Basic Information

Insect: Polyplax serrata
Gene Symbol: -
Assembly: GCA_037055365.1
Location: JAWJWE010000044.1:511635-520229[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.54 31 4.7 0.8 3 23 117 138 115 138 0.91

2 29 0.068 4 7.6 1.2 2 23 145 167 144 167 0.88

3 29 0.0044 0.26 11.3 2.0 3 23 351 372 349 372 0.95

4 29 0.13 7.3 6.7 0.4 2 20 379 397 378 399 0.91

5 29 0.0055 0.32 11.0 2.0 1 23 555 578 555 578 0.92

6 29 2.4e-05 0.0014 18.4 0.8 1 23 596 619 596 619 0.94

7 29 0.00012 0.0069 16.2 1.6 1 23 636 659 636 659 0.93

8 29 1.3 76 3.5 2.8 1 19 689 707 689 712 0.90

9 29 4.2 2.4e+02 1.9 0.6 3 23 752 773 750 773 0.89

10 29 0.16 9.6 6.4 0.1 2 23 780 801 779 801 0.96

11 29 0.00016 0.0095 15.8 0.5 1 23 809 831 809 831 0.97

12 29 0.13 7.4 6.7 0.1 3 23 903 925 903 925 0.93

13 29 0.0027 0.16 12.0 0.7 1 23 928 951 928 951 0.97

14 29 0.0014 0.083 12.8 0.4 2 23 958 980 957 980 0.96

15 29 0.063 3.7 7.7 0.5 2 22 1008 1028 1007 1028 0.92

16 29 0.16 9.3 6.4 0.1 2 20 1043 1061 1042 1063 0.91

17 29 0.018 1 9.4 2.2 2 22 1078 1098 1077 1098 0.93

18 29 0.0089 0.52 10.3 0.2 2 23 1116 1138 1115 1138 0.91

19 29 4.5 2.6e+02 1.8 1.2 2 19 1142 1163 1141 1168 0.87

20 29 0.036 2.1 8.4 1.2 3 23 1176 1198 1175 1198 0.92

21 29 0.63 37 4.5 1.6 2 23 1206 1228 1206 1228 0.94

22 29 0.0017 0.1 12.6 0.3 2 23 1296 1317 1295 1317 0.96

23 29 1.1 62 3.8 1.1 1 23 1332 1355 1332 1355 0.95

24 29 7.4 4.3e+02 1.2 1.9 3 23 1363 1384 1362 1384 0.80

25 29 0.038 2.2 8.4 0.5 2 23 1390 1411 1389 1411 0.97

26 29 1.3 73 3.6 1.3 1 23 1481 1504 1481 1504 0.95

27 29 3.7 2.2e+02 2.1 0.1 3 23 1534 1555 1533 1555 0.94

28 29 0.17 9.7 6.3 1.3 2 23 1564 1586 1563 1586 0.95

29 29 0.2 12 6.1 0.7 3 23 1593 1613 1590 1613 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.54	31	4.7	0.8	3	23	117	138	115	138	0.91
2	29	0.068	4	7.6	1.2	2	23	145	167	144	167	0.88
3	29	0.0044	0.26	11.3	2.0	3	23	351	372	349	372	0.95
4	29	0.13	7.3	6.7	0.4	2	20	379	397	378	399	0.91
5	29	0.0055	0.32	11.0	2.0	1	23	555	578	555	578	0.92
6	29	2.4e-05	0.0014	18.4	0.8	1	23	596	619	596	619	0.94
7	29	0.00012	0.0069	16.2	1.6	1	23	636	659	636	659	0.93
8	29	1.3	76	3.5	2.8	1	19	689	707	689	712	0.90
9	29	4.2	2.4e+02	1.9	0.6	3	23	752	773	750	773	0.89
10	29	0.16	9.6	6.4	0.1	2	23	780	801	779	801	0.96
11	29	0.00016	0.0095	15.8	0.5	1	23	809	831	809	831	0.97
12	29	0.13	7.4	6.7	0.1	3	23	903	925	903	925	0.93
13	29	0.0027	0.16	12.0	0.7	1	23	928	951	928	951	0.97
14	29	0.0014	0.083	12.8	0.4	2	23	958	980	957	980	0.96
15	29	0.063	3.7	7.7	0.5	2	22	1008	1028	1007	1028	0.92
16	29	0.16	9.3	6.4	0.1	2	20	1043	1061	1042	1063	0.91
17	29	0.018	1	9.4	2.2	2	22	1078	1098	1077	1098	0.93
18	29	0.0089	0.52	10.3	0.2	2	23	1116	1138	1115	1138	0.91
19	29	4.5	2.6e+02	1.8	1.2	2	19	1142	1163	1141	1168	0.87
20	29	0.036	2.1	8.4	1.2	3	23	1176	1198	1175	1198	0.92
21	29	0.63	37	4.5	1.6	2	23	1206	1228	1206	1228	0.94
22	29	0.0017	0.1	12.6	0.3	2	23	1296	1317	1295	1317	0.96
23	29	1.1	62	3.8	1.1	1	23	1332	1355	1332	1355	0.95
24	29	7.4	4.3e+02	1.2	1.9	3	23	1363	1384	1362	1384	0.80
25	29	0.038	2.2	8.4	0.5	2	23	1390	1411	1389	1411	0.97
26	29	1.3	73	3.6	1.3	1	23	1481	1504	1481	1504	0.95
27	29	3.7	2.2e+02	2.1	0.1	3	23	1534	1555	1533	1555	0.94
28	29	0.17	9.7	6.3	1.3	2	23	1564	1586	1563	1586	0.95
29	29	0.2	12	6.1	0.7	3	23	1593	1613	1590	1613	0.84

