Ppem013572.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- bab1
- Assembly
- GCA_014622435.1
- Location
- JACWBX010001921.1:7072-9488[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-12 4.1e-09 35.9 0.0 3 43 482 522 480 524 0.90 2 2 3.5 5.6e+03 -2.9 0.5 4 18 617 630 617 632 0.82
Sequence Information
- Coding Sequence
- ATGGGAAGTGGGAATGATATAAATAATGGCGCTGCCAAAAGTGGCACGGGCGTATGGTCATCAGATGGTCATGGATATTGCCTCAGATGGAACAATCACAAATCGAATCTCGTGGAAATACTGGAAGCACTCATCAAAATGGAATGCTATGTAGATTGCACAATTTATGTTGACAATCATGTGCAATTTAAAGCACACCGTGTTGTGCTTGCCGCGTGTTCACCATATTTTCAAGCCATACTACAAGACGCTCCACAAGATCACTGCAGTATCATCTTTCCAGGTGTACAAGAATTTGAAATGCGAACACTTTTAGAGTATATCTATGCTGGTGAAGTTAATATTGCAGAATCACAAATACCACGCATAATGAAGATAGCAAAGATGCTTGAAGTCAAAGGACTACTCGATATGGTTGATCTCACAAGCAACATCAGTCAGCAGCAACAGCAACCAATTTCTACACCACCAAATCACAATAATCTCTTTCGACAAGAGTCACATGCCAGTATATTATCAGAAAGTAAACGCGACAATCAAACTTCATCCTTTCCACTTCATCATCATCCACTGACACACTCATCACCAATTATTTCAACATCAACTAAGATCTCATCAGCACAGAGCTCATCATCACCGCCATACAATTACAAATCATCGCCATATGTTGCAAGTCTATACTCACAAAGTCCTAGCGGTACGCGTGATTTAATAGCTGGTCCAGGAATGCCCAATCAAGAGATGGGTGATGAAGAAAGAGGAATTCGAAATTGGCCACCACCCTTACCACTTTCACTTGCACGATCGGCTCAATCAATGCTCAGCTCTGTGTACGAAACTGGCTCCGATATGAATCCATTAAAACGCAAGAAACTTTCGTCAATAAACTCAATGCTGATGACACGTGACACACCAATATTAAGAAACGTTCTTGCTCAATCAAATGCCGCTGACTCATCACAAGGTAGCGTACATCCACAAAATGCCAATAGTCCAACTCGTGCTGACCTCTCAAGTCGAAATGATGGTAATGGTAATGGAAATGGAAGTGATAACATCGAAAATAATGACACTAATAATAACGAAAATAATGGAAATAATGCTGGAAATGCGAGTGGCGGAAATAATGGATCCGTTTATGTGAGCTATGCTCGCAAGAGTGGTGATCGCAGTTATCACTCATCAAATGGCAGCGACAATTCGGAAAAAAAATATAAAGATGAAGAACCAGCATCACCACTTACTGAAAGATCATTTGATGATGAATCAATGAATGATTCAAGACAACGTGTATCACCGCCAGAATTTGATATGAGAATTCCTGCATATTTGCAACAACAAGCTCAATTTCATCAGGCTCAATATCAGCACCAAAGTGGAGGTCAAGTTAGTGGATCAAGTTCACAAAAACCTGAATGGAAGCGATACAAGCAATATACCCGTAATGATATTATGTCCGCAATTGAGTGTGTTCGCAATGGAATGAGTGCGCTTCAGGCAAGTCGCAAATTCGGTGTGCCATCACGTACATTATATGATAAGGTAAAGAAACTGGGAATAACGACGGGAACACCTAGAAATCGTTCGTCATCGAAACGTGATCCCGGTCCAAGTTCGAGTAGTGCTGCATTCCCATATGGTTCATTAAGTGGCGCAGCAGGTGCCTTTTTGTATCCAAACCAAGACAATCAGTTATCACAATCGCAAGATTTTGATTCTGAACTGGAAAATGAACTCAAAATTCATCGACCAAATCCGCATGCAGGTCTTCTTGATCCTGTTTTTCTACAAAAATTAGCACAAGAAGCTCGCAGTGATGAATTCAGAGGTGATGCTTTGCATGCAATGGCATTAGCTGCTGCAGCTCACGCGCAATTCAATGGAATGGGTGCAAGTTCTCGCCCTCATGAATCACAAAGTGCCAGTGTTCTTTCAAAATTCATGAATCGCCATAGTGAAAGCATAGACATGGAACGTGAACGAATGGACCGAGAAAGAAGTCGATCGAATGGCGATCAAACATCATTGATTAAAAATGAACCAGTCGATGATGATAGTGATGAAGATATGGAAAAGGCAGAAAATTTGTCGCTATCGAAACGTGAATCTCCACCAAATATTACACCACCACCTCAAGCTCAAACACCACCTTCATTTGAAGCGCGTGGTGTAATTGTGCCACCAATGAAATATACATCCCCACGTTCGGAACCCTCTTCAACGACACCACCAAATATAAGCGAGCAAGCTCTGTCATTAGAGAAAAGTGAGTGCAAACAGCAAAGCTTCAATAATGATGCTCCAATTGCATTGACACCGACAACTACAGCCAATTATGATGATTAA
- Protein Sequence
- MGSGNDINNGAAKSGTGVWSSDGHGYCLRWNNHKSNLVEILEALIKMECYVDCTIYVDNHVQFKAHRVVLAACSPYFQAILQDAPQDHCSIIFPGVQEFEMRTLLEYIYAGEVNIAESQIPRIMKIAKMLEVKGLLDMVDLTSNISQQQQQPISTPPNHNNLFRQESHASILSESKRDNQTSSFPLHHHPLTHSSPIISTSTKISSAQSSSSPPYNYKSSPYVASLYSQSPSGTRDLIAGPGMPNQEMGDEERGIRNWPPPLPLSLARSAQSMLSSVYETGSDMNPLKRKKLSSINSMLMTRDTPILRNVLAQSNAADSSQGSVHPQNANSPTRADLSSRNDGNGNGNGSDNIENNDTNNNENNGNNAGNASGGNNGSVYVSYARKSGDRSYHSSNGSDNSEKKYKDEEPASPLTERSFDDESMNDSRQRVSPPEFDMRIPAYLQQQAQFHQAQYQHQSGGQVSGSSSQKPEWKRYKQYTRNDIMSAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGTPRNRSSSKRDPGPSSSSAAFPYGSLSGAAGAFLYPNQDNQLSQSQDFDSELENELKIHRPNPHAGLLDPVFLQKLAQEARSDEFRGDALHAMALAAAAHAQFNGMGASSRPHESQSASVLSKFMNRHSESIDMERERMDRERSRSNGDQTSLIKNEPVDDDSDEDMEKAENLSLSKRESPPNITPPPQAQTPPSFEARGVIVPPMKYTSPRSEPSSTTPPNISEQALSLEKSECKQQSFNNDAPIALTPTTTANYDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250011;
- 90% Identity
- iTF_01250011;
- 80% Identity
- iTF_01249217;