Ppem016278.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- LRRFIP2_1
- Assembly
- GCA_014622435.1
- Location
- JACWBX010004459.1:48822-49783[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.094 8.1e+02 -1.0 0.4 230 260 73 103 45 147 0.54 2 2 4.6e-31 4e-27 95.2 15.4 1 93 157 250 157 253 0.85
Sequence Information
- Coding Sequence
- ATGGACGAAACGAACAATAATCCATTGCGGATTGTCGAGGATGACATGCCGCTGACGATATCGAAAAGCGATAACGAAAGTGATAATGATTCGAATGTTGGTGAAGTCTTTGATTTCAGTGTCAGTGATATAGAAGAGCTTGAAGGTTGCACAGACATTGAAGAAAAGAAAAAGCGAAATAGCTTATTAATTATTGAAGACAAAGATCTGATTATGGAGTCGAATGAAGATTTTAATAACAACATTCATCGTCTATCGTTACAAATTGAGAGCGGCGGCGACAGTGATAGTCTTGTAATGACAAATGAGGCTATTAATCGAACAATTATTCGCATTGGTTCAGGTAGTGGCATCGAGTATGTTGATAATAATCAAGAGCAAACGAATGAATCAATCAGTGATAAAGATGAAAGTGAGAGTGAAGCTGACAAGGCAATAGTTAATATTCTAGGGCAGATCGACGAAATAGCTGAAGCACGATTGGCAGCAAAACGACAAGCAAGAGCAGAGGCGCGTGAAATTCGTATGAGAGAACTGGATCGACAGCAGAAAGAACTGGAACAAAATGCAGATAGAGCCTACGACATGCAGCAGTCGGAGGCGTTGTCGACGCCACGTTCACGATTGACAGTCAATAATAATCATTTGAGCTCTCGAGGAAATTCAATGACGCCGTCATCAAGACGAAGCAGTGAAGATTCATTAGAAGAAGAAGGCAGAAGTTTGAGAGATCTCAGGCATGAGTTAAAGGCAAGTTTTGCTTTTATATTTTAG
- Protein Sequence
- MDETNNNPLRIVEDDMPLTISKSDNESDNDSNVGEVFDFSVSDIEELEGCTDIEEKKKRNSLLIIEDKDLIMESNEDFNNNIHRLSLQIESGGDSDSLVMTNEAINRTIIRIGSGSGIEYVDNNQEQTNESISDKDESESEADKAIVNILGQIDEIAEARLAAKRQARAEAREIRMRELDRQQKELEQNADRAYDMQQSEALSTPRSRLTVNNNHLSSRGNSMTPSSRRSSEDSLEEEGRSLRDLRHELKASFAFIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -