Pvan011284.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polypedilum vanderplanki
Gene Symbol
-
Assembly
GCA_018290095.1
Location
CM031379.1:17382125-17390461[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.071 3.3 8.3 0.3 3 21 228 246 227 247 0.94
2 30 0.011 0.52 10.8 3.4 2 23 253 275 252 275 0.96
3 30 2.8 1.3e+02 3.3 0.1 2 20 301 319 301 320 0.93
4 30 7.2 3.3e+02 2.0 0.8 2 23 325 347 322 347 0.88
5 30 0.0032 0.15 12.6 2.5 1 23 408 431 408 431 0.91
6 30 0.016 0.75 10.4 0.2 1 23 496 519 496 519 0.93
7 30 0.0063 0.29 11.7 2.3 1 23 523 545 523 545 0.97
8 30 2.4 1.1e+02 3.5 1.9 2 23 652 674 651 674 0.95
9 30 0.014 0.65 10.6 0.5 1 20 678 697 678 699 0.98
10 30 0.018 0.82 10.2 3.7 3 23 754 775 752 775 0.92
11 30 0.0046 0.21 12.1 0.3 1 23 843 866 843 866 0.94
12 30 0.0059 0.27 11.8 1.5 1 23 870 893 870 893 0.97
13 30 0.0043 0.2 12.2 2.4 1 23 998 1021 998 1021 0.96
14 30 0.013 0.58 10.7 0.6 1 23 1025 1048 1025 1048 0.96
15 30 0.00049 0.022 15.2 0.8 1 23 1195 1218 1195 1218 0.97
16 30 0.23 10 6.8 7.1 1 23 1222 1245 1222 1245 0.94
17 30 1.1 51 4.6 1.4 1 23 1325 1347 1325 1347 0.96
18 30 2.3 1e+02 3.6 2.8 1 23 1353 1376 1353 1376 0.93
19 30 0.021 0.97 10.0 2.0 2 23 1381 1403 1380 1404 0.95
20 30 0.16 7.6 7.2 1.8 3 23 1517 1538 1515 1538 0.97
21 30 5.5 2.5e+02 2.4 0.3 1 23 1542 1565 1542 1565 0.86
22 30 0.0029 0.13 12.7 0.4 3 23 1632 1652 1630 1652 0.96
23 30 0.19 8.9 7.0 2.6 1 23 1679 1702 1679 1702 0.94
24 30 1.3 61 4.4 1.3 2 23 1723 1745 1722 1745 0.95
25 30 0.00075 0.034 14.6 3.1 1 23 1782 1805 1782 1805 0.94
26 30 0.14 6.6 7.4 0.5 1 22 1814 1835 1814 1838 0.90
27 30 1.1 49 4.6 2.7 1 23 1908 1930 1908 1930 0.94
28 30 0.0013 0.058 13.9 1.4 1 23 1936 1958 1936 1958 0.98
29 30 0.48 22 5.7 0.6 3 23 1992 2013 1990 2013 0.91
30 30 0.41 19 6.0 1.3 2 21 2038 2057 2037 2062 0.92

Sequence Information

Coding Sequence