Sequence Information

Coding Sequence: atgggagAAAGCCTGGAAGAGCTTTGTCGTCTGTGTGCGGCTTTTGACCCGGTAAAAATGCCGATATTCAGTTCCGAAGGAAAACAGAGGAATTTGATCGTCAAAATACAAACTTGCCTGCGATTCAAGGTTGCTGAAACGGATGGATTTCCCAGCAGTGTCTGCTATCGATGCATgttcaatttggaaaattactATGACTTTTATGAGACTTGCATTAAAGCACAAACACTACTACAGAGTAAACTCGGCGACGGAGGAGATGCCGCAGTGATTTGCACTCCAATCATCAAGGAAGAAGGTGGCGGAGATGGTGGAGGAATACCAAACTTAGAAAGACTGGTTCATTGTGATCTGTGTACCGCTTCGTTCAATACTGCAAAGGACAGATGGACTCACGTGTTGCAGACTCACAAAGGCGATCCTAGGATTACTTGTACTATCTGTCGAAAGGGTTTCAGTACAGTTTCGACCCTGGCCTTTCACAAGAAGAACAAACACCCGGAGGAAGGTGACGAAACGGAAAGGAAACTCAAACCATTGCCTAAGCTACAGAAAATCAACGAAAtcccaaaaattcaaaacaaaacctaCGAAACGGTTCGAAACTTTCTGAACAACAAGactgaaaacattttacagGATGCTAGGCATTCGGATTTAGCCAATTTCAACGTTAAAATTGGTAATACGGATATTAAGTTCGGCAACACGAGCATCACAGTGGGTAATACGAACATTCGGGTCGGTGGTTCAGCAGGCCACAATGACAGCAGGGCAAGCGAGAACCAATCAATGATAGATCGTTTGAAGAACTTGGGAGTCGACGTGTTCACTGGGAATTCAAAGAACAATTCAGAGACTGCACCTGCACACGACGACCTGGAAAAGCACAGGCGCAATACAAACAAGAACCAGAAAATGTACCATTCGAGCGATGAGCATAACCAGGCAGAATTTCAAAATCCGGAAGACCTGCTGGAACTAGACATGGATTTAGATGGTGGTGATAACGTTGAGAACTTAATGGAATCGGAAAGTATTTTTGGTTGCGAATTATGTTTTCGTGATTTCAAAGATAGATCATCGTTGTGGTTGCACATGCTTTACTGTCACCGAGGGGAAGCCGGTTGCACGTGCGGGATTTGCTTAAAATTGTTCACGAATTATCAAGAATTAACGGAGCATGCAATGCTATGTAAGGATCATATGGAGAGCGAAAAACGTAGGTACTTCTGTAGGATCTGCTACAGGCAACACGATTCCAAGAAGAAGCTGGAGTCACATACCTCGATCCACAACTTAAACGATGAGTACATAAAAGAGAATTTCGATCCCAATAATTTAGTATCATCAAATCCTACCATgacggaaaaattaaaatacgaGGACTTCATTGAAGCGGACGTTAGCGAATATTCGGATACATACTCTCAGGAATTAGACATAACCAACGACTCAACACAGCACAGTATGACAGGCAATGGTTTCTCTAATTCAGGGCAACAATATTACGACGAAGTACAAAATTACCGAGATCAGTTAGCTTATCAGAACTTCTTAGAAGGTTCCGGACATTTTCTGGAATCATCCTCGTTTTTCGACAATGTGAAAACCGAGGATAGCAAGGGAGAGATGAATCAATCGGaagacacaaataaatttcgatgTGATGAATGTTACAGGACCTATGAAACGTCTCTCCAATTGACCAAACATAAGTACAACGTACATAAAAACCCGAATAGACTGCAATATCGTAATGATTCTTTCGGTAACCCCGTGTACGAGTGTGAATATTGCGGGCAGACATACGATTCGCCTAAACAGTTAACGAAGCACCGATACAATGTGCACAAGTTCCCGACGAACGCCGTAATGCTAGACGATGCAGGGAAGCAAATGTTTCATTGCTCGGAGTGTCCCAGAGCTTTTGAAACTCCTAGGCAGTTACAAAAGCACAGGTACAATGTACACAAGTCAATGAGGAAACCAATGGGACAACCGGGCTGTGATAGTCCGAGTAGTGTAGAATCTCTCAAACCCGGATTTCATTACTCTTCATTCGACTGCGAAATCTGTGGTGAGAAGTCAACAAGCAAAACGGAACGTTGGAAACATTGCTACAAACAGCAtcgaaacgaagaaaaattagtATGTTCCAACGAagactgcaaaaaaataatgccgactgaaaattttcaaaaggaacACATGAATTTCCATGCGATGCAAGGGAAGTACCCGATTTGCTGTGAAATTTGTTCCAAGTTGTGGACGACAAAAATGGAGTTCTGGAAACACGTATCAGGAGTACATTATTCCTTAATAGGGTTAACGTGTGGCGTTTGCATGAGAATGTTTTTGACGTTGGATGAATTGAAGGAACACATAAAAATCCACGAGCCGTTATCAGAAGCCGAATTTAATTGTGATATTTGCGGCCGTGGCTACTCATCAAAGCCAAAAATGACACGGCACAGACTGATTCACGAGAACGATCCCGAAAGTGACGAATACAATATACTGAAGCACACATTGCTCAAAGGTAACAAGCCTCCGGTTgcagagaaaggaaaatatgaaattttgaatatcCCAAAAATCAATCGTAACTACGAAAACGATTTAGAAATTATTGAAGTCAATCCCGATGATAACGGGCTGATAGACCTAGAACAGGAAGAAAATACAGACACACTTTGGTGTGACGTCTGTCCGGATCTGACGTTTGCTGACCTCGATGAACTGCGATCCCACAGGCGTAACATTCATGCCTTATACCCTTGTGACTTATGCCCGAAGTTCTATGGAGGAGTCAGTCATCTGTGGAAACATACAAATCGTAGTCACAAAAATCATCCTGACATAACATGCGAATTCTGTGGGAAAACTAGTGCGAGTCGCATACAGTTGAAAggtcacataaataaaaatcacaaggAGATCTTGTTGGGTCATGTCGTATCGGATGGTGGAAATCCCCTGCACGTACTACCAGATCCAGATCCcaccaatttaaattgtaggAGATGTGGCCGAGAGTTTAGAATTCGGTCTTTAGTACGTCGACACGAGAAAACATGTCTGACAAAAACCAATTTCGATCCGGACCCgaccaatttaaattgtcagaAATGTGGAAAATATTATCCCATCCGTTCTTTAGTCAGACGACACGAAAAAGCCTGCCTAAATAGAATACTGAAGGACGTCGATCCTgccaatttaaattgcaagGTGTGCGGTAAAGAATTCCCGAAGAGATCGTACTGTCGCCGCCACGAAAGAACTTGCGGAACCAAAAGAGAACGAGCGCCCAAAGATGATGGTCCCATTGAAATTCAATGCGAGTGGTGCCCGAAACAGTTCAATAATCGACGGGCATATGCCAGCCATGTGGACTACATGCACAGTTTGGTTACTTGTGAAATTTgcgatgaagaagaaaaggcatCTTTCCGGTCGAAAACGGAATTGTACAATCACTGCAAGGATAAGCATTCGGATCACCCGGACCTGTTGTGTACATTTGAAAAGTGCAGAAGGCTACTAAGAACCAAGGGAGATTTAGAAAAACATATGAGAGACCACAAGAACAGAGACAATCCTCCTACTTGTGAATACTGTGCCGATATATTCAAGGGCCGTAAGAAGTTACGAATTCACATGTTGCATCAGCACAGATCCGAACAGTCCCGTAAATATATTTGTGGAGTTTGCGTGAAAGTTCACGACGATACAGAGAAACTAATAGCTCACGCCTACGAAGCACACGGTAAGATAATGGAGAGAGATTTTGTGTGCAAGATCTGCGCCAAACAATACAACTGCAATGCGAAAGTGCTCGACCACCACAAGAACACACATGACAGTCGGTACAAGCCTTGTAAAGTTTGCCTGAGAATTTTTACGGATCAAACTCTGCTGGAGGAACACTTGCAGCAGCATGCTGTTGGAGACCGCAGTATAAATTCGGATCTGATGACTGATCACCAGTGCATGATCTGCATGGAATCGTTTGACACTGTCGTACTTCTACACGAGCACGTGAAAGAGAATCATCCGAATCTTAGGGAGAACTCTTGTCTGATTTGTGGGAAGAAATACCAGAGTATCTACACATGCTACGACCACATGGAAAATAAACATGGTGGAACATATTTAACTTGTCGGAAGTGTTTAATGTTGTTCACCGACAAAGACGAAAAGGCTGCTCATATGATGACCCACGGCATTCAGGAGGAAGTTGATTTACTGACCTGCACTCTTTGCCGGGCTCGTAACGATTCTGAGGAAGCACTGGAGATTCACATAAAAGAGGCTCATGCCGATTTGTTCGAAGAGCTTGCGGACAGAAATATGTGTTTGATATGTTCTAAAGTATTAAAGTATAAGTATAGTATTTACTGTCACGTAGAGAAGAATCATCCGACTAACTATTGTTGTAGAATTTGCCTAATGATATACAAAGAAAAGGACAAATTAGACGATCACGTGTTGAGGCTACACACTCGCGACAAGGAGGGAAATCCTCCTGTTTTCGTGCCGAAGGCCATTAACAAAAAGCCGGTGAGTAATAAGCGACCCAAAAACATGTGTGCCGTTTGCCAGAAAGTCGAGGAAAATACCGAAAGCTTGCGAATGCACGTGGAAACCGAACACAGTTCTGTACTATCGAAGGATCTAACTTGTTTCCTTTGCGGCCATACATATGCGAATCGATTCAAAGTTGTCAGCCATGTTAAGGTTTACCACGGACCGCCTTATATGTGTTGCCGGGAATGTTTGAAAATCTTCACAAGCGAAGAGGAATTCGTGGCGCACAATGCCGAGCACGAGAGCGAAGCAGCGTTAAAACCCCAAGAAGAGGAGGTTGAAAATTCTGGTGGAGTGAAACGGAAAAGGAATCGAACGTCTTTGGAAACACTGCCCAAAAGGCCTAGGAGTAGTCGTACGAAAGTTgtgaataatgtaaataaattcgaacATTCAGAAGTGGAAGCGGCCGAAgacgacgaggacgaggacgaaGTCGAtgacgacgaagaagaagaggagatGGAAGAAGACGAGAATGAGGGTTCGGGAGgcgaaatgaaagaagaaatagatgACATGGAGTCGGACATGGAGTACGAGAATGCAACAGACGACGAAGATGAATCTAAACTTAAAAACGATGAAgacgaggacgaggaggaCGACGAGGAAGACGACGAAGATGACGACGACGTCGATGAGGATGATGTGGATGACAGCATTGAGGAAGACGAGGACGAGGACAGTAAAATGGTGAGCGAGAAAGACAATGAAGACAGTTATGTTTGCGAAACCGTAAAAAACGACACTGGAGGCGAcgagtttaaaattaaaattaagcacAGTATCGGAGCCAAAGAGGATACCGAAGAGGGTAAAAGTGGGAATGTCGTGAAAGGTTTGAAAAGTAGCGAAGTCGTACGAAATGGAGAAGACAGTAAGGGGCAATCGCAGGATACCAAGAAAATGGGAAACTCAGTGGATGATAGGAAAAGTCTAGCTTCATGCATAGCCAAATGA
Protein Sequence: MGESLEELCRLCAAFDPVKMPIFSSEGKQRNLIVKIQTCLRFKVAETDGFPSSVCYRCMFNLENYYDFYETCIKAQTLLQSKLGDGGDAAVICTPIIKEEGGGDGGGIPNLERLVHCDLCTASFNTAKDRWTHVLQTHKGDPRITCTICRKGFSTVSTLAFHKKNKHPEEGDETERKLKPLPKLQKINEIPKIQNKTYETVRNFLNNKTENILQDARHSDLANFNVKIGNTDIKFGNTSITVGNTNIRVGGSAGHNDSRASENQSMIDRLKNLGVDVFTGNSKNNSETAPAHDDLEKHRRNTNKNQKMYHSSDEHNQAEFQNPEDLLELDMDLDGGDNVENLMESESIFGCELCFRDFKDRSSLWLHMLYCHRGEAGCTCGICLKLFTNYQELTEHAMLCKDHMESEKRRYFCRICYRQHDSKKKLESHTSIHNLNDEYIKENFDPNNLVSSNPTMTEKLKYEDFIEADVSEYSDTYSQELDITNDSTQHSMTGNGFSNSGQQYYDEVQNYRDQLAYQNFLEGSGHFLESSSFFDNVKTEDSKGEMNQSEDTNKFRCDECYRTYETSLQLTKHKYNVHKNPNRLQYRNDSFGNPVYECEYCGQTYDSPKQLTKHRYNVHKFPTNAVMLDDAGKQMFHCSECPRAFETPRQLQKHRYNVHKSMRKPMGQPGCDSPSSVESLKPGFHYSSFDCEICGEKSTSKTERWKHCYKQHRNEEKLVCSNEDCKKIMPTENFQKEHMNFHAMQGKYPICCEICSKLWTTKMEFWKHVSGVHYSLIGLTCGVCMRMFLTLDELKEHIKIHEPLSEAEFNCDICGRGYSSKPKMTRHRLIHENDPESDEYNILKHTLLKGNKPPVAEKGKYEILNIPKINRNYENDLEIIEVNPDDNGLIDLEQEENTDTLWCDVCPDLTFADLDELRSHRRNIHALYPCDLCPKFYGGVSHLWKHTNRSHKNHPDITCEFCGKTSASRIQLKGHINKNHKEILLGHVVSDGGNPLHVLPDPDPTNLNCRRCGREFRIRSLVRRHEKTCLTKTNFDPDPTNLNCQKCGKYYPIRSLVRRHEKACLNRILKDVDPANLNCKVCGKEFPKRSYCRRHERTCGTKRERAPKDDGPIEIQCEWCPKQFNNRRAYASHVDYMHSLVTCEICDEEEKASFRSKTELYNHCKDKHSDHPDLLCTFEKCRRLLRTKGDLEKHMRDHKNRDNPPTCEYCADIFKGRKKLRIHMLHQHRSEQSRKYICGVCVKVHDDTEKLIAHAYEAHGKIMERDFVCKICAKQYNCNAKVLDHHKNTHDSRYKPCKVCLRIFTDQTLLEEHLQQHAVGDRSINSDLMTDHQCMICMESFDTVVLLHEHVKENHPNLRENSCLICGKKYQSIYTCYDHMENKHGGTYLTCRKCLMLFTDKDEKAAHMMTHGIQEEVDLLTCTLCRARNDSEEALEIHIKEAHADLFEELADRNMCLICSKVLKYKYSIYCHVEKNHPTNYCCRICLMIYKEKDKLDDHVLRLHTRDKEGNPPVFVPKAINKKPVSNKRPKNMCAVCQKVEENTESLRMHVETEHSSVLSKDLTCFLCGHTYANRFKVVSHVKVYHGPPYMCCRECLKIFTSEEEFVAHNAEHESEAALKPQEEEVENSGGVKRKRNRTSLETLPKRPRSSRTKVVNNVNKFEHSEVEAAEDDEDEDEVDDDEEEEEMEEDENEGSGGEMKEEIDDMESDMEYENATDDEDESKLKNDEDEDEEDDEEDDEDDDDVDEDDVDDSIEEDEDEDSKMVSEKDNEDSYVCETVKNDTGGDEFKIKIKHSIGAKEDTEEGKSGNVVKGLKSSEVVRNGEDSKGQSQDTKKMGNSVDDRKSLASCIAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01165107;
90% Identity: -
80% Identity: -