Basic Information

Insect: Polyommatus iphigenia
Gene Symbol: -
Assembly: GCA_963422495.1
Location: OY730187.1:3442747-3467108[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.38 36 6.1 0.1 2 23 461 482 460 482 0.86

2 16 0.074 7 8.3 1.3 1 23 492 515 492 516 0.94

3 16 0.0041 0.39 12.3 0.8 2 23 682 703 681 703 0.95

4 16 5.6 5.3e+02 2.4 0.4 1 23 715 739 715 739 0.87

5 16 1.8e-05 0.0017 19.7 0.6 2 23 746 769 745 769 0.97

6 16 0.077 7.3 8.3 0.5 1 23 775 797 775 797 0.94

7 16 0.0041 0.39 12.3 4.2 1 23 803 825 803 825 0.98

8 16 2.3 2.2e+02 3.6 0.0 3 20 837 854 835 856 0.89

9 16 0.027 2.6 9.7 0.4 1 23 931 953 931 953 0.97

10 16 3 2.9e+02 3.2 6.2 1 23 960 982 960 982 0.95

11 16 0.0017 0.16 13.5 1.8 1 23 1015 1038 1015 1038 0.95

12 16 0.0059 0.56 11.8 0.8 1 23 1045 1068 1045 1068 0.97

13 16 0.18 17 7.1 0.2 2 23 1088 1110 1087 1110 0.95

14 16 0.072 6.8 8.4 0.1 2 23 1129 1151 1128 1151 0.95

15 16 8.7e-05 0.0082 17.5 0.6 1 23 1174 1196 1174 1196 0.98

16 16 0.00071 0.067 14.7 0.3 2 23 1205 1227 1204 1227 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.38	36	6.1	0.1	2	23	461	482	460	482	0.86
2	16	0.074	7	8.3	1.3	1	23	492	515	492	516	0.94
3	16	0.0041	0.39	12.3	0.8	2	23	682	703	681	703	0.95
4	16	5.6	5.3e+02	2.4	0.4	1	23	715	739	715	739	0.87
5	16	1.8e-05	0.0017	19.7	0.6	2	23	746	769	745	769	0.97
6	16	0.077	7.3	8.3	0.5	1	23	775	797	775	797	0.94
7	16	0.0041	0.39	12.3	4.2	1	23	803	825	803	825	0.98
8	16	2.3	2.2e+02	3.6	0.0	3	20	837	854	835	856	0.89
9	16	0.027	2.6	9.7	0.4	1	23	931	953	931	953	0.97
10	16	3	2.9e+02	3.2	6.2	1	23	960	982	960	982	0.95
11	16	0.0017	0.16	13.5	1.8	1	23	1015	1038	1015	1038	0.95
12	16	0.0059	0.56	11.8	0.8	1	23	1045	1068	1045	1068	0.97
13	16	0.18	17	7.1	0.2	2	23	1088	1110	1087	1110	0.95
14	16	0.072	6.8	8.4	0.1	2	23	1129	1151	1128	1151	0.95
15	16	8.7e-05	0.0082	17.5	0.6	1	23	1174	1196	1174	1196	0.98
16	16	0.00071	0.067	14.7	0.3	2	23	1205	1227	1204	1227	0.95

Sequence Information

Coding Sequence: ATGTCGGACGACATTCAACCACTCATTGTATGCATGGAAAACAATGATGGAGAAAAAGTTTCCCTCAGAATTAATCCTACCGAtagttttcaaacatttttagaTAATGCGAAGGCACTATTAGGCTACGATATTGATTTAGATTCAGTTACCAATAACCAACCAGTATCACTCGAGGACAATATTTatacttttctattgaatatGGAAGATGATACACACAATAGAAAAGAAGATCCGCTTAAGTGTTATGAACTAGAATACGTATTAGGCGATGGGACACAAATTGAATCATCACAAATACAATTTGATAATGAAGACACAATAATAGATTTGAGTGCTGTACATATTCCATTTGTTAAATTCGTGGAAGGATCCAGCGAAGATGAAATTAATTTTTCAGAAAAGATTACGCCAGTAAACTACGTTATCCCTGAAAGTCCGCAGTCAATGCGTTCTTCTACTCCCACATCTGAATTTGTTAATAGCCTCCCGTTTAAACTTCATTGCAGTAACGCTTCACATTTTGAAAGGTATTATAACAAATACTTAGAGCTAAGCATGAATACTTCTACTGTTTTTAACGCTATTGATAAAAAAagcaaaaatgattttaaattaagatGCAATACAACGGCGACAAACCAAAACAAATTTATGACTAGAGACGATATACTTAACATATTTAAAGATTCTCCTGTTAATTCCCTTCCGTGCGAAGAGAGTAAAAATAGCAACCACGAAAAGCGCAAGCATGTAAGAAAAACTGATCCACTGGGACAAGTAAAAAAGAATTCCAGTAATAAAGTAGAAGCTGAACCTGACCAAAGTGCGAAAAATTACGAATGTTGTATATGTGACAAAATCATAAGCAATATAATGGAAAAATcgtatatttttgataaagaagaTCAAATGATTCATCGAACAGAACAAAGAAAAACTGTTACCCATTTGAAAATTCTGTGCACACAATGTTTATGTAATCATTTTCAACCGAGCATCATGAAAAGTCCAAGCCAATCATTAAATAACGACGAATATTTAGTAATACAAAATAATCaacaatttatatttcaaaagaCAACGCCGATTGTTTTAAAAAAGATAAGCATcgatttaaatacaattttaagcAATGGTAAAAATATAGAGAATTCTAAAGTTCAACAGGAGATTAATAAGGAAATAACATCAAGTTTTAAAGGAAATGCAAAAGAACCCGCTGATGTGATCGTTGATACcgatattaaattttctgatgCTATAGAAATAATCGAACCAGACATTGACTGTGACAATATTGATAAAATAGAGGACGAAGTTGTTATGGAATTTTTAGGTAAAAATGAAAAGTGTGATATGAAGGATAAGGAATTAATTTGCAGATTTTGCGATAAAGCGTTTGAGAACATTTCTCAAGTGGTCGATCATGGAGATGAACACAAACACGATTTAGATGACGGACCTCTTTATCCTTGTCCACTTTGCGACTATGGGTATGCTAAAAATAAGTGGCTCAAATGTCATATCAAAGCTGTTCATCATAAAGTTGAAGACAAGCCTCTTATTAAAGAGGAAGAAGAGAATAAAGAGACTCTATCACGTGAACCATCGCCGGTGGCTAAAAGAACAAGAAGTTCAATTAAGAAAAGTGTCCAAGAAATTGATAtagGGTGCAATGAAAAAGCAACTCAAGAAGTAAAGTCTATTGATGAGGCTAAGTCTCCACTGGTATTGATAACGGAGGTGAAGCAAGAGATCTTGGATAGCAGTGATGAGGAGGCGATATGGATTCTTCAGGCGGAAGCCGAGGCACAAGGAAaccaaaacaaacaaacatCTGATAAAGTTGACGTCAAAACTGGAGAAAAATCAGACAAAGAGCCAAAGTGTAACAAGTGTTTACAAATACTCAGTTCGGCGGAGGCTGTAAAGGCTCACAAATGTAGAAAGCGAGAAAGAAAAAGAAACGCAAAGGTAGATTCCGTAAAGAAACCTCAAAAGAAGAAGGGCAAGAGTTCAACAGAACCCCGAATAGTAACATGCGATATCTGTGACGAGTCATTTAGTTCCAAAGTGAGACTAAAATTTCACATGCAATTCCACGAGCCTAGCGCCAACATAACTGCAGACGGGGAGTACCTATGCTCAGAATGTGACGGCGCGACCTTCCCGAGCGAGACGGAGCTATTCGACCACGTACACTTTCAACACAAGAAGAAGAAACGTTGGCAGTGCCCAACGGAGGGCTGCGGAAAGACTTTTTTTTTGCGGACGACGTTGACGAAGCACATTCGCACGCACACCGACACGCGCCGCTATGTGTGCGTCACGTGCGGCAAGCGGTTCCTCAACAAACAGACGCTAGACGAGCATAGTGTTACACATCTTCAGATCAAGCCCTTTTCGTGCCATATTTGCCTGAAGCAGCTGACGCGGCGATCGCGGCTGCGCATGCACCTGCGCTCGCACGAGGAGGAACCCTCGCCGCGGCTCGTGCTCGCCTGCGCCGTCTGCCGCCGCGCCTTCGCCACAGCCGCTGAAGCTACGgagCACGTAACAATGTCGACTGAGTGCTTGGAACTTTTCGCGCTAGAAGTAAAGAAGGAGACCGAAACAGAAGAACTGTCTCCTACCACCGGCATCGTGACGCAGTATTCTGAGAATAAGAGTTCTGTCAATGATCCAATAGAGCGTGAGGTGAACACAAGCGAGAGCGCCGCGCTGCTTGAGGCTGTGGATGATGTGGCGAGGGCCATAGTGCGTGTTGTGAACATAGAGAAGGCGTTTCGATGCGAATACTGCGAGGATGTTTTCTACTTGGAGGACGCTTTGAACAAGCACAGGACAATACATAAAGGAGTTAAAAATCCTTTTATCTGCCATATATGCAAAGTTAGTTTTGCAACCTACTCCAGATGTACTACCCACAAGACGACTCACGGGTTCTACAAGCGCAAGGAGAAGGATGTTGCTACCAATAACGCCGGACCGAACGCGGGTATACTCGGCTACGGGGGATTCCCCGTCGCCAAACACTTTTTATGCGAGGACTGTGGGCGCTCGTACCTGCACTGGACGTACTTACAGGTACACCGGCGGATGAAACACGATAACCAAGATGTGCTGTTCCAGTGCAACGACTGCAAATCTACCTTCCCTAACAGTTGGAGTGTGGCGTACCATAGGAAAAAAGTTCACGGGAAAAGTGCGGGTGACGACGGAATaactaaaataaagaaagaagGCTATGGAATACCCTGTCGAGACTGCGACCAACTATTGGCGAATAAAAACGCACTTTATAAGCACAGGCTGAAAGAACATTCCGATCAATCACTTGGCGAAATCAACACGTTGTTATCAGAGGAGAAGTGTATGACTTGCGGGAAGTGTGGCCTCCAAGTACAAAAGTTAGGAGATTTGGAAAAACATCTCAGGGAGGTTCATGATGAAGAGCAACAAATGTTCTCGTATGACGCGCACGCGAGCACGCAAGGTGCGGGCGAGCGCCGCTACCGATGCGAATTTTGTGGCGTGTCCTTCAATAGGGCGGCAACAATGCGGAACCACCGTCAGATCCACAGCGGTTTGATCCGTATGAAGTGGTCCTGCGAGCGCTGCCCGCGCCGCTTCAGCGCGCGCGCAGAGCTGCGTGCGCACTTGCGTCTCAAGCACCCCGCGCGCCTCGCCGTCATTGAGATCGAAGGGCTGAATCCATCGCCAGAGGTAGTGCTGAACTATCTGAAAATGAAAAACATTCAACAACGAAATGTTATCGACATCACCATGATTTCATTTGCTCAGGGAACCACAAATATTGTACCCAATTCTGCCAGGGCCTTGTCCTTACTGAATGATGTGCCTCGAACACACATAGCTCGAGAGGATTCTACGTTTCCTCGCGGACACGGTATCATGCAGGCACCGCGTCCCGACACCAGCAGCACTTATAGCAATAACTGGCCAAGTATTATCCGTCCAAACACAGGAACAGTGCAAGACTATTTCTCTATTCGGTCTACAAATGATTTTGCAAACTTTGATGATCTTTCACAGAACATGTCACCGGAACTGTTACTTCAAGATGGCGGCATAGATAACAGAAATCAAGAGGTTCAAATAAATCCAGGTGACGCTGCTGCTAGAATAACATAA
Protein Sequence: MSDDIQPLIVCMENNDGEKVSLRINPTDSFQTFLDNAKALLGYDIDLDSVTNNQPVSLEDNIYTFLLNMEDDTHNRKEDPLKCYELEYVLGDGTQIESSQIQFDNEDTIIDLSAVHIPFVKFVEGSSEDEINFSEKITPVNYVIPESPQSMRSSTPTSEFVNSLPFKLHCSNASHFERYYNKYLELSMNTSTVFNAIDKKSKNDFKLRCNTTATNQNKFMTRDDILNIFKDSPVNSLPCEESKNSNHEKRKHVRKTDPLGQVKKNSSNKVEAEPDQSAKNYECCICDKIISNIMEKSYIFDKEDQMIHRTEQRKTVTHLKILCTQCLCNHFQPSIMKSPSQSLNNDEYLVIQNNQQFIFQKTTPIVLKKISIDLNTILSNGKNIENSKVQQEINKEITSSFKGNAKEPADVIVDTDIKFSDAIEIIEPDIDCDNIDKIEDEVVMEFLGKNEKCDMKDKELICRFCDKAFENISQVVDHGDEHKHDLDDGPLYPCPLCDYGYAKNKWLKCHIKAVHHKVEDKPLIKEEEENKETLSREPSPVAKRTRSSIKKSVQEIDIGCNEKATQEVKSIDEAKSPLVLITEVKQEILDSSDEEAIWILQAEAEAQGNQNKQTSDKVDVKTGEKSDKEPKCNKCLQILSSAEAVKAHKCRKRERKRNAKVDSVKKPQKKKGKSSTEPRIVTCDICDESFSSKVRLKFHMQFHEPSANITADGEYLCSECDGATFPSETELFDHVHFQHKKKKRWQCPTEGCGKTFFLRTTLTKHIRTHTDTRRYVCVTCGKRFLNKQTLDEHSVTHLQIKPFSCHICLKQLTRRSRLRMHLRSHEEEPSPRLVLACAVCRRAFATAAEATEHVTMSTECLELFALEVKKETETEELSPTTGIVTQYSENKSSVNDPIEREVNTSESAALLEAVDDVARAIVRVVNIEKAFRCEYCEDVFYLEDALNKHRTIHKGVKNPFICHICKVSFATYSRCTTHKTTHGFYKRKEKDVATNNAGPNAGILGYGGFPVAKHFLCEDCGRSYLHWTYLQVHRRMKHDNQDVLFQCNDCKSTFPNSWSVAYHRKKVHGKSAGDDGITKIKKEGYGIPCRDCDQLLANKNALYKHRLKEHSDQSLGEINTLLSEEKCMTCGKCGLQVQKLGDLEKHLREVHDEEQQMFSYDAHASTQGAGERRYRCEFCGVSFNRAATMRNHRQIHSGLIRMKWSCERCPRRFSARAELRAHLRLKHPARLAVIEIEGLNPSPEVVLNYLKMKNIQQRNVIDITMISFAQGTTNIVPNSARALSLLNDVPRTHIAREDSTFPRGHGIMQAPRPDTSSTYSNNWPSIIRPNTGTVQDYFSIRSTNDFANFDDLSQNMSPELLLQDGGIDNRNQEVQINPGDAAARIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00934179;
90% Identity: iTF_00934179;
80% Identity: -