Basic Information

Insect: Lysandra bellargus
Gene Symbol: -
Assembly: GCA_905333045.1
Location: HG995326.1:5468841-5486386[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.27 22 6.4 0.1 2 23 468 489 467 489 0.87

2 15 0.065 5.3 8.4 1.3 1 23 499 522 499 523 0.94

3 15 0.0041 0.33 12.1 0.6 2 23 689 710 688 710 0.95

4 15 5.3 4.4e+02 2.3 0.6 1 23 722 746 722 746 0.87

5 15 3e-05 0.0025 18.8 0.4 2 23 753 776 752 776 0.97

6 15 0.067 5.5 8.3 0.5 1 23 782 804 782 804 0.94

7 15 0.0036 0.29 12.3 4.2 1 23 810 832 810 832 0.98

8 15 0.024 1.9 9.7 0.4 1 23 944 966 944 966 0.97

9 15 2.7 2.2e+02 3.3 6.2 1 23 973 995 973 995 0.95

10 15 0.0015 0.12 13.5 1.8 1 23 1028 1051 1028 1051 0.95

11 15 0.0051 0.42 11.8 0.8 1 23 1058 1081 1058 1081 0.97

12 15 0.16 13 7.2 0.2 2 23 1101 1123 1100 1123 0.95

13 15 0.063 5.1 8.4 0.1 2 23 1142 1164 1141 1164 0.95

14 15 7.6e-05 0.0062 17.6 0.6 1 23 1187 1209 1187 1209 0.98

15 15 0.0028 0.23 12.6 0.8 2 23 1219 1241 1218 1241 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.27	22	6.4	0.1	2	23	468	489	467	489	0.87
2	15	0.065	5.3	8.4	1.3	1	23	499	522	499	523	0.94
3	15	0.0041	0.33	12.1	0.6	2	23	689	710	688	710	0.95
4	15	5.3	4.4e+02	2.3	0.6	1	23	722	746	722	746	0.87
5	15	3e-05	0.0025	18.8	0.4	2	23	753	776	752	776	0.97
6	15	0.067	5.5	8.3	0.5	1	23	782	804	782	804	0.94
7	15	0.0036	0.29	12.3	4.2	1	23	810	832	810	832	0.98
8	15	0.024	1.9	9.7	0.4	1	23	944	966	944	966	0.97
9	15	2.7	2.2e+02	3.3	6.2	1	23	973	995	973	995	0.95
10	15	0.0015	0.12	13.5	1.8	1	23	1028	1051	1028	1051	0.95
11	15	0.0051	0.42	11.8	0.8	1	23	1058	1081	1058	1081	0.97
12	15	0.16	13	7.2	0.2	2	23	1101	1123	1100	1123	0.95
13	15	0.063	5.1	8.4	0.1	2	23	1142	1164	1141	1164	0.95
14	15	7.6e-05	0.0062	17.6	0.6	1	23	1187	1209	1187	1209	0.98
15	15	0.0028	0.23	12.6	0.8	2	23	1219	1241	1218	1241	0.95

