Ppem008749.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- retn
- Assembly
- GCA_014622435.1
- Location
- JACWBX010003524.1:77685-103406[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-25 3.7e-22 78.5 0.0 2 89 235 320 234 320 0.96 2 2 2.6 6.4e+03 -2.4 0.0 10 39 390 419 386 439 0.76
Sequence Information
- Coding Sequence
- ATGAATATTAAACTCGAATTATATATATATGAGTGGAGGAGCACAGTAAGAGGGCACATACGTGTTATGGATACAAGAGACTCAGACCTGGGAGACGATTCAATGTCACATATCGATGAACAATCGGACCGAGAGGAAGATTTGCGTGATTGTGATTCAAGTGATGAAGGCGTTAATGTAAACGGAACAAACGGTACATCAGGCATGAATTTCAGTCGTAACAGTCCCGATCGCAACAGTGATTTACACGACACACCATTTCCACCGACCCATCCACTAGGGATGCTCAGCAATCTGACAGCTCTCAATATGGGCGTGCCGAGCTTGCAGTCTTTTCAACAGCACAATGATGTCTTGGAGAAAATTAAAATGCAAGTTCGCGATATGAAAGTTGGGTTCATGAACTCTGACTTTTCTGCACTACATCCGTCATTTACAAGCACACTACAGAGCACTCTTGGTTTCAACGCTCATCAAGTATCACAGGCACAAAATAACAATCAAAATTCATCATCACATGGCAACAATGACTCACCCAATGGATTTCCATTTTCATCACCGACACCAGCAGCAAATAAAGATGCCTCAAACTCATCAACGTCAAGTGAAACGTCTAATTCGTCACAGCAAAACAATGGCTGGAGCTTTGAGGAGCAATTCAAGCAAGTGCGACAGCTTTATGAAATCAACGATGATCCGAAGCGTAAATTATTCCTCGACGATCTCTTTCTCTTCATGCAAAAGCGAGGCACGCCGATCAACAGACTTCCAATCATGGCAAAATCAGTATTGGACTTGTATGAGCTCTACAACTTGGTGATAGCTCGTGGTGGTCTTGTTGATGTGATTAATAAGAAACTATGGCAGGAAATCATTAAGGGTTTACACTTACCATCAAGTATCACTAGTGCTGCATTTACATTAAGAACACAATATATGAAATATTTGTATCCATATGAATGTGAGAAGAAAAATTTGAGCACGCCAGCTGAGTTGCAAAGTGCAATTGATGGCAATCGACGAGAAGGTCGCCGAACAAGTTATGGACAATTTGAATCACAGATGCAGCAACAATTACAATTGCCACAAATGCAACGATCACCAATACCTAACAGTCTTCAACAAATGTCACCACTTTCACTTGTTACACATGCAAATCAACAAAGTCAGCATCATCATAGACTAATGGGAGCTCCAAGTATGGTTCCACATGATATTGAACAAAGAATGCTTGAATACATTAAACTTTTCCAAGCACCAAAAGATATAAAACGCCCACAAAGCCCACCAGATGTATCGCGCGAGGCTTTAAATGCATTAGAAATGTCACGAATGGCTCTATGGAATATGTACAACAACACAAACCCACTTAATCAGCACAATCCTAGTCCACCTGAAGTACAACAAGAAGAAGCACTAAATCTTCAACAAACACCATCGCCCATTCCGACTGCACCTTCTCCCATCTCTATAAAACGTGAACGTGATCACAGTGAATTGATAGATTATCACGCTCCTGCAGCTAAACGAGGCTTAGTTCGATCAAATAGTGATCTCTCAAGGAAATCATCCATTAATAACAATCAACATCATCATCACGCCAGTAACAATAATAATAACAACAATATTTCACATTTGACACCGATAAAAGACAACAAGCGGTCAGAATCACCATCACCGCAACGTCAACAGCAATCGCAACATAATGATAACGGTAGTCATCATTTACAATCGCCAATAAGACATCATCACAAAACAACCAATGGGTTGGACTCTTTTATTCCCATTCTTAATGGAATGCAATTTAAAATCATCGGTAAAGAAAGCTCAGCGACAGGTGAACAGCAGCTAGTAGTCAAGTTGGAACTCAATGGAGTATCTTTTGAAGGTACACTTTTTCCTAATCCTAATCCCAACTCATCATCACCAACAACTTCAGCCTCAACTCCTTCGACAGAGCCAATGATATCACCTGCAAAACACTCATCTCCAAATCGAAATGACGATCACAAAATGTCACAACCACAACAACAAATGATTTCCTCATAA
- Protein Sequence
- MNIKLELYIYEWRSTVRGHIRVMDTRDSDLGDDSMSHIDEQSDREEDLRDCDSSDEGVNVNGTNGTSGMNFSRNSPDRNSDLHDTPFPPTHPLGMLSNLTALNMGVPSLQSFQQHNDVLEKIKMQVRDMKVGFMNSDFSALHPSFTSTLQSTLGFNAHQVSQAQNNNQNSSSHGNNDSPNGFPFSSPTPAANKDASNSSTSSETSNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKLFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQSAIDGNRREGRRTSYGQFESQMQQQLQLPQMQRSPIPNSLQQMSPLSLVTHANQQSQHHHRLMGAPSMVPHDIEQRMLEYIKLFQAPKDIKRPQSPPDVSREALNALEMSRMALWNMYNNTNPLNQHNPSPPEVQQEEALNLQQTPSPIPTAPSPISIKRERDHSELIDYHAPAAKRGLVRSNSDLSRKSSINNNQHHHHASNNNNNNNISHLTPIKDNKRSESPSPQRQQQSQHNDNGSHHLQSPIRHHHKTTNGLDSFIPILNGMQFKIIGKESSATGEQQLVVKLELNGVSFEGTLFPNPNPNSSSPTTSASTPSTEPMISPAKHSSPNRNDDHKMSQPQQQMISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01249855;
- 90% Identity
- iTF_01249855;
- 80% Identity
- -