Ppem005209.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- dsx
- Assembly
- GCA_014622435.1
- Location
- JACWBX010003755.1:79599-90970[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.4e-21 1.3e-17 63.3 17.0 2 47 18 63 17 63 0.98 2 3 1.9 3.1e+03 -1.9 3.8 9 26 103 120 96 122 0.84 3 3 4.3 6.8e+03 -3.0 0.1 33 36 161 164 152 168 0.52
Sequence Information
- Coding Sequence
- ATGAGTGAGCAAAAGATAAAATCGAAAAAGTCTTTGAATTTAAATAGAGCTACACCATACTGTGCTCGATGTCGAAATCATGGACTCAAAATGAAACTTAAAACACACAAACGATATTGCCAATTTCGATGTTGTTCTTGTGAAAAATGTAATTTGACAATGCAACGACAGAAAATTATGGCACATCAAACGGCAATGAGAAGGGCCATGTTACAGGATGAGTTAAGAAATCAAAATTATAGTCATAATTACAATAATGATTCTTTGGTAACTTCTACATCAACAACTTCATGTCATTATCAACATCACAATCATTCACAACAAATAAATCATCAAGGACATCAAAATAGTTCGAATTACAATCGCGATGATATCATGGACTCGGTTAATTCTGTTGCACAGCATTTGGGATATGATACTCATGAAAGCAAAGCATTCATTTATGCGATACTCAAGTGTGCCAAAAATAATGTCTTTGAAACATGTCAAATGATCATGAATGGGAGATTTGCGACAAACGAGTTCTTGAAAATTCAAAATGTTTTGAAAATTGAAGACTTTGAAGCGAATCCAGTCATAAGTTATTCATCACACTTAAGCAATCAACATCGCAACAATAATAATCTAATAAATCAATCTTACAATGACAATGTCTACACTTGGTAA
- Protein Sequence
- MSEQKIKSKKSLNLNRATPYCARCRNHGLKMKLKTHKRYCQFRCCSCEKCNLTMQRQKIMAHQTAMRRAMLQDELRNQNYSHNYNNDSLVTSTSTTSCHYQHHNHSQQINHQGHQNSSNYNRDDIMDSVNSVAQHLGYDTHESKAFIYAILKCAKNNVFETCQMIMNGRFATNEFLKIQNVLKIEDFEANPVISYSSHLSNQHRNNNNLINQSYNDNVYTW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -