Pvan010817.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- -
- Assembly
- GCA_018290095.1
- Location
- CM031379.1:19296006-19297431[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-10 2.5e-07 30.5 12.0 4 42 108 145 105 149 0.92 2 2 0.004 6.5 6.7 0.8 28 43 380 395 370 399 0.87
Sequence Information
- Coding Sequence
- atgtgTGATGATTcaatgcaaaattataatcaaaatcctgtcaattttccttttcaaaaagaaaaaactgaaatatttgatttaacttttgatggaaataaaaaagcaaattctTCTTTCACTGATAATTCACAACATTTTGCATCAACAACTTTTACAAATTCTACAACAAATTATCAAAGTGAATCAAATTCTAATCTAAACCTACAACTTTTATCACCACCCCCagcaaaaataagaattttaacaGAACCATTAAACAATTATAATAATTCTATGCCGTCGTCATCCTCTCAAGGATTCAACACTCCACATGTTCGTATGTGTAGAAAATGTTCATTCCATGGTCAAAAAAATCCTTATAAAAATCATACTTCATGTCCTTACAAGTTTTGTATATGCAGTGAATGTCAAATACTAAATGCTCGTAAACAAAAGCGAAAAGATTTCTATAACAGATTCAATTTATCTCTTCAAGTGCCAAAACTAGATTCAACAATAGAAAAAGCTTTTGActcaacaaaaaatgattcattgaaaattcgtCATGAAGATAAAGTTGAATGGATTCAATATACAAATGATTTGGATAAAGGATTTTTAGTTGAAGGTGGAAAAACTAATACAGGTGTTATTTCATATATTGGaagAGGATATCATAATGGTCATCTTTTACCAACTGCAATTTTTCCTTCAACAAATCCTAATAATATTGCATTATTTAAAAGCACATTAAATGGTAACGTTTATCATTTAGTCAATTGTGAAGCACTCATCATAGCCGAttttgaatggaaaaaaaatgaaatgggAAAAATACCATCAAATGCAGTTTTCTGCGGGATAGTAAATGATGATTTTCAGTATGTAGGAAGAGCTCTTTATAATGAATCAATAATTATTGGAAGAGTATCAAAGGAAAGTGGATGTCTTTATATTCTTTatggaaatgaagaaattttaattcaatcttTTGAAGTTCTTGTGGataaaaataatgacattACTTTGActgatGAAGTTCCTTCTCAGCCTACATTTGATGTTCCAACAAAACCATCAAGAAATATAAATGAGAATCAATGCACAATTTGTTTTGAGTCACCTGTTGTAGGGATATTTAAGGAATGTATGCATGCTTGTCTATGTGCTGATTGTATTGATATTgtaaatagaaagaaagagtaCAATGGTAAAGTCATGTGTCCGATCTGCAGAAAGTTAAATTAtaaagctgaaaaatttttcatggtttaa
- Protein Sequence
- MCDDSMQNYNQNPVNFPFQKEKTEIFDLTFDGNKKANSSFTDNSQHFASTTFTNSTTNYQSESNSNLNLQLLSPPPAKIRILTEPLNNYNNSMPSSSSQGFNTPHVRMCRKCSFHGQKNPYKNHTSCPYKFCICSECQILNARKQKRKDFYNRFNLSLQVPKLDSTIEKAFDSTKNDSLKIRHEDKVEWIQYTNDLDKGFLVEGGKTNTGVISYIGRGYHNGHLLPTAIFPSTNPNNIALFKSTLNGNVYHLVNCEALIIADFEWKKNEMGKIPSNAVFCGIVNDDFQYVGRALYNESIIIGRVSKESGCLYILYGNEEILIQSFEVLVDKNNDITLTDEVPSQPTFDVPTKPSRNINENQCTICFESPVVGIFKECMHACLCADCIDIVNRKKEYNGKVMCPICRKLNYKAEKFFMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -