Basic Information

Insect: Polypedilum pembai
Gene Symbol: -
Assembly: GCA_014622435.1
Location: JACWBX010002609.1:779-7741[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.021 0.95 10.0 0.2 2 21 224 243 223 244 0.94

2 29 0.044 2 9.0 3.0 2 23 250 272 249 272 0.96

3 29 0.05 2.3 8.8 0.2 2 20 298 316 298 317 0.94

4 29 0.0019 0.09 13.2 1.9 1 23 405 428 405 428 0.93

5 29 0.012 0.57 10.7 0.1 1 23 493 516 493 516 0.93

6 29 0.018 0.81 10.2 1.0 1 23 520 542 520 542 0.97

7 29 2.4 1.1e+02 3.5 1.9 2 23 650 672 649 672 0.95

8 29 0.00084 0.039 14.4 2.0 1 20 676 695 676 697 0.98

9 29 0.018 0.82 10.2 3.7 3 23 752 773 750 773 0.92

10 29 0.0022 0.1 13.1 0.2 1 23 841 864 841 864 0.94

11 29 0.011 0.51 10.9 1.2 1 23 868 891 868 891 0.96

12 29 0.00085 0.039 14.4 2.4 1 23 996 1019 996 1019 0.97

13 29 0.012 0.58 10.7 0.6 1 23 1023 1046 1023 1046 0.96

14 29 0.0026 0.12 12.8 0.4 1 23 1192 1215 1192 1215 0.93

15 29 0.16 7.4 7.2 5.3 1 23 1219 1242 1219 1242 0.94

16 29 0.75 34 5.1 1.4 1 23 1361 1383 1361 1383 0.96

17 29 0.47 22 5.7 1.5 1 23 1389 1412 1389 1412 0.92

18 29 0.019 0.9 10.1 1.2 1 23 1416 1439 1416 1439 0.97

19 29 0.81 38 5.0 1.2 3 23 1554 1575 1552 1575 0.96

20 29 2 92 3.8 0.2 1 23 1579 1602 1579 1602 0.91

21 29 0.0017 0.08 13.4 0.8 1 23 1667 1689 1667 1689 0.97

22 29 1.8 81 3.9 1.7 1 23 1716 1739 1716 1739 0.91

23 29 2.3 1e+02 3.6 0.7 2 23 1760 1782 1759 1782 0.94

24 29 0.00054 0.025 15.0 6.2 1 23 1819 1842 1819 1842 0.97

25 29 0.19 8.7 7.0 0.6 1 22 1851 1872 1851 1875 0.89

26 29 1.1 49 4.6 2.7 1 23 1945 1967 1945 1967 0.94

27 29 0.0015 0.069 13.6 1.0 1 23 1973 1995 1973 1995 0.98

28 29 0.054 2.5 8.7 0.8 2 23 2023 2045 2022 2045 0.91

29 29 0.045 2.1 8.9 0.1 3 21 2071 2089 2069 2090 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.021	0.95	10.0	0.2	2	21	224	243	223	244	0.94
2	29	0.044	2	9.0	3.0	2	23	250	272	249	272	0.96
3	29	0.05	2.3	8.8	0.2	2	20	298	316	298	317	0.94
4	29	0.0019	0.09	13.2	1.9	1	23	405	428	405	428	0.93
5	29	0.012	0.57	10.7	0.1	1	23	493	516	493	516	0.93
6	29	0.018	0.81	10.2	1.0	1	23	520	542	520	542	0.97
7	29	2.4	1.1e+02	3.5	1.9	2	23	650	672	649	672	0.95
8	29	0.00084	0.039	14.4	2.0	1	20	676	695	676	697	0.98
9	29	0.018	0.82	10.2	3.7	3	23	752	773	750	773	0.92
10	29	0.0022	0.1	13.1	0.2	1	23	841	864	841	864	0.94
11	29	0.011	0.51	10.9	1.2	1	23	868	891	868	891	0.96
12	29	0.00085	0.039	14.4	2.4	1	23	996	1019	996	1019	0.97
13	29	0.012	0.58	10.7	0.6	1	23	1023	1046	1023	1046	0.96
14	29	0.0026	0.12	12.8	0.4	1	23	1192	1215	1192	1215	0.93
15	29	0.16	7.4	7.2	5.3	1	23	1219	1242	1219	1242	0.94
16	29	0.75	34	5.1	1.4	1	23	1361	1383	1361	1383	0.96
17	29	0.47	22	5.7	1.5	1	23	1389	1412	1389	1412	0.92
18	29	0.019	0.9	10.1	1.2	1	23	1416	1439	1416	1439	0.97
19	29	0.81	38	5.0	1.2	3	23	1554	1575	1552	1575	0.96
20	29	2	92	3.8	0.2	1	23	1579	1602	1579	1602	0.91
21	29	0.0017	0.08	13.4	0.8	1	23	1667	1689	1667	1689	0.97
22	29	1.8	81	3.9	1.7	1	23	1716	1739	1716	1739	0.91
23	29	2.3	1e+02	3.6	0.7	2	23	1760	1782	1759	1782	0.94
24	29	0.00054	0.025	15.0	6.2	1	23	1819	1842	1819	1842	0.97
25	29	0.19	8.7	7.0	0.6	1	22	1851	1872	1851	1875	0.89
26	29	1.1	49	4.6	2.7	1	23	1945	1967	1945	1967	0.94
27	29	0.0015	0.069	13.6	1.0	1	23	1973	1995	1973	1995	0.98
28	29	0.054	2.5	8.7	0.8	2	23	2023	2045	2022	2045	0.91
29	29	0.045	2.1	8.9	0.1	3	21	2071	2089	2069	2090	0.95

