Ppem016694.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- stc
- Assembly
- GCA_014622435.1
- Location
- JACWBX010003789.1:37305-40250[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.6 1.4e+04 -3.8 1.1 15 18 289 292 288 293 0.81 2 13 0.3 2.6e+03 -1.5 0.3 4 10 322 328 321 328 0.91 3 13 0.02 1.7e+02 2.3 10.5 4 14 336 346 334 351 0.88 4 13 4.7e-07 0.0041 17.1 11.0 1 19 387 405 387 405 0.97 5 13 2.6e-09 2.2e-05 24.3 15.8 1 19 445 463 445 463 0.97 6 13 0.00036 3.1 7.9 10.2 4 18 511 525 504 526 0.87 7 13 2 1.7e+04 -4.4 2.0 5 10 553 558 553 558 0.91 8 13 0.037 3.2e+02 1.4 7.9 1 11 564 574 564 575 0.91 9 13 0.032 2.8e+02 1.6 1.9 4 10 579 585 578 585 0.97 10 13 4.4e-06 0.038 14.0 12.7 3 18 593 608 591 609 0.92 11 13 2 1.7e+04 -7.1 11.4 10 18 656 665 645 666 0.76 12 13 6.4e-09 5.5e-05 23.0 7.6 1 16 702 717 702 724 0.93 13 13 1.9e-05 0.17 11.9 9.0 4 18 736 753 734 754 0.88
Sequence Information
- Coding Sequence
- ATGTCACCTGTATCAGGCGGAGAAGGAGCAACACAAATGTCAAGTTTAAATGCCAACGCATCAGAATTTATTCCCATAATGAATGAAGAATCGACTCAAGTAGCAACAACTTCAAGTGGTGCTGTACCAAAAAAGTTTTTTAGAAATAATAATTATCGACGTGAAAAATACTACAACAATAACCAAAAATGGAGATCTAATGGTGGCCAACGAAGAGAGAATTTAGCTGAAAGAAATAATAGAAATGAAGATAGTAATTTTAACACATCTGAAAATGATAATCAGAACATAAAGTTCTTTGCAAATAATAAATCGTCGAGGCAAAATGAAAGAATGCATGATCAAAATCATTTTGAAGAATCATCTCAAATTAGTAAACAGCAGAACTCTCAGTTGAACAGAAATACACATATTTCAAACAATAACAATAGATCCAAGAATATGAATCGAAATCGAGAGAACGAAATTTTTACTGAAAGACAATATTATAATCGTCGAAACAACAATTATGGTCGAAATTATAATGGAATTCGATCAAATAACAGCCACAAAAACGAAAATCAAGAGAAAGCTACAGAGCAAAATCAACAAGAAGAAGTCATAGAAAAATTAGCACCAAGTAATCGTCCAAAGAAACGTGATAATTTCAATCGTAAAAAGGATACATCAAAAGTGTCAAGCGCTTCTCAACGTGATCGTTTGATAAAAGAAATTGAATCTAATACACTCGAATGCATGATTTGTTGTGAAAAGATTAAGTCTTATCAACCAATTTGGAGTTGCTCTAACTGCTATCACATTCTTCACTTAAATTGTATTAAAACATGGATGAAAAATTCAAAGAATGAGGAGGGTGAATGGCGTTGTCCAGCATGTAATCAAATGACAAAAATTAAGCCTGGCGACTATTTATGTTTTTGTGGAAAAGTAAAAAATCCAGCAGTCAATCGTAATGATTTAGCGCATTCATGTGGTGAAATGTGCATGAATCAATCACTTTGTCCTCATCCTTGTCAGTTAAAGTGTCATCCTGGTCCGCATGAGATTTGTTATGCATCAGTTCTCAAAACATGTGGCTGTGGAAAAACTTCGAAGACTTATCAATGTTCAATGAAGGCAACTTTTGAGTGCGAATTAGTTTGTAATAAAGAACTTAATTGTTCATCTCACAAGTGCCCTAAAATTTGTCATCAAGGTGCTTGCGATGATTGCTCTGAACTAATTGAATGTTTCTGCTTTTGTGGTGCTGAAAACAAAACTCTTCCTTGTACAGTTGATAATTTAGATAAAATAAAATATTCGTGTGAAAAAGAATGTGGAAAATTGTTGAGTTGTGGAAATCATACATGCAAACAGAAATGTCATGAAGGTGATTGTGGGAAATGCAAACTGCTTCCAGAATTTGTATTATGTTGTCCATGCACTAGAACACCTGTTAAGGAAGGAACAAGAAAAAGCTGTCTCGATCCAATACCAGTTTGTGAAAATATTTGCAAGAAAGCACTTCGATGTGGCAAACTTTCATCACCTCATCTATGTGAAGCAAAATGCCATTTAAACGAATGTCCACCTTGCAATCAAACTTCAAATGTCAAATGCCGGTGTGGTCGAAAGGAAGAAAAAATTCCATGTAAAGAATTGACTAATACTGATTTACGATGCAAAAAGAAATGCAACAAATTCAAGTCATGTGGGCGTCACAAATGTAATATTGAATGTTGCATTGATCCTTTCCACAAATGTACTCAAACATGCAACAGAATGTTAAATTGTAAGCTTCACAAATGTCAAAGAATGTGTCACATTGGTAATTGTGCGCCATGTCATCGAGTCAGTTTTGATGAGTTACGATGTGAATGTGGATTTACAGTAGTTTATCCTCCTGTTCCATGTAATACTAAAATCAGTGACTGTCCAAAAAAATGTACGCGCACACACAAGTGTAATCATCAAGTAGTGCACAATTGTCATTCTGAGGCTGAATGTCCTCCATGTGTATTTTTGACAAGTAAATTTTGTTATGGAAAGCATGAAGAAAGAAAAACTATTCCTTGTAATCAAGAATCTTTTTGTTGTGGAATGCCTTGTGGAAAATTACTCAAATGTGGTCGACATACTTGCATTAAAACTTGTCATCAAGGAGATTGCGAGAAAAAGGATGAAATTTGCAAGCAAAAGTGTACAGTTAAACGTCTTGAATGTGATCACAATTGTAATGCACAATGTCATGATGGAAATTGTCCTGACAATATATCTTGTCGTGAAAAAGTCCAAGTTTCGTGCACTTGTGGAAATCTCAAAGAATTCAAGACTTGTGAGCAAGTTGAATATGAAAATAAAAAGCTTCAACGTATTCATATTACCATGCAAATGCAAGAAATGCAACAAAGTGATGGGGTAACTGATCTTAAAACAATGCTTGGTGATTTCAAAAAGACTACCAAAATTCTTGAGTGTAATGATGAATGTAAAACACTAGAACGAAATCGTCGTCTTGACATTGCTTTCAAAGTTCAAAATCCAACTCTTGCTACTACACCTCGATTTACTCCCACCTATAGTGAACACGTTCGAAATTATTATAAGAAAGATCCAGCATTCGTCAATATGGTGCATGATAAATTGACTGAATTAGTAAAATTAGCTAAAGAAAGTAAAGCTGCTTATCGCTGTCATTCATTTCCTTCAATGAATCGTGATAAACGTCATGTGATTCACGATATGGCAGAACTATTTGGTGTTGAGACAAAAGCTTATGATGCTGAGCCTAATCGAAATATTGTTGCAACTGCTACACGAGAATATTGTTGGCTTCCATCAATGAGCATGGCTGAAATTGCTAGTCGTGAAAATGGAGCTCGTCGACCACCAACTAATCAAACATTTAAGTGA
- Protein Sequence
- MSPVSGGEGATQMSSLNANASEFIPIMNEESTQVATTSSGAVPKKFFRNNNYRREKYYNNNQKWRSNGGQRRENLAERNNRNEDSNFNTSENDNQNIKFFANNKSSRQNERMHDQNHFEESSQISKQQNSQLNRNTHISNNNNRSKNMNRNRENEIFTERQYYNRRNNNYGRNYNGIRSNNSHKNENQEKATEQNQQEEVIEKLAPSNRPKKRDNFNRKKDTSKVSSASQRDRLIKEIESNTLECMICCEKIKSYQPIWSCSNCYHILHLNCIKTWMKNSKNEEGEWRCPACNQMTKIKPGDYLCFCGKVKNPAVNRNDLAHSCGEMCMNQSLCPHPCQLKCHPGPHEICYASVLKTCGCGKTSKTYQCSMKATFECELVCNKELNCSSHKCPKICHQGACDDCSELIECFCFCGAENKTLPCTVDNLDKIKYSCEKECGKLLSCGNHTCKQKCHEGDCGKCKLLPEFVLCCPCTRTPVKEGTRKSCLDPIPVCENICKKALRCGKLSSPHLCEAKCHLNECPPCNQTSNVKCRCGRKEEKIPCKELTNTDLRCKKKCNKFKSCGRHKCNIECCIDPFHKCTQTCNRMLNCKLHKCQRMCHIGNCAPCHRVSFDELRCECGFTVVYPPVPCNTKISDCPKKCTRTHKCNHQVVHNCHSEAECPPCVFLTSKFCYGKHEERKTIPCNQESFCCGMPCGKLLKCGRHTCIKTCHQGDCEKKDEICKQKCTVKRLECDHNCNAQCHDGNCPDNISCREKVQVSCTCGNLKEFKTCEQVEYENKKLQRIHITMQMQEMQQSDGVTDLKTMLGDFKKTTKILECNDECKTLERNRRLDIAFKVQNPTLATTPRFTPTYSEHVRNYYKKDPAFVNMVHDKLTELVKLAKESKAAYRCHSFPSMNRDKRHVIHDMAELFGVETKAYDAEPNRNIVATATREYCWLPSMSMAEIASRENGARRPPTNQTFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250768;
- 90% Identity
- -
- 80% Identity
- -