Basic Information

Insect: Polypedilum pembai
Gene Symbol: su(Hw)_1
Assembly: GCA_014622435.1
Location: JACWBX010001499.1:34115-36234[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.3 3.3e+02 1.4 0.0 17 27 48 58 41 66 0.83

2 10 0.017 18 5.4 1.1 17 40 154 174 149 179 0.76

3 10 0.00024 0.26 11.3 0.2 18 40 189 208 182 211 0.89

4 10 0.07 76 3.4 0.1 17 29 220 232 209 242 0.75

5 10 0.039 42 4.2 0.9 18 36 279 294 267 306 0.78

6 10 0.14 1.5e+02 2.5 3.3 18 39 307 325 295 328 0.80

7 10 7.4e-05 0.08 12.9 2.8 14 42 331 356 323 358 0.82

8 10 0.0031 3.3 7.8 1.9 13 43 359 391 355 392 0.77

9 10 0.61 6.6e+02 0.4 1.4 17 29 391 403 385 413 0.82

10 10 3.1e-06 0.0034 17.3 3.0 14 44 416 443 406 443 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.3	3.3e+02	1.4	0.0	17	27	48	58	41	66	0.83
2	10	0.017	18	5.4	1.1	17	40	154	174	149	179	0.76
3	10	0.00024	0.26	11.3	0.2	18	40	189	208	182	211	0.89
4	10	0.07	76	3.4	0.1	17	29	220	232	209	242	0.75
5	10	0.039	42	4.2	0.9	18	36	279	294	267	306	0.78
6	10	0.14	1.5e+02	2.5	3.3	18	39	307	325	295	328	0.80
7	10	7.4e-05	0.08	12.9	2.8	14	42	331	356	323	358	0.82
8	10	0.0031	3.3	7.8	1.9	13	43	359	391	355	392	0.77
9	10	0.61	6.6e+02	0.4	1.4	17	29	391	403	385	413	0.82
10	10	3.1e-06	0.0034	17.3	3.0	14	44	416	443	406	443	0.86

Sequence Information

Coding Sequence: ATGGGTCGTACAAAAGGAAGCGTAAATAGTAAAAACAAATCAAAGGCTTCAACGCAAACAAAGCTTAATTTTCCAGTAGTAAAAAAGGATGAAGAGAAGCCGGTTGCAGCAATTCCGGTTTTAGAAGCGCCTTTGATGATATTTGTATGCAGGCGTTGTCACAATAATTTTGACACTACAGAATCATATCAAATGCACAATTGTCCAGCTCAATTATTTGCAATTGTTGAAACTGATGAAATTCAAGAAACTATTGACACAAATACTTCTAAAGTAAAATCACCTGAGAAAACAAAATCACCACAAGAGAAAAAGAAAGAAAAAGCTCCCAAAAAATCAAAAATTTCCGAAAGTAAACAGGACGAAAATGATAATGAGGAAGTTGTAAAAGAAAAGAAACCACGAAAACCTTATAAGAAACGCGAAAAGAAAAAAGATGATGATGAACCAAAAGTTCCAATTGCATGTGAAAAATGTGGCAAGTCATTTACACGAAAATATCATCTTGAAAGACATTTAACACATACACAGTGCAATCCAGGAACTTTCAAGAAAGAAGAATTCAATTGTGAAGTTTGCGGCAAAATATTTTCTCGCATTGACAATCTTCGAATGCATTTACGAGCTCATTTGGGTCAAAAATCAAGATCCAGAGACTTTCAATGTCCATATTGTGAAAAAGCTTTTTATGGATCGTCATTGCTTAATATTCATATACGTTCGCATACAAGAGAAAAGCCATATTTATGTGAATTTGAGAATTGCGGAAAAGGATTTCCATCTAGCGGAGCCCTAACAAAACATCGTAGAACACATACTGGCGAACGCCCATATGAATGTAAAATATGCGGTAATCGATTTGCAGCCAAAGAAACGTTAAATCGTCATACTCGAACACATACTGGACGACGAGATCATGTATGTCGAATTTGTGGCAAGAGTTTCATCCAGAACACACAATTACGCGCTCATCTTTTTCACCATACTGGCGAACATGCTTATACATGCGATATTTGCGGCAAACAATTCAATCGAAAGACTCGAATGCGCGAACATCTCGAGTATATTCATTTAGAAAAAAAAATGCCAACATGTAACATGTGTTCGAAAACTTTTATGCGTCGTGAAGATTTATCACGTCATATTGAGTCACATATTGGTGAAAGAAACCATACTTGTGCAATATGCGATAAGAAATTCGTTACAAAAGCTGCTGCTAGAATTCACATGAGAATTCATCAAGTTGAAGATCCAGCACGATGTAATTATTGTAACAAGGACTTTTTGCGTATGGATTGTTTAGTTCGTCATGTTCGCTCAAAACATCGTGATATGCTACAACAAATAATTGTCGAAGCTGAAACAAATAGAATCATTTCGGCACAACAAAGTAAAATTTCAGATGCTGATGAACTTGAAATTATCGTTTACAACGAAGAAGACTCTCAGGATGCAGAAGCAAGAGGGGAAGTTTATGAGGTTGTCAATGTTGAAGAGACAGTTGCTGTCAAACCAAAGGTAACAACGAAGAAAGTTGTTGAATCTATATCAGAAGATGAAGACGATTGTGCGCCAATATTTTTGGATGATGATCTTCTTATGAAGAGAATTCAAGAACTTTTGCAAATCGTTATTGAAGAAAGTCTTTTGAAAGAACTTGGATTTGGTAAAAAACCAATTGATGAAGTTTTATGCTCAGTGCTTGAGCAGTGCAGTCATAAACCATTGAGAAAATCTGATGGAGTTTTGGACGATTCAACAAGAATGCGTGAAAATACTAAGCAATTATTTTCAATGGTACTTGATGAAGATCATATCAAAAGTTTGCTCAATAATTACACAGTTGATGAAGTCATCACAATCGTATTGAAAATGGCAAAATAA
Protein Sequence: MGRTKGSVNSKNKSKASTQTKLNFPVVKKDEEKPVAAIPVLEAPLMIFVCRRCHNNFDTTESYQMHNCPAQLFAIVETDEIQETIDTNTSKVKSPEKTKSPQEKKKEKAPKKSKISESKQDENDNEEVVKEKKPRKPYKKREKKKDDDEPKVPIACEKCGKSFTRKYHLERHLTHTQCNPGTFKKEEFNCEVCGKIFSRIDNLRMHLRAHLGQKSRSRDFQCPYCEKAFYGSSLLNIHIRSHTREKPYLCEFENCGKGFPSSGALTKHRRTHTGERPYECKICGNRFAAKETLNRHTRTHTGRRDHVCRICGKSFIQNTQLRAHLFHHTGEHAYTCDICGKQFNRKTRMREHLEYIHLEKKMPTCNMCSKTFMRREDLSRHIESHIGERNHTCAICDKKFVTKAAARIHMRIHQVEDPARCNYCNKDFLRMDCLVRHVRSKHRDMLQQIIVEAETNRIISAQQSKISDADELEIIVYNEEDSQDAEARGEVYEVVNVEETVAVKPKVTTKKVVESISEDEDDCAPIFLDDDLLMKRIQELLQIVIEESLLKELGFGKKPIDEVLCSVLEQCSHKPLRKSDGVLDDSTRMRENTKQLFSMVLDEDHIKSLLNNYTVDEVITIVLKMAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01250363;
90% Identity: iTF_01250363;
80% Identity: iTF_01249349;