Pvan005509.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- -
- Assembly
- GCA_018290095.1
- Location
- CM031381.1:26431694-26434558[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-11 6.9e-08 32.2 9.6 1 45 35 83 35 85 0.90 2 2 8.8e-13 1.4e-09 37.6 15.3 3 44 118 159 116 162 0.93
Sequence Information
- Coding Sequence
- ATGGAAACTAATTACAATTACGCCTCATCAAGTTCCTCacaagaaatcaaaaaagaggacattaaaatattgatcaatgcacaaaaaaagagagaaacacGTAAAGAACAAAAATGCGTCTTCTGTCGTAATCATAACataattatttctaaaaaaggCCATAAAAACCATTGCAAGTACAACAATTCTTTTCATATCGATACATGCAAACCCTGTAGCCAAACACGACAACGTCAAAAGTTTACCGCagttgagaagaaaaataattatcagcatcaaaaaattcaatcaaaaatgagTTCGATTGAAGGTTATACTGATACACATTACATAAATAGAACACGAGCAGAGcagaaatgcaaaaaatgtcttaatcataaattaaacATAACTATGAAAAATCATCTGAAAGATTGcagatataaaaattgtaaatgcgAAAGATGTCAGGATACAGATGAACGTCGAAAACATGTAAAAGATGAAGCAAAAACACATCgtgaaaaaatgaagataaaatatGAGCAAAACGATAGTCCAAGATCATTAGATTCTGAATACTCTAATTATTCACCTCAATTCGATCGCTCTGTTagttttgaagatttttgcCATAcagttaattttcaaaaaagcatTCACTCAAATATtccaattgaaataaaaaatcatcaattctTTTATCAACGTCCCATGTCACCAAgcgaaatggaattttttaaccAATGCTACAATTTTCCAATTATCACAAAACCATACTCTCAAGAATATTATTCACTAGACACCATGTATCCATCAACTCTCAGAGAATTGGAACTTCAGAACGATACATTTAACGATTCATTTGACAAGAACGTTGACGAAAATAtgttaaagttttttgaagataaattttcattaatatataTTGATTTAAAGGATTTAAGTGAAGAATTGATTGATatttaa
- Protein Sequence
- METNYNYASSSSSQEIKKEDIKILINAQKKRETRKEQKCVFCRNHNIIISKKGHKNHCKYNNSFHIDTCKPCSQTRQRQKFTAVEKKNNYQHQKIQSKMSSIEGYTDTHYINRTRAEQKCKKCLNHKLNITMKNHLKDCRYKNCKCERCQDTDERRKHVKDEAKTHREKMKIKYEQNDSPRSLDSEYSNYSPQFDRSVSFEDFCHTVNFQKSIHSNIPIEIKNHQFFYQRPMSPSEMEFFNQCYNFPIITKPYSQEYYSLDTMYPSTLRELELQNDTFNDSFDKNVDENMLKFFEDKFSLIYIDLKDLSEELIDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -