Ppem006774.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- grn
- Assembly
- GCA_014622435.1
- Location
- JACWBX010002913.1:16915-22207[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-18 3.5e-15 55.3 6.9 1 35 20 53 20 54 0.97
Sequence Information
- Coding Sequence
- ATGAGCTCGATGAAACTGCAGTCATTACAAAGTGCAGCTCGTCGTGCAGGTACATCCTGTGCGAATTGTAAGACAACAACAACAACACTGTGGCGAAGGAATCAAGGTGGCGAACCTGTTTGCAATGCCTGTGGACTTTACTATAAATTACATAATGTAAATCGACCATTAACGATGAAGAAAGAGGGAATACAGACGAGAAATCGCAAATTGTCATCAAAATCAAAGAAGAAGAAGGGTGTTGGTGGATGTCTTCCGATTGGAAGTCATTTAGGCGATCTGATGAAACCTCTCGACACAAAACCCTTCCCCAGTGGCTTCTCAACATCAATGGGGCAACATGGTCATCTTTCGGGAGGCCTTCATCCTGCACATACACACATGCATGGTGGCTGGTCAGGATGGCCCAGCGCATTAGGTGCATCGAGCAGTCTACAAAGTGGTTTTGCAACAGCAGGGTCATTGAGTGGCGGTGTAGTGCCTCATTCACAATCCTACCATCTCGGACTAAATTCAATGGGAGCATGGCGATCAGAATACACATGA
- Protein Sequence
- MSSMKLQSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGVGGCLPIGSHLGDLMKPLDTKPFPSGFSTSMGQHGHLSGGLHPAHTHMHGGWSGWPSALGASSSLQSGFATAGSLSGGVVPHSQSYHLGLNSMGAWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104832;
- 90% Identity
- iTF_00320234;
- 80% Identity
- -