Sequence Information

Coding Sequence: ATGGACACACAAGTCCTAATTGATGACCAAAGGGTTTGCAGAACCTGCTTAAAGCATTGTGAATCAAGAAAATCTTTGATTTCTCTTTATGATTACGATCAAACATGCCCGCAAGATAAAATCAAATTCATTAAAATGCTCAGTACAATTTCCAATCAAATGGTTTTTGAAAATGATTCATTTCCAAAAAGAGTGTGTTTGATGTGTATATCACAGATCAGAGCATCTTATTATTTCAAAATTCAAGTTGAGGAATCCTTAAAAATACTCCAACTCAAAAAAACTAGAATAGAACAACAGTATCGCACAGCCATAATCAAACAAGAACCATGTACATCTACGTCATTAATTATGTCTCCAAGGACAATAATCGAAAATAATTATGAAGAGATTGAAAGAGAAGAGAATATGCTCGATGAAATCGTTTCACCATCTTCTCAAACTTTGAACAAGAGTATATCGTTTAACAATAGTAGACATGAGGGAGATTCTCATACAGATGATGAAATAATTGATTATGAGCCAGATATGCATAATGATTATGAGGAAGAAAGTGAGGAGCATGAGAAGGAAGAAGAAGTTAATATTCATGATACTTCTCCTAATCAAATTAATGTAGCGAGCTTTGACAGTGACATGAGACCACTTAATGATTCCTCTAAAACTATAAGTTGTAATGTGTGTAAAAAAGAATTTGACAACCTAAAGGCTCTTTTCTTGCATAAACGAGGAAATTGTTCTTCAACAAAATGTCGTTATTGTTTGAAAAAGTTTGGTAATTTTGCACAATTGAAACTACATACACGGTATAAACATCCAGAGAAATATAACGAACTCAAATTAAATTTCCAAAAAGCGACAGTTCAGTTGGAGAGAATTACAAAATTCAATGAGTGTTCTACTTGCGGCATTAAATTTGTGAGTAAATTAGCACTACTACGTCACCATGCAGATTGCGACAGTAAATGTATCGAATGTGGTGTGAAAATCCCTAGAAAAGAATTTTATTTCAAACATTTGGAAAGTGCACATAAACTAAACGCGGATCCATCATCTTTGGAATGTCCATTTTGTATGAACACTTTTCATTCAGAAAGAATATTACATGAGCACATTCAACGCTTACATCCAGATGAAAATCAATCAGAACATCAGTCTTTCACTGACACAATTAGTGAAGCTGGAGAAAGCACAAGTAATGAATCATTCTTATTTGAATGTCAAATCTGTCAGGCACGCTTTAAATCTTCGAAAAGTTTAAATCAACATAAAAGTTTAAAACACAAGGATGGACAAGAAAATTTTCATAAGATTTATAAGAATCATACCATTCAAAAATATTCAAGAGATGAATTTTTTGAAAAATTTTTGGTAAAAAAATCTGACGAATTTTATCGATGTCTCCCTTGTCAAAAAGAAATATTTAAAAGATCATTAATGATGCATGTCAAAAGTAAACATGCAGCAGTGCGCAGTTATCGTTGTGAATTGTGTCCAGAGGCATTTTTCAGAGCTGACTATCGTCAAAGGCATGTTGCTTTAATTCATCCACATGACTTTAAATGCTATGAATGTGATGTGCAGTTCGACAGAGCATATAAATATGATGTTCATATGACTCAGCATGGAGTTAAGCAAACACGCTTCAAACCGAATGAAGGAAGTGATCGTTATGATCTCTCACCCACTGAAATAATGTATATTGAGGATTCAACAAATTATGATTACACAAATGACGATGCATTTATCAAGACTGATACCAATGAGATGACATCAAACGCGGCATCATTCTCAAATGAAATTCCACTGAAAAAAGATGAATTTTGTGAAAAATACTTAGTGTCAGTAAACGAAATTATGGTTAATTGCACAATATGTCAGCAGGAAATTCAAAAGGCAAGCATAATTTCGCATTTACTTTGGAAACATGCTGTGAAAAAACCTCTCAAATGCCCTTTTTGTAATGAACGAGTTGTTAAAAATAATGCCAGATTATCGCATATGTCAAGATGCCATCCAGATGCCTACAAATGCAACGAATGTAATCTCCAGTTTACGAGACATAGCCACTTCGTTGATCATATGTGGGAGTTTCATTTAATCAGAATAACAACGCCTGCATCAAGTGGAGAAGAAGAAGATCTTCAAATTAATGACATGTATTTTATTTGCAATCGTAATGAAGACGAGATAATTGTAGAACCAGAACAAATTAACCTTCAAATGAATCAAAATCAAGAGAAAATGTTTGGTTGTCAGTTTTGCCCCAAGAAATTTACATCTAACAAAAATTTATTGATTCACAAGAGTCACAAACATAAAAATGAGTCCTTTGAACCGCTCAATGCTGTTGAGACAATAATGGATACAAGTGATATTTCGATGACATTTGAAGAGTTTCAAAGTAATTGGGTTGAAGTGATTAATGAGCATGATATGAAATGTCTAGTTTGCGATCAAATAATAAAAAGAAAGAGTTTCATTCCACATATCAAGCATAAGCATTGTACTAGTGGAGCTTACTTATGTGCCATTTGTCCAGAAAGTTTTTATAGACCAGAGCAACGAACTCAACATATGTCATCATCACATCGCGGTGTCTTTTATTGCAGTACATGCAACATTCAATTTTATCGCAACTCTCGATATGCAGAACATATGTCTTCAGCACACGCAATAGAACTTGATGGCCGAGATAATTATGAAGTCGATCTGAACTTGAATGATCTTCGTTTTGAGGCGACAATTAGAAAAAATCCAGATGATGACAGTCTTCCTTCTATTGTTCACGAAGCAGATGAAAATGATCCTATAGAAGATATGATGCAGCAAATAACTACTGGTGAAGAGTTTTCAAGAAATGAGTTTATGCGTCGATTTATAAAAGGAAGTGGTAATGATAGACATTGTCTTGCTTGTGATCGAACATTCTTTCACACTTCAATCTATCACCACATCGTTCATTTTCATGCCTCAACTCTTCCATTCAAATGTCCTTTTTGTGACGTTCGTTTTGAGCGCTCGTATACAAGAAATAGACATATGCAACTATTCCATCCAAAAGAGTATAAATGTTTTGAATGTGGATTACAATTTCCAAAACATGCTAAATATGTTGACCATATGGCAATAGAACACAATGTGACTGTAACAACTCAAAAGAGTCCTTTCGAAGAAGAAGATTTGACATCTACCGACATTCGTTATGTCAAAAACAAAGTAAACGAAGAAAATGTTTGGCAGGAGGATGAATACCCTATTGGCAATTCAACTATGTTATCAGAATATAACGAAAAGTCATCTACATCATCATCAACATTTAATAATAAAACTGATAATTCCCATGACTTGAGACCTCGTATCAAAAATGAACCTACAGAAAGCACTACTTTGACAGTGACTTGTTCAAAAACAACAAATTCATCAACAGAGCAACACTTGTATGAAGATTTTAAGGTCAAATATCTTAAAAAAATTGATCGAATTAGTTTAAAATGCTTGGCTTGTGATAGAGTTGTCATTCGAACATCAGTGTGCGCTCATCTACGTTTATGGCATGCTACATCAATGATGTTCAACTGCGAATTGTGTGATGTAGGTTTTAGAAGATCTGATTATCGACAAAGACACATGGCCGCAAATCATCCAAATGAACATAAATGTAAACAATGTAATTTACAATTCCATTATTCAAGTTTATATAAAGAACATATGTACGAAGCTCACAAACTGATTGTGAATGTTAAAACCCTAAAGAAAAGAGATGAGGTTGATGTACCATTGGAAAAAATGATGTTTTCTGTTCACATTCCTGATAATCTCCGTGTTCATTCAGCTGATGAGCATTCAAAACGAGGAAGAAGACTTTCTGTTTGCATTGATGGTCCAGTTAATCCTAATGCAGGTGGAATGACTTACGAGGAGTTCCAAAGAAAATATATGCAAGAACTCACTGATGAGCATTCAAAACGAGGAAGAAGACTTTCTGTTTGCATTGATGGTCCAGTTAATCCTAATGCAGGTGGAATGACTTACGAGGAGTTCCAAAGAAAATATATGCAAGAACTCAGTGAATCCACATATAAATGTACTGTTTGTGATGATACATTATCTAAATTTGCATTGAAAAAGCATGCAAAAAGGTACCATGCAACCAGTAAACCCTACAACTGTGAATTATGTAATCAGGGTTTTCATCGACTCGATGAAAGACTCACCCACATGTATGATTCACACCACCAGGTACATAAATGTACAGAATGTGGTGTACAATTTTACATGTCATTGGATTATGTCGAACATATGCGTAATATGCATAGCATTACAATCAACATCAGTTCAAAAAAGTCTAAAACAGATATTGATGTACCTCTTCAACGTTTGAGATTTGTACCGAGAAGGATTGATGACAGTAATCCATCAACAAAATTTGAAGAAATTAAATCAGAACCAGTAAAGAAAAGTATAGTGGAGTCGTTAAAAGACGTACCAGATGATGCCCAATTGACTCGAGATCAATTTTCAAAAAAATTCTTACGCGCATTTCGTGGAAAAGACAACGAGCTGTTACTTAAATGTTCAGCATGCAATAAACAATTCGCAGCAAAACATAAATTCTTTCATTTATTGCATAATCATGTCATCGTTAGACCATTCGGTTGCGAACTTTGTGATATGAGATTTTATTCAAACTTTAAAAGACTTGGTCACATGAAAATGCGCCATCCAAACGACTTCAATTGTCAAATCTGTAGCATACAATTCGAAAAGGCACAAGTGTATGTTGATCACATGTTGGATCAACATAAAATTACAGTCAAAGCAGCGGAGTCAACAAATGTAGATATAAAAAATCATGATCTTCGTTACTTGAGAAATCCAGAAGGAATTCGATCAAACTGGAGGCGATTAGATTCTTCCTCGTCTATAAATATTGCTTCAACCAATTCATCAATCGTTAATGAGTCTGAAAATTCTAATTACACGTCCGCAGAGTCGTTCTTCTGTGACATTTGTAATATTGATTTTAATTCCGCAAGAACTTATAGACAACATATTCGAGATCATGGCAATGGAGCAGAGTTATTAAAAACAGATATTAAAAAAGAACCAATTATTAATCCAGAAATTCAAAGAGAAAGTACGTTTCAATGCGATTTATGTGATAAAAAAGTATTAACACTTTTTGCTTTGAAAATGCATAAAAAATTTAAGCACGATGAAAGTAATGACAGTGGTATTCTAAAACGAAAGATTGAAAAACAAAAATTTGAGGTTGAGTGTCAAATATGCGCCTTTACTGCTTTTAGACGTGATTATGTTGAGCATCACATTAGGCAAACTCACAAACTCGAATTTCAGTGTCGCCTATGTACAAGAGTACTCAGTAACTTCAATTTTTATTCCTATCATATTTTTAAGAATCATGGTATACGAGAGGACTCGTCAAAATATTTTAAATGCCAAGAATGCAATGCTTGCTTCAAATTTGAAGAAAATCTGCAAAAACATATGCATTCACGACACGGTTCAAATACACCAATTAGAAACTTTTTTTGTGAAACATGTGTCGTTGATTTTCGTTCACGTTCTAGTTTAGATAGTCATTTGGAAATGTATTCACATCGACATTTGCACGAATTTCTTACAAATTCCGGTAAAGAATTTAAATTAGAACCTAATGAAAATTCTGTAATATCGCACCAAGATGAAGAAAACTTTTCGTTTGAAGAGCCACAGGAAAAGCGTCAAAAAATAACCGATAGCATTGAAGTATCGGATGACGATAAATTAGATTATTTAAAATATATGCATACAACAGTAAACGGTCATTTCAAATGTGGAATTTGTGGTAAAACTAAAGCTTTACGAAAATATATGCTTCATCATCTAAAGCAACACAAAGAAGTGCCAACTTATGAATGTGACAAATGTCCGGAGCGCTTTGTTTTCAAGAAAAAATATGAACAACATCTAGAAATGCATGAAAAAGAAAGTGTTTTAGTGATTGATCATGAAAAAGATATCCATGGCAGTAAAAGCAACGTAAATTCAATTGATGAAATTTCCTGTAAAATTTGTAACAGTACATTTAAATTGAAAATAATGCTTAATAAGCATAATAACCTTTGGCATGCGACTGATAATCCAGATAGGTATCTTACCATGAATGAACAAAAAACCAAGAAAAATGAATCTACAAAAATAAATTGTCCGAATTGTAATTTGGTTTTTGATGATATTAAGTTTTTAGAGAATCATCAAAGATTTTTCTGTGTTCATCGTCACCAAACCAATAACGATAATGAATCGGTAAATGAACAATAA
Protein Sequence: MDTQVLIDDQRVCRTCLKHCESRKSLISLYDYDQTCPQDKIKFIKMLSTISNQMVFENDSFPKRVCLMCISQIRASYYFKIQVEESLKILQLKKTRIEQQYRTAIIKQEPCTSTSLIMSPRTIIENNYEEIEREENMLDEIVSPSSQTLNKSISFNNSRHEGDSHTDDEIIDYEPDMHNDYEEESEEHEKEEEVNIHDTSPNQINVASFDSDMRPLNDSSKTISCNVCKKEFDNLKALFLHKRGNCSSTKCRYCLKKFGNFAQLKLHTRYKHPEKYNELKLNFQKATVQLERITKFNECSTCGIKFVSKLALLRHHADCDSKCIECGVKIPRKEFYFKHLESAHKLNADPSSLECPFCMNTFHSERILHEHIQRLHPDENQSEHQSFTDTISEAGESTSNESFLFECQICQARFKSSKSLNQHKSLKHKDGQENFHKIYKNHTIQKYSRDEFFEKFLVKKSDEFYRCLPCQKEIFKRSLMMHVKSKHAAVRSYRCELCPEAFFRADYRQRHVALIHPHDFKCYECDVQFDRAYKYDVHMTQHGVKQTRFKPNEGSDRYDLSPTEIMYIEDSTNYDYTNDDAFIKTDTNEMTSNAASFSNEIPLKKDEFCEKYLVSVNEIMVNCTICQQEIQKASIISHLLWKHAVKKPLKCPFCNERVVKNNARLSHMSRCHPDAYKCNECNLQFTRHSHFVDHMWEFHLIRITTPASSGEEEDLQINDMYFICNRNEDEIIVEPEQINLQMNQNQEKMFGCQFCPKKFTSNKNLLIHKSHKHKNESFEPLNAVETIMDTSDISMTFEEFQSNWVEVINEHDMKCLVCDQIIKRKSFIPHIKHKHCTSGAYLCAICPESFYRPEQRTQHMSSSHRGVFYCSTCNIQFYRNSRYAEHMSSAHAIELDGRDNYEVDLNLNDLRFEATIRKNPDDDSLPSIVHEADENDPIEDMMQQITTGEEFSRNEFMRRFIKGSGNDRHCLACDRTFFHTSIYHHIVHFHASTLPFKCPFCDVRFERSYTRNRHMQLFHPKEYKCFECGLQFPKHAKYVDHMAIEHNVTVTTQKSPFEEEDLTSTDIRYVKNKVNEENVWQEDEYPIGNSTMLSEYNEKSSTSSSTFNNKTDNSHDLRPRIKNEPTESTTLTVTCSKTTNSSTEQHLYEDFKVKYLKKIDRISLKCLACDRVVIRTSVCAHLRLWHATSMMFNCELCDVGFRRSDYRQRHMAANHPNEHKCKQCNLQFHYSSLYKEHMYEAHKLIVNVKTLKKRDEVDVPLEKMMFSVHIPDNLRVHSADEHSKRGRRLSVCIDGPVNPNAGGMTYEEFQRKYMQELTDEHSKRGRRLSVCIDGPVNPNAGGMTYEEFQRKYMQELSESTYKCTVCDDTLSKFALKKHAKRYHATSKPYNCELCNQGFHRLDERLTHMYDSHHQVHKCTECGVQFYMSLDYVEHMRNMHSITINISSKKSKTDIDVPLQRLRFVPRRIDDSNPSTKFEEIKSEPVKKSIVESLKDVPDDAQLTRDQFSKKFLRAFRGKDNELLLKCSACNKQFAAKHKFFHLLHNHVIVRPFGCELCDMRFYSNFKRLGHMKMRHPNDFNCQICSIQFEKAQVYVDHMLDQHKITVKAAESTNVDIKNHDLRYLRNPEGIRSNWRRLDSSSSINIASTNSSIVNESENSNYTSAESFFCDICNIDFNSARTYRQHIRDHGNGAELLKTDIKKEPIINPEIQRESTFQCDLCDKKVLTLFALKMHKKFKHDESNDSGILKRKIEKQKFEVECQICAFTAFRRDYVEHHIRQTHKLEFQCRLCTRVLSNFNFYSYHIFKNHGIREDSSKYFKCQECNACFKFEENLQKHMHSRHGSNTPIRNFFCETCVVDFRSRSSLDSHLEMYSHRHLHEFLTNSGKEFKLEPNENSVISHQDEENFSFEEPQEKRQKITDSIEVSDDDKLDYLKYMHTTVNGHFKCGICGKTKALRKYMLHHLKQHKEVPTYECDKCPERFVFKKKYEQHLEMHEKESVLVIDHEKDIHGSKSNVNSIDEISCKICNSTFKLKIMLNKHNNLWHATDNPDRYLTMNEQKTKKNESTKINCPNCNLVFDDIKFLENHQRFFCVHRHQTNNDNESVNEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01250599;
90% Identity: -
80% Identity: -