Pvan008128.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018290095.1
- Location
- CM031381.1:28265913-28278132[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-16 3e-13 49.2 0.0 1 42 322 364 322 367 0.94 2 2 1.2e-18 1.4e-15 56.7 0.0 1 43 715 758 715 760 0.95
Sequence Information
- Coding Sequence
- ATGGATACAAAAGACGAACgATTAGAAAGAGTAGCTGAGGAATTGATGGGACGCAGAAAATGGAAACAATATCAAGAGTCTTTAACACAAACAAACACGAATGATTTGATTGAGAAGCAATCACCTTCAATTgaagaagaaaccaGTAATaacaagcagcagcagcagcaacaaaacagtgaaaataataaaactggAATTAAAGCGGAAACACTAGATATAAAGgaagaaaacaaattgatgACTACAGAAGACGTTAGCGAAAAATTAGAATCAGATTATTGtaaaacaacaataacagACACATCAAATAGAGAGATAGAAGCGACTGAATACAAGAACTCGATCAAAATCGAGACAACGCGACCTGAGCCGGTCGATTGGAAACCCGACGACAATTGTAACTTTTGTGTCAACGGAAAACTGTTAAAAGTGAACGAAATAGGTGAATTAGTCGTTGAGACGGGTCCGGTGCATCCGGAATCTGAGCTCAACAAGCATATTGTTGAATCAGACGACTCGAGTTCAGGTTCCGATAcagtgcaaaaaaataataatcaaccacaacttcaatttcaatcatcGCTGATACAGAAAAATTTAGAGACACTGTTAAAGACAGTTGGTCTTAATCCAAATATGACGTCATTAGAATCAATGGCTGCACAACTTGCAGCATTTCAACGTCTACAAACACcagaattaaatcaattaaatccATTTTATCCGAATCTATTTTATCcatttcaacaacaacaacaaatatcACCAACTACAACGCCTGATCGTTCAGCAAGTCCTTCAGTTATTATACCGTCAAATGATGAATCACCGACTGGTCAAGTGACTGGTGAACAACCTTTAGATCTCAGTGCAAAACCAAGTGGATCTACACAACTTgagtcaaaaaatattttcaaAGCAAAACCACGAATATCGACTGTGCCTGGTCGACGATCCTATACAGAAGAAGAATTGAATAATGCACTGCAAGACATTTTAAGTGGAAAATTGGGAACAAGACGAGCTGCTGTTCTTTATGGTATTCCGAGATCTACATTACGTAATAAAGTTTATAAACTGGCCACTGAACAAAGACGTGAATTGTTGGCCAATCATCCACCAATAGCGATTCTTGaggatgaagatgaaaaagattCGGGTGGTGAGGAGGAAAAAGATCAACCAAAAGTGGGTGATTCAAATGAGCagttacaaaattatttgaaattattagcTAAAAGTTCAGAGAACTTGAAACAAGATCAACATCAAGAGTCAAAAGATAATCGAGGTCCGAGTTCATGGCCCATTGATCCAACCGCGTGGATACAAAGTCTTATTCTTGCCAATGGATTTCAGGGAATGGGCggattttcatcacttttagGCAATCCATCGTCTACGTCACCTTCGTCATCGCTCTCTCCCAAGCAAGAAGAGCTACCCGAGTTTCTGAGAAAATTGTTGACACAGCCGCAAGATAACAAGTCTGAGTTTaataataaacttaaaaaCGACATTGACccactgatgatgatgaatttactacaacaaaataaaaaaacaccCGAGCTTGATATGAATGAAGGTAGCGAAGATTCTAATGCGATTCTTAAAATTCCGTCCATTCCGAAAGCGATATTTGGTCAGCAGCCAGCACTTGTAGGAACAGCGACACACAGCAAGAATGGTGACATTGTTCATCATTCGGGTTCAAATACTCCTTCCACGTCACCACAAATGGCCATTAGTCCACGTTTACAAGTTGGTTCAGCACTTGCAAATCATCTAACTATGCGATCACCGTCATCATTAATGCGACAAAGAAGTGAATCAGAATCACCAGAACCACGAGCGAAATTTAATCTTCAAGATGTCATTCGTCAAAGTATTagtaaaaactttcaaacaaatattttgGACGACCCAAAACATTCCACGCCACTTACAATTGATCCAATGAATGATTATCAAAAACGACCGACAATTTCGGTTATTAAAAGTCTTGGTGGCACTGATCTTTCACGTTTTGGAACAAATCCCAATATCACACAATTACAGCAACAACAATTGTCACCAAATAATACTGGAACTGGTGGAAAAGGTACAAGGCCGAAACGTGGAAAATATCGTAATTATGATCGCGATAGTCTAGTAGAAGCTGTAAAAGCAGTACAACGTGGTGAAATGTCAGTTCATAGAGCTGGAAGTTATTATGGTGTTCCACATTCCACACTTGAATATAAAGTAAAAGAACGACATTTGATGCGTCCAAGAAAACGTGAACCTAAGCCACAACCACTGGATGGAACTTcgacatcatcatcagcagcCTCAACTGCAGCTTCAGTGAAACGACAAGAAGTTCCTTCAGtagataaaaataaaccaTTATCATTGACAAAATCACCCATGAAATCACCATTTGCATCTCCAAATGGACTTAAAATCCCACCATTTATCGATCACGCACAGATGGCGGCTCAATTGCAATTACAGTCACAACTTCTTTGGCCTCATCCGAGTTCTTTTCCTGGTCTTAGTGCACTCGACTTTGCACGATCCTCCTCGCAAAATAACACACCCTCCTTCTCGCCGAATGCAgctgaaaatttctttgctcAGCAAATGCTACAAAAATTCCAAGAAGACCAAcaaaatcaacaacagcaacagttTAAGCCACCAGTCAATGGTGGTAGCAATAATGCAGGACAAAATAATAACATTAAACGAGATATTGAGAGCTTCTACGATCCAGTAAGTACAAATGGCTCATTTCTTGATGGCATTATACGATCATCGCTAGATAAAAAATCAGGCGAAATAAATCATGGTGCATTATTTGAGCaattgttgaagaaaaattctttaccaGCTTCTTCATCTATTCCATCTGATAGTAGTGAGGATTtcaaaacaaacaataaaagacCAGGCAGTCCAATGAATTATTCtcatattattaaaaaggAGCGAACTAGTCCGCCTCCAAATCACAATAATGATTTAGGTTTTGCACTACATGATGAGCAGCAGCGTCAAACTTCTGCTTTAGCAAAAAGTTTAGcgataaaagaagaagtaaatgGCTCATTACACAATAATGATGACGTTAATTCATAA
- Protein Sequence
- MDTKDERLERVAEELMGRRKWKQYQESLTQTNTNDLIEKQSPSIEEETSNNKQQQQQQNSENNKTGIKAETLDIKEENKLMTTEDVSEKLESDYCKTTITDTSNREIEATEYKNSIKIETTRPEPVDWKPDDNCNFCVNGKLLKVNEIGELVVETGPVHPESELNKHIVESDDSSSGSDTVQKNNNQPQLQFQSSLIQKNLETLLKTVGLNPNMTSLESMAAQLAAFQRLQTPELNQLNPFYPNLFYPFQQQQQISPTTTPDRSASPSVIIPSNDESPTGQVTGEQPLDLSAKPSGSTQLESKNIFKAKPRISTVPGRRSYTEEELNNALQDILSGKLGTRRAAVLYGIPRSTLRNKVYKLATEQRRELLANHPPIAILEDEDEKDSGGEEEKDQPKVGDSNEQLQNYLKLLAKSSENLKQDQHQESKDNRGPSSWPIDPTAWIQSLILANGFQGMGGFSSLLGNPSSTSPSSSLSPKQEELPEFLRKLLTQPQDNKSEFNNKLKNDIDPLMMMNLLQQNKKTPELDMNEGSEDSNAILKIPSIPKAIFGQQPALVGTATHSKNGDIVHHSGSNTPSTSPQMAISPRLQVGSALANHLTMRSPSSLMRQRSESESPEPRAKFNLQDVIRQSISKNFQTNILDDPKHSTPLTIDPMNDYQKRPTISVIKSLGGTDLSRFGTNPNITQLQQQQLSPNNTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGTSTSSSAASTAASVKRQEVPSVDKNKPLSLTKSPMKSPFASPNGLKIPPFIDHAQMAAQLQLQSQLLWPHPSSFPGLSALDFARSSSQNNTPSFSPNAAENFFAQQMLQKFQEDQQNQQQQQFKPPVNGGSNNAGQNNNIKRDIESFYDPVSTNGSFLDGIIRSSLDKKSGEINHGALFEQLLKKNSLPASSSIPSDSSEDFKTNNKRPGSPMNYSHIIKKERTSPPPNHNNDLGFALHDEQQRQTSALAKSLAIKEEVNGSLHNNDDVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01249027;
- 90% Identity
- iTF_01249027;
- 80% Identity
- -