKKRKMTSSYSSLESSSGGSIKSMSEIPTMVAFMNQQQEEKVEVPVFTIQQLPVVPQGASSPAQCDLANALGMQPTEQPPLATPMWGQPSVVPVAVSSQFPNLKLNSSEFEKVLKLDADMPPEDRRMLSEADWLLEYLRSYGDSLPDETNSMDFIRSTLVPDSGRPRGLTLKADSASTSRPVVSTRENVEVKKENIEYPAVYNSEDGLEVKKLVKELCEIMKNKKAYKKHEVRSRLERLFDIRLCNGDRFLHMTLCSKQPSFEYIVKMIHNFKMTHLLDLTNYKQQTILHLAVMNDLPNMVNLLVSKGCNPMVKDHNDNNAIHYAVRYQSCLETLLNAIKKYGVVCDLDACNNEKQSPLHVSAVHDCGASARALLASGASYSVRALATVNVMLLYREAVPAARVGGARLRRERARAAGERRQLQRARARNEKQSPLHVSAVHDCGASARALLASGASYSVRDAHARTPLHLAAYDDKLNAARALLEYIKPEDIDAVDDGGNTALQIVCGGAMRNNTREIVKLLLGKKADPSLHKNNESAWKLARDKAEIREIMFEYIDSETMYEDDVKSEPDDEFESADEGVSTSFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01416542; iTF_01415592; iTF_01436786;
- 90% Identity
- -
- 80% Identity
- -