Ppem006942.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- nfxl1
- Assembly
- GCA_014622435.1
- Location
- JACWBX010004327.1:61573-64186[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.67 5.8e+03 -2.6 0.3 14 18 100 104 100 105 0.76 2 16 0.63 5.4e+03 -2.5 1.5 14 19 153 158 153 158 0.86 3 16 0.73 6.3e+03 -2.7 0.3 4 10 189 195 189 195 0.87 4 16 3.4e-06 0.03 14.3 14.0 1 19 203 220 203 220 0.95 5 16 1.1 9.6e+03 -3.3 1.9 5 10 245 250 245 250 0.94 6 16 2.6e-05 0.22 11.5 13.4 1 19 256 273 256 273 0.97 7 16 7.7e-08 0.00067 19.6 14.9 1 19 308 326 308 326 0.99 8 16 5.3e-07 0.0046 16.9 11.5 1 18 363 379 363 380 0.98 9 16 2 1.7e+04 -5.6 13.5 3 18 416 430 414 431 0.89 10 16 9.3e-11 8e-07 28.9 11.4 1 18 440 457 440 458 0.97 11 16 0.14 1.2e+03 -0.4 9.2 10 19 506 515 504 515 0.92 12 16 0.73 6.3e+03 -2.7 5.0 3 12 525 534 524 534 0.88 13 16 1.8 1.5e+04 -3.9 0.2 13 16 566 569 566 570 0.71 14 16 9.7e-06 0.085 12.9 8.3 1 11 605 615 605 616 0.96 15 16 0.16 1.4e+03 -0.6 11.0 1 18 644 662 644 663 0.73 16 16 0.0013 11 6.1 10.4 1 16 714 728 714 734 0.86
Sequence Information
- Coding Sequence
- ATGCCTTCGACCAAAGAAAAGACTTCAAAAAACACCAACAAGAAAAATAACAACGCCAAATTTGAAGAAATTCAAAGAAAAAATCAAGAAATTTTAAAAGAACGATTTGGCAACGAAATTTCAGAAAGTTCCGATGACGATGATGGAAACAAAGTTGAAAAATCAAAAATTGACAGTCTCTTTAAGAATTATCAAGGTAGTGAGATTGACGTGGCGCGCATTCAGCAATACTTTGATGGTGAAAATCTCGATTGTCTTATTTGCATTCGTTCAGTGAAAGTAAACGATAAAATATGGAATTGTGGGACTTGTTATCTTTCTTATCATCTTCAATGCATTCAAAAGTGGGCAAATGATTCAATGAATCTGAAACGATTATGGCATGATAATCAGCCAGTTGGATATTATGATAATCAAGGAACATATATTAAAAAGAAAGAACTTAAGCTATTTTGGGACTGTCCTAATTGCAGGTGTGAATACAAAGAAGATGAAATTCCACGACATTATTTCTGTTATTGTCTCAAAGAAATTGATCCACCAAATCAAGAATGGCTCATTCCTCATAGTTGTGGAATGGTGTGTCAAAAGCCATTGCCCGGTCTTTGCAGTCACAAATGTACGATTCTCTGTCATCCAGGAAAGTGTCCAAATTGTCCACAAACAATTAAAGTTAGTTGCAAATGCAAGAAATCACCATCAAAATTAATAAGATGTAGTCAACAATTCTGGACTTGCTCACAAAAGTGTGGAAAGAAACTCGCTTGTGGCATTCACAACTGTGAAGGCATCTGTCATGATGAATGTCCACCTTGCAAAGAAAAAAGTGTTAAAAAATGTTTTTGTGGTCAAAAGTCAAAGGAGATTAAATGTGAACAAGAAGCATGGAGTTGTGATAAAATTTGCAAAAAACCACTCTCTTGTGGCAATCATTTTTGCGAGAAAAAATGTCATGGAGGTGATTGTGGTCAATGTCCTTTCGGATTTGAAAGAAGTTGTTTTTGTGGCAAGCAAACTTTTGAAGTTTTACGCTGTGATGAACAACAACTTGATTCTTGCGGAGATACTTGCCTTAAGCAATTGCCTTGTGGTCATCAATGCTTTTCGCGTTGTCATAAAGGAGAATGTGATCCATGTATGGAGCATGTTGAGAAAAAATGCAGATGTGGTGCAATATCGAAAGTTTTTACATGCTCTAAAGAATTGCTTTGTGAAACGAAATGTAATAGACAGAAAGCATGTAAGAAGCATTCCTGCAAAGCAAGATGCTGTGTTGATTGCGCTCCTTGTAATATGATATGTGGAAAGATGTTGACTTGTGGCAAACATAAATGTGAAGCTCTTTGTCATTCTGGAAATTGTTATCCATGTAATGAAAAACAAAAAATTTCATGCCGTTGTGGATCAACTTCAATTTTTGTTCGTTGTGGAAAAGCTAGCAAACAAAAAGCACCTAAATGTAAGGAATATTGTAAAATTTCATCAAAATGTCATCACGAACCATTGCCGCATCATTGTCACATTGGAAATTGTCCTGGATGCAAGCAAATTTGTAATGAGTCATTGCCATGTGAACACAATTGTTTATATGAATGTCATGATTATGTTAAGACAATTGTTAAAGATAAAAATTTTGTGCCTGCTGGTCCATGGGATGTTCAAGAACAAAGAATTGAATATAAAAAGCTACCTCATGGACCTTGCAAGACACAAGTTGCAGTAACGTGTCTTGGAGGTCATGAAACTGTTATGGTAAACTGTTCAGATGCGAGAGTAAGTTCCTGCGGCAGAATCTGTGGCAGAATGCTTTCTTGTGGAAACCACAAGTGTCAAAAAGCCTGTCATCAAGTCAATGATTTAAATAGTGAAATTAGAGATGAAAATTGTGAAGATTGTGAACTACCATGTATGAGAGAAAGACCTATAGGATGCTCGCATCAATGTACTAGATCTTGTCATGACTCAACAAAGCCTTGCAAGAAATGTGTCGTTCAAATCAAATCTAAATGCTTTTGTGGATTGACAGAAGTTTATTACAGATGCTGTGATGTTTATAAAAGAGACATTGATGATGCGACAAGGCAAAGTCTTCTTGAGAAATATCGTTGCTGTGGTGCACGATGTATTAAACTTTATCCTTGTGGACATCAATGCACAATGAACTGTCATTTTGGTGATTGTGAGGGAGCAGAAAATTGCAAGAAAAAAGTCAAACTATTGTGTTCATGCAAAAATCGTAGAATTGAATTTTCTTGTGATAAAATTCGAGCTGAAAGCATCATTTTTGCTGACTGCAATGAAGAATGTGATGAGAAAAGGCGGTTATTAGATGAAGAAAAACAGAAAAAGTTGGAAAAACAACGAGCATTAGAAGAAGAAAAAAATAGACGAGAGTTGGAGGAGTATGAAAAGAAATTTGGACCAAAGAAATACAAAGAGAGAAAACAGAGGGTTGTTAAAGAGAAGAAAAGCAATTTTAAAATAATTGTTGGAGTTTCTACAGCAATAATTTTGATAATAGCAATTGTATTGTATTTTGCACTATACAAAAATTAA
- Protein Sequence
- MPSTKEKTSKNTNKKNNNAKFEEIQRKNQEILKERFGNEISESSDDDDGNKVEKSKIDSLFKNYQGSEIDVARIQQYFDGENLDCLICIRSVKVNDKIWNCGTCYLSYHLQCIQKWANDSMNLKRLWHDNQPVGYYDNQGTYIKKKELKLFWDCPNCRCEYKEDEIPRHYFCYCLKEIDPPNQEWLIPHSCGMVCQKPLPGLCSHKCTILCHPGKCPNCPQTIKVSCKCKKSPSKLIRCSQQFWTCSQKCGKKLACGIHNCEGICHDECPPCKEKSVKKCFCGQKSKEIKCEQEAWSCDKICKKPLSCGNHFCEKKCHGGDCGQCPFGFERSCFCGKQTFEVLRCDEQQLDSCGDTCLKQLPCGHQCFSRCHKGECDPCMEHVEKKCRCGAISKVFTCSKELLCETKCNRQKACKKHSCKARCCVDCAPCNMICGKMLTCGKHKCEALCHSGNCYPCNEKQKISCRCGSTSIFVRCGKASKQKAPKCKEYCKISSKCHHEPLPHHCHIGNCPGCKQICNESLPCEHNCLYECHDYVKTIVKDKNFVPAGPWDVQEQRIEYKKLPHGPCKTQVAVTCLGGHETVMVNCSDARVSSCGRICGRMLSCGNHKCQKACHQVNDLNSEIRDENCEDCELPCMRERPIGCSHQCTRSCHDSTKPCKKCVVQIKSKCFCGLTEVYYRCCDVYKRDIDDATRQSLLEKYRCCGARCIKLYPCGHQCTMNCHFGDCEGAENCKKKVKLLCSCKNRRIEFSCDKIRAESIIFADCNEECDEKRRLLDEEKQKKLEKQRALEEEKNRRELEEYEKKFGPKKYKERKQRVVKEKKSNFKIIVGVSTAIILIIAIVLYFALYKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250767;
- 90% Identity
- iTF_01250767;
- 80% Identity
- -