Ppem016672.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- dmd-4_1
- Assembly
- GCA_014622435.1
- Location
- JACWBX010002588.1:60491-62922[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-20 7.9e-17 60.8 9.1 7 47 27 67 21 67 0.96 2 2 0.35 5.6e+02 0.5 1.6 20 37 266 283 263 288 0.66
Sequence Information
- Coding Sequence
- ATGGTGACTGCTTCACGACTATTATATGACCTGCCGTATGAGAGTCGCATAATGGGTCGTCGAGGCTACCATAAAGACGAATGCAGAAACCACGGAATAATTTCAGGCTTGCGTGGCCACAAGAAGCAATGCACTTACAAACATTGTCGTTGCTCAAAATGTGATTTAATTTTTGAACGTCAGAGAATTATGGCACAGCAAGTTGCACTTAAACGTCAACAAGCAGTCGAAGATGCCATTGCATTGCGTTTAGCTTCAAATGAAACAGGCAAACAACTTGATAGTCTTCCGCCTGGTAAAATTTATGGAATGAAAGTCACTGAACCGAAACCTGAACGTTCAAGTTCACCCATATCACCTCAATTACTGCAGCACACCCCACATGATATACAACCGGCTTCTGAAGATGCAGACAAAAAAACAGAATCAGTCACATCAAGCACTCCGACTGTTTCACACAATGCTATCGAAATGCTTTCTTCACTCTTTCCACACCGCAAACGATCAGTGCTAGAGTTAGTTTTGCGTCGTTGCGATCTTGATTTGTTGAGAGCAATCGAGCAATGCAGTAAAACGCAAACACCGTCACATTCAGTAATCACACGCGAATCTCCCGCATCAAGCCCTGAAATTCAGAGCGCGTTTCGACCGATTACACATAGCTCATCAGCAACAACAACAATCACTCCAACATTACATCAATTATCAGCTATTCCAACTCAAAATCCATCGAGCTACACTTCATTGATTGCATATCCAAACAAGTGGTTCTTGCCAATTCCCGTAACAATGAGTCATCATCATCTTACAAACTTTCCTCGCTGTAATTTGGCAAATTGTACAATGTGTTTGCATCATCCACCAACTTTGTAA
- Protein Sequence
- MVTASRLLYDLPYESRIMGRRGYHKDECRNHGIISGLRGHKKQCTYKHCRCSKCDLIFERQRIMAQQVALKRQQAVEDAIALRLASNETGKQLDSLPPGKIYGMKVTEPKPERSSSPISPQLLQHTPHDIQPASEDADKKTESVTSSTPTVSHNAIEMLSSLFPHRKRSVLELVLRRCDLDLLRAIEQCSKTQTPSHSVITRESPASSPEIQSAFRPITHSSSATTTITPTLHQLSAIPTQNPSSYTSLIAYPNKWFLPIPVTMSHHHLTNFPRCNLANCTMCLHHPPTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -