Pvan008038.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- dsx
- Assembly
- GCA_018290095.1
- Location
- CM031381.1:5537322-5549108[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-22 3.6e-19 68.3 13.2 2 47 18 63 17 63 0.97 2 4 5 8.1e+03 -3.2 0.0 16 23 74 81 71 86 0.60 3 4 2.5 4.1e+03 -2.3 0.5 11 26 106 121 104 124 0.73 4 4 4.9 7.9e+03 -3.2 0.2 33 36 162 165 153 168 0.51
Sequence Information
- Coding Sequence
- ATGAGTGAGCAAAAGAATAAAtcgaaaaattctttgaatataAACAGAGCGACACCATTCTGTGCTCGATGTCGAAATCATGGACTCAAATTGAAACTTAAAACTCATAAACGATATTGCCGTTTCCGTAATTGTTCTTGTGAAAAATGCAACTTGACAATGCAACGACAGAAAATTATGGCACATCAAACAGCAATGAGAAGGGCAATGTTACAGGATGAATTAAGAAACCACAattacaatcaaaattttagtaaTAGCAATTTCAACGATTCTTTAGTCACTTCTTCATCAACAACTTcttataatcatcatcattcacaGTTAATAAATCCTCAAGGACATCAGAACAGTTCGAattaCAATTGCGATGATATTATGGAGTCAGTTATTTCTGTGGAACAGCACTTAGGATATGACAGTTATGAAAGCAAAGCATTTATCTATGCAATTCTTAAATGTGCTAAAAACAATGTCTTTGAAACATGTCAAATGATCATGAATGGAAAGTTTGCAACGAATGaatttctgaaaaatcaaaacattttaaaaattgaagaaactgAAGGCAGTGAATCGAATAGAATTGTAAATTATTCATCACACATGAATGACCATCATCACAACAATCTTACAACTCAAACTTTCAATGACAGCATCTACAATTGGTAA
- Protein Sequence
- MSEQKNKSKNSLNINRATPFCARCRNHGLKLKLKTHKRYCRFRNCSCEKCNLTMQRQKIMAHQTAMRRAMLQDELRNHNYNQNFSNSNFNDSLVTSSSTTSYNHHHSQLINPQGHQNSSNYNCDDIMESVISVEQHLGYDSYESKAFIYAILKCAKNNVFETCQMIMNGKFATNEFLKNQNILKIEETEGSESNRIVNYSSHMNDHHHNNLTTQTFNDSIYNW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -