Ppem016885.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- Lztr1
- Assembly
- GCA_014622435.1
- Location
- JACWBX010003396.1:8360-13465[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-14 2.6e-12 46.8 1.2 1 107 376 508 376 511 0.89 2 4 4.5 5.5e+02 0.7 0.1 76 108 509 541 506 543 0.87 3 4 6.2e-21 7.6e-19 67.9 0.0 8 105 602 701 596 706 0.83 4 4 3.6 4.3e+02 1.1 0.0 77 100 705 728 700 737 0.83
Sequence Information
- Coding Sequence
- ATGTCACGAATGAGTCATTCTTCTTCTTTAAAGAGTCACAAACTCTTCTTATCAAATGATAAACCAACAACATCAAATTTAACAACGAATACACACCACAACTCTTCTGAATTTAATTTTGGTGATAATGTCAATCAATGGAAGAAATATTTAGAAGTTGATGAATTTGTCGGTGCAAGACGAAGCAAACACACTTGTGTTGCATATAAAGATTCGATATTTTCGTTCGGAGGTGATAATGGAAAAACAATGCTCAATGATTTGATTCGTTTTGATGTTAAAGATAAATCATGGGGTAGAGCATTTAGTAGTGGTCAAGCACCGGCTCCTCGTTATCATCATTCTGCTTGTGTTTATGAGAAATCTATGTATATTTTTGGAGGCTACACAGGAGATATTTTTTCAAATTCAAATTTAACAAACAAAAATGACCTTTTTGAGTACAAATTTCAAAATGGCCAATGGGTTGAAAGAAAGTATGTTGGTAGCAAATATCCAGCAGCAAGAAGTGCTCATGGCAGTGCAGTTTATAATGGTTATTTGTGGATTTATGCAGGATATGATGGAAATCATAGATTAAATGATTTATGGCGAATTCCATTAAATGGTGAACCACTTGAATGGCAAGAAATTGAACAACGAGGTGATGTTCCACCAACATCATGCAATTTCCCTGTTGCAGTTGCTCGTGGCTGCATGTATGTTTTCTCAGGTCAATCAGGATTACAAATTACAAATACTCTCTTTGAATTTAACTTTGAAGAACGTTGCTGGCGACGAATTTCACCTAATTTTGCAATTTCACCTAATACAATTCCATCAAGACGTTATGGCCACACAATGGTCTCACATGATCGATATCTTTACGTTTTTGGTGGTGCTGCTGACTCAACATTACCCAATGATCTTTATTCTTTTGATCTTGACTCTCAAGTTTGGAATTTGGTTGTTCCTGCTGCAGATTCTACTTGTCCAAGTGGAAGATTATTTCATACTGCTGCAGTTATTAATGATAGCATGTGGATTTTCGGTGGCACAATCGAATCAGGTGGAATGAACATTCGCTCTGGTGACATTTACAGATTTCAATTTAGTTCTTATCCAAAGGACACATTGAGTGAAGATTTTCAAAAATTTCTTCATTCAAAGCAATTTTGTGATGTTGTTTTCATTGTTGGACCAGATGAAGTTAAAATTCCAGCACATATTGCTATCATTGCTGCTCGCTCACAATTTTTAAAGACAAAAATTAAAGCAGCAAAAGAATCAAGAGATCAACATTTTGAGAAACTTTTTGGAACTGAAATGCCACAATTTTCAGCTGAAATGCCACAATTGGAAGTAAAATTACCAAATATTCAACCTGATGCTTTTGAAATGGTTTTATCTTACATTTATACTGACATAATTGACTTCAAAGATCCTTTTAATAAGCGAATTGTTCCATTAATGATGCAAGTTTATTTACTTTCACTTGAATTTAATATTTCACGTTTAGAACATTTATGTATGCAATATTTAGAGTTTAAAATTGCTAAAGCAAATGTTCTTGAAGCACTTTTTAATGCTGATAAAATGAATCTTCAATTAATTAAAGATTATTGCTTAAATTTTATTACTAAAGAAGATAATTTTTATGACATTGTTATGAGTTCAGATTTTGCTGCTTTAGATAAACATTTAATTGTTGAAAGTGTTCGTAAGAGACTGAACCCAAGTAAACAATCATCTGATATGAAATATGATAAAAGTATCGGCACAACACTTGAAAGTGACATGGCAGTGTTCCTAAAATCAACTGGTAAAGAATTTTGTGATATCACACTTGTTCTTGATAATCATCAAATACCAAGTCATAAATCAATTCTTGCTGCACGTTGTGCTTACTTTCAAGCAATGTTTCGTTCATTTAATCCAGCTGATAACACTGTAAACATTCAAATTGGTGATGTAAAGCCAAGTTTAGAAGCTTTTAATTCTTTATTAAGATTTATTTATTATGGTGAAACAAAAATGCCAGCTGAAGATAGTTTATATTTATTTCAAGCTCCATGTTTTTATGGATTTACAAATAATCGTTTGCAAGCCTTTTGCAAGCATAATCTTGAGAATAATATCAATTATGAGAATGTTTTACAAATACTTGAAGCATCGGACAAAATGAATGTGCCAGATATTAAAAATTATGCTCTACGAATGGTTGTTCATGATTTTGCATTAGTTGCAAGATTACCAAAAATGCGACAATTAAGTCGTGAGTTGCTGCTTGATATTATTAATTCTATGGCAGAAGTTTTAAGTGAAGGTAAAATTAGTCAAGATTTGATGTCTTCTATTAGCATTCATAGTGATATTTGA
- Protein Sequence
- MSRMSHSSSLKSHKLFLSNDKPTTSNLTTNTHHNSSEFNFGDNVNQWKKYLEVDEFVGARRSKHTCVAYKDSIFSFGGDNGKTMLNDLIRFDVKDKSWGRAFSSGQAPAPRYHHSACVYEKSMYIFGGYTGDIFSNSNLTNKNDLFEYKFQNGQWVERKYVGSKYPAARSAHGSAVYNGYLWIYAGYDGNHRLNDLWRIPLNGEPLEWQEIEQRGDVPPTSCNFPVAVARGCMYVFSGQSGLQITNTLFEFNFEERCWRRISPNFAISPNTIPSRRYGHTMVSHDRYLYVFGGAADSTLPNDLYSFDLDSQVWNLVVPAADSTCPSGRLFHTAAVINDSMWIFGGTIESGGMNIRSGDIYRFQFSSYPKDTLSEDFQKFLHSKQFCDVVFIVGPDEVKIPAHIAIIAARSQFLKTKIKAAKESRDQHFEKLFGTEMPQFSAEMPQLEVKLPNIQPDAFEMVLSYIYTDIIDFKDPFNKRIVPLMMQVYLLSLEFNISRLEHLCMQYLEFKIAKANVLEALFNADKMNLQLIKDYCLNFITKEDNFYDIVMSSDFAALDKHLIVESVRKRLNPSKQSSDMKYDKSIGTTLESDMAVFLKSTGKEFCDITLVLDNHQIPSHKSILAARCAYFQAMFRSFNPADNTVNIQIGDVKPSLEAFNSLLRFIYYGETKMPAEDSLYLFQAPCFYGFTNNRLQAFCKHNLENNINYENVLQILEASDKMNVPDIKNYALRMVVHDFALVARLPKMRQLSRELLLDIINSMAEVLSEGKISQDLMSSISIHSDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199156;
- 90% Identity
- iTF_01250167;
- 80% Identity
- -