ATGGACACGAAAGTCTCAAGTGATAGCCGAAAGGTTTGCAGAACCTGTTTAAGAAATTGTGAGTCGAAGAAAGGTCTGATTTCACTTTTTGATTATGATCAAACATGCCCGCAagacagaataaaatttagcaAGATGCTTAGTGTAATTTCCAATCAAAGGATTTCTGAAGATGATTGTTTGCCTAAAAAAGTCTGTGTAATGTGCATATCACAGATTCGTGcattttactattttaaaattcaagttgatgAATCTCTCAAAACATTGCAACTTCAACGAGCAAATAAAGAACATCAACAATATCGTATACCCACTATCAAACAAGAACCAAATACATCTATGCCATTAATTATGTCTCCAAGGACAGTAggtgaaaataatgaagaaattgaaagagaagaaaatatgCTTGAGGAAATTATTTCGCCTGTTCCTCATAATTCAAGTAATAAAAGTAACAAACTTGAAGGAGATTCTCATActgatgatgaaataattgattatGAGCCAGATATGcaaaattatgatgatgatgaggatgAACAGCAAGAAGAAGGAGAAGAGATCACTGCTGATAATTCTATGAAATCTTCTAGTCAAATTGATGCACCAAAGGGCAAAAGTCCTGATAGTGGTATAAGTTCGAGCACTCCCAATCATGCATCAAAAACTCCAATTTGTAATGTGTGTAAAAAAGAGTTTGTCAacttaaaagcattttttttgcataaaagaGGAAGCTGCTCTTCTACAAAATGTCGATATTgtgtgaagaaatttaataacttcGCACAGTTAAAATTGCATACTCGTTACAAACATcctgaaaaatataatgaactcaaattaaactttcaaaaagcGACAGTTCAGTTAGAAAGGATAACTAAATTCAACGAATGCTCTACTTGTGGTGTTAAACTTGTTAGTAAGCTTGCATTGCTTCGTCATCATGCAGATTGTGACAGTAAATGTATTGAATGTGGAATCAAGATTccgagaaaagaattttactttaaGCATTTGGAAAGTGTACATAAATTAAATGCAGATCCATCATCTTTAGAATGTCCATTTTGCATGAATATCTTTCATTCAGAAAGAATATTACAAGAGCATATTCAACGTTTACATCCAGATGAGAATCAATCAGAACATCAGTCATTTACTGATACAATGAGTGAAGCAGGAGAGAGTACTAGTAATGAACCATTCTTATATGAATGCCAAATTTGTCAGGCACGCTTCAAATCATCGAAAAGTTTAAATCAGCATAAAAGTTTCAAGCATAAAGATGGCCAAGAAAATGTGAATAGAATTTATAAGAATCACattgttcaaaaatattcaagagaTGAATTTTTCGAGAAGTTCTTGGTTAAGAAATCAGATGATTTTTATCGATGTCTACCTTgtcaaaaggaaatttttaaaagatcatTAATGATGCATGTTAAAAGTAAACATGCAGCAGTGCGCAGTTATCGATGCGAACTATGTCCAGAAGCATTTTTCAGAGCTGATTATCGTCAAAGGCATTTCGCAATAGCTCATCCATATGATTTTAAATGCCATGAATGCGATGTACAATTTGATAGAGCATATAAATATGATGTTCATATGACACAACATGGAATTAAGCAGACACATTTTAAACCAAATGAGGGATGTGACCGTTATGATCTTTCaccaaatgaaattcaatatattGAGGATTCAACAAATTACGATTATTCGAATGATGATGCGTTGATCAAGAATGATAATAATGAAGTCATAAGCGCGATTTCAAATTCAACTGAAATTCCGatgaaaaaagatgaattttgtgacaaatatttgatttcaGTGAGTGAGATCATGGTAAATTGTTTAATATGTCAACAGGAAATTCAAAAGGCCAGCATTATTTCTCATTTGCTTTGGAAACATGCCGTAAAGAAACCACTAAAATGTCCTTTTTGCAATGAACGAGTTGTTAAAAATAACGCTCGGTTATCACATATGTCACGTTGTCATCCAGATGCTTATAAATGCAATGAGTGTAATCTTCAATTTGTAAAACATAGTCTTTTTGTTGAGCACATGTGggaatttcattttgtgaaaataacaACACCAGCTTCAAGTGGAGAGGAAGAAGATCTTCAAATTAATGACATGTATTTTGTTTGTAATAGAAATGAAGATGAGATAATTATAGAGCCTGAGCACAATTATTTGCAAGTAAATCAGAATCAGGAGAAGATGTTTGGTTGCCAATTTTGTCCAAAGAAATTTACAtccaacaaaaatttattaattcataagagccacaaacataaaaatgaatctttTGAACCACTTAATGCTGTTGAGACAATAATGGATACAAGTGATAATTCAATGACATTTGAAGAGTTTCAAAATAATTGGGTGGAAGTTATTAATGATAATGACATGAAATGTTTAGTTTGTGACCAAACAATTAAAACGAAAAGCTTCATTCCACATATTAAACACAAACATTGCACTTCTGGAGCATATTTATGTGCCATTTGTCCTGAGAGGTTTTATAGACCTGAGCAACGAACACAACACATGTCATCATCTCATCGCGGTGTCTTTTATTGTAGCACGTGTAACATTCAATTTTACCGCAACTCTCGATATGCGGAACATATGTCTACAGTACATGCAATAGATCTTGATGGTACAGATAATTATGAAGTCGatcttaatttaattgatcTTCGTTTTGAGCCAACAATCAGGAGAAGTCCTGATGAAGACAGTCTCCCTTCTATTGTTCACGAAACAGATGAAAATGATCCAATGGAAGAAATGATGCAACAAATCAACACTGGAgaagaattttcaagaaaCGAGTTTATGCGTCGATTTATTAAAGGAAGTGGTAATGATAGACACTGTCTTGCATGTAACAGAACGTTCTTCCACACTTCAATTTATCATCacatcattcattttcatgcaTCTATTCTTCCATTTAAATGTCCTTTTTGTGACGTTCGTTTTGAACGTTCATATACAAGAAATAAACACTTACAATTGTTTCATCCAAAAGAGtaTAAATGTTTTGAATGTGGATTGCAATTCCCAAAACATGCAAAATATGTCGATCATATGGCAATTGAACATAATGTAACTGTAGCAACACAAAAGAGTCCTTTTGAGGAAGAAGACTTGGCATCTACTGATATTCGttacgttaaaaataaatcaaatgaagaaaatgtttgGCAAGAAATAGACGAAAATTCAATTGGTAATTCAACTATGTATTcagaatataatgaaaaacCATCTACATCATCTACATCGTTTAATAACAAGACTGATAATTCTCATGATTTGAGATCACGTATCAAAAACGAACCCACAGAAAGCACTGCATTATCTGTAAAcacttcaaaaataaatgattcaaCTACAGAGCAGCATTTatatgaagaatttaaagCTAAATatctaaagaaaattgatCGAATTAGCTTAAAATGTTTGGCTTGTGATAGAGTTGTTATTAGAACATCAGTTTGTGCTCATTTACGTTTATGGCATGCTGCTTCAATGATGTTTAATTGCGAATTGTGTGATGTAGGATTTAGAAGATCTGACTATAGACAAAGGCATATGATTACAAATCATCCAAATGACCATAAATGTAAACAGTgcaatttgcaatttcatCATTCAAGTCTTTATAAAGAACATATGTATGAAGCACATAAGCTGATTGTGAATGTTagaatgttaaaaaaaagagatgaagTAGATGTACCATTGGAAAAAATGATGTTTTCTGTACATATTCCTGATAATCTTAGAgttCATCCTGCTGATGAGCATTCGAAACGTGGAAGAAGACTTTCTATTTGTATGGATGGTCCAGTTAATCCGAATGCCGGTGGAATAACTTATGAGGACTTTCAAAAAAGATATATGCAAGAACTTAATGAATCTTTATATAGATGTACTGTTTGTGACGATACATTATCTAAGTTTGCATTGAAGAAACATGCAAAAAGATTTCATGCTACAAGTAAGCCTTACAATTGTGAACTATGTAGTCAAGGTTTTCATCGACTTGACGAGAGGCTTACTCATATGCATGATTCACATAATCAAGCACTAAAATGTAAAGAATGCAATATACAATTTTACATGTCATTCGATTATGCCGAACACATGCGTAATATGCatcatatttcaataaatataagCTCTAATAAATCCAAAACTGATATCGATGTACCATTACAACGTTTGCGATTCGTCCCGAAAAGAATCGATGATTCGTCGATGACAAAACCTATTGCGATTAAATCAGAACcatctaaaaaaaattcagtgGAGACTTACAATGATATATCGGATGATGCCCAATTAACACGagatcaattttcaaaaaaatttcttcgtgCTTTTCGTGGAAAAGATAATGAGCTTATGCTAAAATGTTCAGCATGCAATAAGCAATTTGCAGCAAAACATAAATTCTTTCACTTGCTCCATAATCATGTAATCGTAAGACCATTTGGTTGTGAGCTATGTGACATGAGattctattcaaattttaaaagacttAATCACATGAAAATGCGTCATCAAAACGACTTTAACTGTCAAATCTGCAGTACACAGTTTGAAAAGGCACAAATATATGTTGATCACATGCTGAATGAACATAAAATCACAGTGAAAGCACAAGAATCAACAAATGTCGATTTAAAAACTCAAGATCTTCGTTACTTGAAAAATCCAGAAGGATTTCGATCAGATTGGAGACGATTAGATTATTCCTCTTCATCGAATACTGCTGGAAATACAAATACTACAGCTGATGAgtctgaaaattcaaattatgcaTCCACAGAAACACTTTTCTGTGACATTTGTAATGTTGATTTTAGTTCAGCAAGAACTTATAGACAACATATTCGAGATCATGGTAATGGAGGGgatttactaaaaattgaaattaaacagGAACCAAAAATTAATACAGAAATTCAGAAAGAAGGAACATTTCAATGtgaattttgtgataaaaaagtaATGACACTTTTCGctttaaaaatgcataaaaaattcaaacatggTGAAGGAGCTGATAGTGGtgtgttaaaaagaaaaattgaaaaacaaaaattcgaaGTAGAGTGCCAAATGTGTTCATTTTCAGCATTTAGACGTGATTATGTTGAACATCACATTAGACAAACTCATAAACTTGAATTTCAGTGTCGTTTATGCACAAGAGTACTcagtaatttcaatttttatacttatcatgtttttaaatatcacGGTATACGAGAAGATccactaaaatattttaaatgtgatGATTGCAATGCTTGTTTCAAATTTGaggaaaatttacaaaaccaTAAACAGGCGCGACATGGTGAAAATACTCCAACAAGAAATTACTTTTGCGAAACATGTGTCGTTGATTTTCGCTCACGTTCTAGCTTAGATAGTCATTTAGAAATGTATTCTCATAGACATTTGTACGATTTTCTTGGAAATCCTGATAAAGAATTCAAACTTGAACCAGTTGAAAAATCTGCTTTATCACAtcatgaagaagaaaatttttcgtttgATGAACCACAAGAGAAACGACAAAAAACATCTGATAATATCGAAGTTTCGGATGATGATAAATtggattatttaaaatatatgcaTACAACAGCAGACGGTCATTTCAAATGTGGAATATGTGGAAAAACAAAAGCTTTACGAAAATACATGCTTCATCATCTTAAGCAACACAAAGAAGTTCCAACTTATGAATGCAATAAATGTCCGGAGCGctttgtatttaaaaagaaatatgaacAACATCTAGAAATGCATGaacatgaaaatgttttagaaCACCCTGCAATTACAATTGATCATGATGAAAGCCAAGGTAGTAGTAGTAACAGCGTGAAACccgttgaagaaattttttgtaaaatttgcaaCAGTTCATTCAAATTGACAATAATGCTTAACAAACATAATTCAATTTGGCATGCGAATGATAATCCAGATAAGCATCTCTcaatgaatgaacaaaaagcaaagaaaaatgaatcgTCAAAATTAAACTGTccaaattgtaatttaatttttgatgacatgaaatttttagaaaatcatctaaaatatttctgtGTTCATCGCAATCAATTAAATAACACTGACGAATTGTTGAATGAACAATAG
Protein Sequence
