Pvan008779.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- DMRTA1_1
- Assembly
- GCA_018290095.1
- Location
- CM031381.1:7184082-7187128[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-19 4.9e-16 58.3 10.1 2 46 9 53 8 54 0.94 2 2 1.3e-19 2.1e-16 59.5 15.6 1 47 100 146 100 146 0.98
Sequence Information
- Coding Sequence
- atgtctttacaCCGTATCCGTAAAGAACAAGTTTGCGCTCGTTGTCGTAATCATGGAAAActtagtattttaaaaaatcataagaaattttgtccaTTTCGCGATTGTCTATGTGAAAAATGTACAGAAACTCGTGATCGTCAACAATTTATTGCAAGAGAAATTCGTTTTCATcgtaaaacaacaaaaaatattgatgacgatagtaaaaatattgctagaaatttgaaaagacttacaaatttaaaaataaatgatgatgaaagtgtGACATTAAATTCATTATGTGAAGTTAGACGACATCAAATGTGTGCACGTTGTAGAAATCATGATAAGCACAACTTAATTAAAggccataaaaataattgtgaatTTGCAGAATGcaaatgtgaaaaatgtttaattactGAAGAACGTAGGAAAATTATGGcaaaacaaattaaagaaaatcgtttaaataaaatcacatcagatgatgatgatggctaTAGTACAAATATAAGTCCTGAAACAGAAactgaaagttttaaatatcCAATTATTGAAGAACATCAGACTCCACCACAACTACATGAAATTCaagatttaaatcaaattgtgacagatgaaaaagaaattttttatattgttcaATCACTTTATGAAAAATGCTTCATTCATGGAGATTCAAAGAGTCGACTTGAAGTATTGTATGCATTTGTCATGTTGTCTCAAGgTGCACAAATAGCAGAAGAACAATTAGAAAAGCATCTCAAAATggcaaaatttcatcaatatctTTTATCTCAATCGTCACAATCATGGTCAACCacagaaataaatgaaattcatcaacagcaacaacagcgTCAAGTACGACTGAATTTAAAAGTCATgcatggaaatttttga
- Protein Sequence
- MSLHRIRKEQVCARCRNHGKLSILKNHKKFCPFRDCLCEKCTETRDRQQFIAREIRFHRKTTKNIDDDSKNIARNLKRLTNLKINDDESVTLNSLCEVRRHQMCARCRNHDKHNLIKGHKNNCEFAECKCEKCLITEERRKIMAKQIKENRLNKITSDDDDGYSTNISPETETESFKYPIIEEHQTPPQLHEIQDLNQIVTDEKEIFYIVQSLYEKCFIHGDSKSRLEVLYAFVMLSQGAQIAEEQLEKHLKMAKFHQYLLSQSSQSWSTTEINEIHQQQQQRQVRLNLKVMHGNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -