Ppem001576.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- Mblk-1
- Assembly
- GCA_014622435.1
- Location
- JACWBX010003564.1:1-13632[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-16 2.6e-13 49.4 0.0 1 42 351 393 351 396 0.94 2 2 7.9e-19 1.2e-15 56.8 0.0 1 43 743 786 743 788 0.95
Sequence Information
- Coding Sequence
- ATGGCGGATTGTTCATATCTTCGTTGTGTACAAGAGCGAAGATTTATAAAACGCGAATTACAAAAGTGGTACAAGAATATGGTCTACATTGTTGGATTAGAAAGAGTAGCTGAGGAATTGATGGGACGCAGAAAATGGAAACAGTATCAAGAGTCTTTAACACAAGCACACACGAATGATTTGATTGAGAAGCAATCACCTTCAATTGAAAAAGAAGAAGAAACTAGTAATAACAAGCAGCAGCAGCAGCAACAAAACAGTGAAAATAATAAAACTGGAATTAAAGCGGAAACACTAGATATAAAGGAAGAAAACAAATTGATGACTACAGAAGATGTTAGCGAAAAATTAGAATCAGATTATTGTAAGACAACAACAACAACAGACACATCAAATAGAGAAATAGAAGCGACTGAATACAAGAACTCGATCGTAAGCGAGATAAAGCGACCTGAGCCGGTCGATTGGAAACCCAACGACAAGTGTAACTTTTGTGTCAACGGAAAGTTGTTAAAAGTGAACGAAATAGGTGAATTAGTTATTGAGACAGGTCCGGTGCATCCGGAATCTGAACTCATCAAGCATATTGTTGAATCGGACGATTCGAGTTCAGGTTCTGATACAGTGCAGAAAAATAACAATCAGCCACAGTTACAATATCCATCATCGCTGATACAGAAAAATTTAGAGACGATACTAAAGACAGTTGGTCTCAATTCAAATATGACGTCGTTAGACTCAATGGCTGCACAACTTGCAGTCTTTCAGCGTCTACAAAATCCGGAATTAAATCAATTGAATCCATTCTATCAAAATTTATTTTATCCATTTCAACAACAACAACAACAAATATCACCAACTACAACTCCTGATCGTTCAGCGAGTCCTTTAGTGACTGCTCCATCAAATGATGAATCACCATCTGGTCAAGTGACTGGTGAGCAACCTTTGGATCTCAGTGCAAAGCCCAGTGGATCTACACAAATTGAGTCAAAAACAATTTTCAAAGCTAAGCCACGAATATCGACTGTGCCTGGACGTCGATCTTACACAGAAGAGGAACTGAACAATGCATTACAAGACATTCTGAGTGGAAAACTAGGAACAAGACGAGCTGCTGTTCTTTATGGAATTCCACGATCTACATTACGCAATAAAGTCTATAAATTGGCTACTGAACAGAGACGTGAGTTATTGGCTAATCATCCACCGATAGCAATTCTCGAGGATGAAGATGAGAAAGATTCAGGTGGCGAGGAAGAAAAAGAACAACCGAAAGCGATTGTTTCAAATGAGCAATTACAAAATTATTTGAAATTATTAGCAAAGAGTTCAGAGAGCTTAAAACAAGATCAACATCAGGAGCCAAAAGATAAAACACCTAGTTCATGGCCTATTGATCCTACTGCGTGGATACAGAATCTTATTCTTGCAAATGGTTTTCAGGGAATGGGTGGATTTTCATCGCTATTAGGCAATCCACCGTCCACTTCGCCTTCATCATCGCTCTCTCCTAAGCAAGAGGAGTTGCCTGAGTTTTTGAGAAAATTATTGACACAGCCACAAGACATCAAACCTGACTTTAATAATAAACTCAAAAACGACATTGACCCAGTAATGATGATGAACCTACTGCAGCAAAATAAGAAAACACCCGAGCTCGATTTAAATGAAGGTAGCGACGACTCAAACACGATCTTGAAAATTCCGTCCATTCCGAAAGCGATGTTTGGTCAGCAACCACCACTAGTGGCAACAGTGACTAATAGCAAAAATGGTGATATTATGCATAATTCGGGCTCAAACACTCCTTCCACTTCGCCACAAATGGCTGTGAGTCCACGTTTGCAAGTTAGTTCGGCACTTGCAAACCATCTAACCATGCGATCACCATCATCGCTGATACGACAGAGAAGCGAATCAGAATCGCCAGAACCGCGAGCGAAATTCAATGTACAAGAAGTCATTCGTCAGTGTATAAGCAAAAACTTTCAATCTAATCCTTTTGACGATCAAAAACATTCCACGCCATTAACAATTGATCCAATGAATGACTATCAGAAACGACCCACCATTTCAGTCATTAAAAATCTTGGTGGCACTGATCTTTCACGCTTTGGAACAAATCCCAACATCACACAATTGCAGCAGCAACAATTGTCACCAAACAACACTGGTACAGGAGGAAAAGGTACGAGACCAAAGCGTGGAAAATATCGTAATTATGATCGTGATAGCCTAGTAGAAGCTGTTAAAGCTGTACAACGAGGTGAAATGTCAGTACACCGAGCTGGAAGTTATTATGGAGTTCCTCATTCTACACTCGAATATAAGGTGAAGGAACGACATTTGATGCGACCAAGAAAACGTGAGCCTAAGCCACAGCCACTTGATGGGACTTCAACATCATCCTCAGCAGTCTCAACTGCAGCAACAGTGAAACGAGAAATTCCTTCTGTGGATAAAAATAAACCATTGTCATTAGCAAAGTCTCCAATGAAATCGCCATTCGCTTCGCCCAATGGACTTAAAATCCCACCTTTTATTGATCACGCACAGATGGCGGCACAATTACAATTGCAATCACAACTTCTTTGGCCTCATCCGAGCTCGTTTCCTGGCCTTAGTGCACTGGACTTTGCTCGATCCTCCTCGCAAAACAATACACCTTCGTTCTCACCGAATGCAGCTGAAAACTTTTTTGCTCAACAAATGCTGCAAAAGTTCCAAGAAGAACAGCAACAACAACAACAACAACAGCATCTGCAATTCAAACCACCAGTCAATGGTGGTAGCAGTAATGTAGG
- Protein Sequence
- MADCSYLRCVQERRFIKRELQKWYKNMVYIVGLERVAEELMGRRKWKQYQESLTQAHTNDLIEKQSPSIEKEEETSNNKQQQQQQNSENNKTGIKAETLDIKEENKLMTTEDVSEKLESDYCKTTTTTDTSNREIEATEYKNSIVSEIKRPEPVDWKPNDKCNFCVNGKLLKVNEIGELVIETGPVHPESELIKHIVESDDSSSGSDTVQKNNNQPQLQYPSSLIQKNLETILKTVGLNSNMTSLDSMAAQLAVFQRLQNPELNQLNPFYQNLFYPFQQQQQQISPTTTPDRSASPLVTAPSNDESPSGQVTGEQPLDLSAKPSGSTQIESKTIFKAKPRISTVPGRRSYTEEELNNALQDILSGKLGTRRAAVLYGIPRSTLRNKVYKLATEQRRELLANHPPIAILEDEDEKDSGGEEEKEQPKAIVSNEQLQNYLKLLAKSSESLKQDQHQEPKDKTPSSWPIDPTAWIQNLILANGFQGMGGFSSLLGNPPSTSPSSSLSPKQEELPEFLRKLLTQPQDIKPDFNNKLKNDIDPVMMMNLLQQNKKTPELDLNEGSDDSNTILKIPSIPKAMFGQQPPLVATVTNSKNGDIMHNSGSNTPSTSPQMAVSPRLQVSSALANHLTMRSPSSLIRQRSESESPEPRAKFNVQEVIRQCISKNFQSNPFDDQKHSTPLTIDPMNDYQKRPTISVIKNLGGTDLSRFGTNPNITQLQQQQLSPNNTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGTSTSSSAVSTAATVKREIPSVDKNKPLSLAKSPMKSPFASPNGLKIPPFIDHAQMAAQLQLQSQLLWPHPSSFPGLSALDFARSSSQNNTPSFSPNAAENFFAQQMLQKFQEEQQQQQQQQHLQFKPPVNGGSSNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250006;
- 90% Identity
- iTF_01250006;
- 80% Identity
- -