MDTKVSSDSRKVCRTCLRNCESKKGLISLFDYDQTCPQDRIKFSKMLSVISNQRISEDDCLPKKVCVMCISQIRAFYYFKIQVDESLKTLQLQRANKEHQQYRIPTIKQEPNTSMPLIMSPRTVGENNEEIEREENMLEEIISPVPHNSSNKSNKLEGDSHTDDEIIDYEPDMQNYDDDEDEQQEEGEEITADNSMKSSSQIDAPKGKSPDSGISSSTPNHASKTPICNVCKKEFVNLKAFFLHKRGSCSSTKCRYCVKKFNNFAQLKLHTRYKHPEKYNELKLNFQKATVQLERITKFNECSTCGVKLVSKLALLRHHADCDSKCIECGIKIPRKEFYFKHLESVHKLNADPSSLECPFCMNIFHSERILQEHIQRLHPDENQSEHQSFTDTMSEAGESTSNEPFLYECQICQARFKSSKSLNQHKSFKHKDGQENVNRIYKNHIVQKYSRDEFFEKFLVKKSDDFYRCLPCQKEIFKRSLMMHVKSKHAAVRSYRCELCPEAFFRADYRQRHFAIAHPYDFKCHECDVQFDRAYKYDVHMTQHGIKQTHFKPNEGCDRYDLSPNEIQYIEDSTNYDYSNDDALIKNDNNEVISAISNSTEIPMKKDEFCDKYLISVSEIMVNCLICQQEIQKASIISHLLWKHAVKKPLKCPFCNERVVKNNARLSHMSRCHPDAYKCNECNLQFVKHSLFVEHMWEFHFVKITTPASSGEEEDLQINDMYFVCNRNEDEIIIEPEHNYLQVNQNQEKMFGCQFCPKKFTSNKNLLIHKSHKHKNESFEPLNAVETIMDTSDNSMTFEEFQNNWVEVINDNDMKCLVCDQTIKTKSFIPHIKHKHCTSGAYLCAICPERFYRPEQRTQHMSSSHRGVFYCSTCNIQFYRNSRYAEHMSTVHAIDLDGTDNYEVDLNLIDLRFEPTIRRSPDEDSLPSIVHETDENDPMEEMMQQINTGEEFSRNEFMRRFIKGSGNDRHCLACNRTFFHTSIYHHIIHFHASILPFKCPFCDVRFERSYTRNKHLQLFHPKEYKCFECGLQFPKHAKYVDHMAIEHNVTVATQKSPFEEEDLASTDIRYVKNKSNEENVWQEIDENSIGNSTMYSEYNEKPSTSSTSFNNKTDNSHDLRSRIKNEPTESTALSVNTSKINDSTTEQHLYEEFKAKYLKKIDRISLKCLACDRVVIRTSVCAHLRLWHAASMMFNCELCDVGFRRSDYRQRHMITNHPNDHKCKQCNLQFHHSSLYKEHMYEAHKLIVNVRMLKKRDEVDVPLEKMMFSVHIPDNLRVHPADEHSKRGRRLSICMDGPVNPNAGGITYEDFQKRYMQELNESLYRCTVCDDTLSKFALKKHAKRFHATSKPYNCELCSQGFHRLDERLTHMHDSHNQALKCKECNIQFYMSFDYAEHMRNMHHISINISSNKSKTDIDVPLQRLRFVPKRIDDSSMTKPIAIKSEPSKKNSVETYNDISDDAQLTRDQFSKKFLRAFRGKDNELMLKCSACNKQFAAKHKFFHLLHNHVIVRPFGCELCDMRFYSNFKRLNHMKMRHQNDFNCQICSTQFEKAQIYVDHMLNEHKITVKAQESTNVDLKTQDLRYLKNPEGFRSDWRRLDYSSSSNTAGNTNTTADESENSNYASTETLFCDICNVDFSSARTYRQHIRDHGNGGDLLKIEIKQEPKINTEIQKEGTFQCEFCDKKVMTLFALKMHKKFKHGEGADSGVLKRKIEKQKFEVECQMCSFSAFRRDYVEHHIRQTHKLEFQCRLCTRVLSNFNFYTYHVFKYHGIREDPLKYFKCDDCNACFKFEENLQNHKQARHGENTPTRNYFCETCVVDFRSRSSLDSHLEMYSHRHLYDFLGNPDKEFKLEPVEKSALSHHEEENFSFDEPQEKRQKTSDNIEVSDDDKLDYLKYMHTTADGHFKCGICGKTKALRKYMLHHLKQHKEVPTYECNKCPERFVFKKKYEQHLEMHEHENVLEHPAITIDHDESQGSSSNSVKPVEEIFCKICNSSFKLTIMLNKHNSIWHANDNPDKHLSMNEQKAKKNESSKLNCPNCNLIFDDMKFLENHLKYFCVHRNQLNNTDELLNEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01249557;
90% Identity
-
80% Identity
-