Amel001212.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- grn
- Assembly
- GCA_000473525.2
- Location
- KI919851.1:12194-20779[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-18 3.2e-15 55.2 6.9 1 35 20 53 20 54 0.97
Sequence Information
- Coding Sequence
- ATGCGCTTTCCCACATCGGAGTCGCTTCAAAGTGCCGCCCGACGTGCGGGAACATCGTGCGCCAACTGCAAAACGACCACTACCACCCTGTGGCGAAGGAATCAGGGCGGCGAACCAGTTTGCAACGCTTGCGGGCTCTACTACAAGCTGCACAACGTTAATCGACCACTGACGATGAAAAAGGAAGGCATCCAGACGCGAAATCGGAAGCTCTCGTCCAAATCGAAGAAAAAGAAAGGAATCCCTGGCTCGTGTCTTCCGCTCGGCGGTCACCTTGGAGATCTGATGAAGCCGCTCGACCATAAACCCTCCTTCCCTGGTGCGTTCCCCGGTTCAATGGGACAACACAGCCACTTATCGGGAGGATTACACCCAGCACATACGCACATGCACGGTGGGTGGTATACGACTGGCATGGGAGCGCTCGGAACTTCCGGCGGACTGCAGAACGGATTCGGCGGTGCTGGGTCGTTAGGTGGAGGAGTCGTCCCGCATTCGCAATCGTACCATCTAGGACTTAATTCAATGAGCTGGCGTTCGGAGTACACGTGA
- Protein Sequence
- MRFPTSESLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGIPGSCLPLGGHLGDLMKPLDHKPSFPGAFPGSMGQHSHLSGGLHPAHTHMHGGWYTTGMGALGTSGGLQNGFGGAGSLGGGVVPHSQSYHLGLNSMSWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320234; iTF_00451604; iTF_01249726; iTF_00104076; iTF_00094850; iTF_00100676; iTF_00108051; iTF_00106144; iTF_01160992;
- 90% Identity
- iTF_00104076;
- 80% Identity
- -