Sequence Information

Coding Sequence: ATGTCGGACGACATTCAACCACTCATTGTATGCATGGAAAACAATGATGGAGAAAAAGTTTCCCTAAGAATTAATCCTACCGATAGTTTTCAAACATTTTTAGATAATGCGAAGGCACTATTAGGCTACGATATTGATTTAGATTCAGTTACCAATAACCAACCAGTATCACTCGAGGACAATATTTATAATTTTCTGTTAAATATGGAAGACGATACACACAATAAAAAAGAAGATACGTTTAAGTGTTATGAATTAGAATACGTATTAGGCGATGGGACACAAATTGAAGCATCACAAATACAATTTGATAATGAAGACACAATAATAGATTTCAACGCTGTACAGATTCCATTTGTTAAATACGTGGAAGGATCCAGCGAAGATGAAATCAATTTTTCAGAAGAAAAGATCAGATCAGATCAGAGAGAAACAGTAAACTACGTTATCCCTGAAAGTCCGCAGTCAATGCGTTCTTCTACTCCCACATCTGAATTTGTTAATAGCCTCCCGTTTAAAATTCATTGCAGTAACGCTTCACATTTTGAAATGTATTTTAACAAATACTTGGAGCTAAGCATGAATACTTCTACTGTTTTCAACGCTATTGATCAAAATACCAAAAATGATTTTAAATTAAAATGCAATACAACGGCGACAAATCAAAACAAATTTATGACTAGAGACGATATACTTAACATATTTAAAGATTCTCCTGTTAATTCCATTCCGTACGAAGAGAGTAGAAATAGTAACCACGAAAAGCGCAAGAATGTAAGAAAAACTGATCCACTGGGACAAGTAAAAAAGAATTCCAGTAATAAAGTAGAAGCTGAACCAGACCTAAGTGCGAAAAATTACGAATGTTGTATATGTGACAAAATCATAAGCAATATAATGGAAAAATCATATATATTTGATAAAGAAGATCAAATGATTCATCGAACAGAACAAAGAAAAACTGTAACCCATTTGAAAATTTTGTGCACACAATGTTTATGTAATCATTTTCAACCGAGCATCATGAAAAGTCCAAGCCAATCATTAAATAACGACGAATATTTAGTAATACAAAATAATCAACAATTTATATTTCAAAAGACCACGCCGATTGTTTTAAAAAAGATAAGTATCGATTTGAATACAATTTTAAGCAATGAAAAAAATATAGAGAATTCTAAAGTCCAACAGAAGATTAATAACGAAATAACATCAAGTTTCAAAGGAAATGCAAAAGAACCCGATGATGCTGTGATCGTTGATACTGATAATAAATTTTTTAATGATATTGAAATAATTGAACCAGACATTGACTATGACAATATTGATAAAATAGAGGACGAAGTTGTTATGGAGTTTTTAGGTAAAAATGAAAAGTGTGTTATGAAGAATAAGAAATTAATATGCAGATTTTGCGATAAAGCGTTTGAGAACATTTCTCAAGTGGCCGATCATGGAGATGAACACAAACATGAGTTAGATGACGGAACTCTTTATCCTTGTCCACTTTGTGACTATGGGTATGCTAAAAATAAGTGGCTCAAATGTCATATCAAAGCTGTTCATCATAAAGTTGAAGATAAGCCTCTTATTAAAGAAGAAGAAAATAAAGAGACTCTATCACGTGAACCATCGCCAGTGGCTAAAAGAACAAGAAGTTCAATTAAGAAAAGTGACCAAGAAATTGTTACAGGTTATAAATTAATATTAGATTTGATACTTACGTCTTATGAAGAATTTGCTAAGTCTCCGCTGGTTTTGATAACGGAGGTGAAACAGGAGATCTTGGATAGCAGTGATGAGGAGGCGATATGGATTGTTCAGGCGGAAGCCGAGGCACAAGGAAACCAGAAGAAACAAGCATCTGATAAAGTTGACGTCAAAACTAGAGAAAAGTCCGACAAAGAGCCAAAGTGTAACAAGTGTTTACAAATACTCAGTTCGGTGGAGGCTGTAAAGGCTCACAAATGTAGAAAGCGAGAAAGAAAAAGAAATGCAAAGGTAGAGTCCGTAAAGAAACCTCAAAAGAAGAAGGGCAAGAGTTCAACAGAGCCCCGAATAGTAACATGCGATATCTGTGATGAGTCATTTAGTTCCAAAGTGAGACTAACATTTCACATGCAATTCCACGAGCCTAGCGCCAATATAACTGCAGACGGGGAGTACCTATGCTCAGAATGTGACGGCGCGACGTTCCCGAGCGAGACGGAACTATTCGACCACGTACACTTTAAACACAAGAAGAAGAAACGTTGGCAGTGCCCAACGGAGGGCTGCGGAAAAACTTTCTTTATGCGGCCTACGCTGACGAAGCACCTTCGCACGCACACCGACACGCGCCGCTATGTGTGCGTCACGTGCGGCAAGCGGTTCCTCAACAAACAGACGCTAGACGAGCATAGTGTTACACATCTTCAGATCAAGCCTTTTTCGTGCCACATTTGCCTGAAGCAGCTGACGCGGCGGTCGCGGCTGCGCATGCACCTGCGCTCGCACGAGGAGGAACCTTCGCCGCGGCTCGTGCTCGCCTGCGCCGTCTGCCGCCGCGCCTTCGCCGCAGCCGCTGAAGCTACGGAGCACGTAACAATGTCGACTGAGTGCTTGGAACTTTTCGCGCTAGAAGTAAAGAAGGAGACCGAAACAGAAGAACTGTCTCCTACTACCGGCATCGTGACGCAAAATTCTGAGAATAATATCCGAAACTTTTCAGAGAGTTCTGTCAATGATCCAATAGAGCGTGAGGTGAACACAAGCGAGAGCACCGCGCTGCTTGAGGCAGTGGGTGATGAGGCGAGGACCATAGTGCGTGTTGTGAACATAGAGAAGGCGTTCCGATGCGAATACTGCGAGGATGTTTTCTACTTGGAAGACGCTTTGAACAAGCACAGGACAATACATAAAGGAGTTAAAAATCCTTTTATCTGCCATATATGCAAAGTTAGTTTTGCGACGTACTCCAGATGTACTACCCACAAGACGACTCACGGGTTCTACAAGCGCAAGGAGAAGGATATTGCTACCAATAACGCCGGACCTAACGCCGGCATACTCGGCTACGGGGGATTCCCCGTGGCCAAACACTTTTTATGCGAGGACTGTGGGCGCTCGTACCTGCACTGGACGTACTTACAGGTACACCGGCGGATGAAACACGACAACCAAGATGTGCTGTTCCAGTGCAACGACTGCAAATCCACCTTCCCTAACAGTTGGAGTGTGGCGTACCATAGGAAAAAAGTTCACGGGAAAAGTGCGGGCGACGACGGAATAACTAAAATAAAGAAAGAAGACTATGGAATACCCTGTCGAGACTGCGACCAACTATTGGCGAATAAAAACGCACTTTATAAGCACAGGCTGAAGGAACATTCCGATCAATCACTTGGCGAAATCAATACGTTGTTATCAGAGGAGAAGTGTATGACTTGCGGGAAGTGTGGCCTCCAAGTACAAAAGTTAGGAGATTTGGAAAAACATCTCAGGGAGGTTCATGATGAAGAGCAACTAATGTTCTCGTATGACGCACACGCGAGCACGCAAGGTGCGGGCGAGCGCCGCTACCGATGCGAATTTTGTGGCGTGTCCTTCAATAGGGCGGCAACAATGCGCAACCACCGTCAGATCCACAGCGGTTTGATCCGTTATATGAAGTGGTCCTGCGAGCGCTGCCCGCACCGCTTCAGCGCGCGCGCCGAGCTGCGTGCGCACTTGCGTCTCAAGCACCCCGAGCGCCTCGCCGCGGCCGTCTTTGAGATCGAAGGGCTGAATCCATCACCTGAGGTAGTGCTGAACTATCTGAAAATGAAAAACATTCAACAACGAAATGTTATCGATATCACCATGATTTCATTTGCTCAGGGAACCACAAATATTGTACCCAATTCTGCCAGAGCCTTGTCCTTATTGAATGACGTGCCGCGAACACACATAGCTCGAGAGGATTCTACGTTTCCTCGCGGACACGGCCGCGGTATATTGCGGCTAGTGGACGATGTACCCGATGAGGCGATGCTGGCTGGCGCGGTGCGGAGGGGCGGAGAGTGA
Protein Sequence: MSDDIQPLIVCMENNDGEKVSLRINPTDSFQTFLDNAKALLGYDIDLDSVTNNQPVSLEDNIYNFLLNMEDDTHNKKEDTFKCYELEYVLGDGTQIEASQIQFDNEDTIIDFNAVQIPFVKYVEGSSEDEINFSEEKIRSDQRETVNYVIPESPQSMRSSTPTSEFVNSLPFKIHCSNASHFEMYFNKYLELSMNTSTVFNAIDQNTKNDFKLKCNTTATNQNKFMTRDDILNIFKDSPVNSIPYEESRNSNHEKRKNVRKTDPLGQVKKNSSNKVEAEPDLSAKNYECCICDKIISNIMEKSYIFDKEDQMIHRTEQRKTVTHLKILCTQCLCNHFQPSIMKSPSQSLNNDEYLVIQNNQQFIFQKTTPIVLKKISIDLNTILSNEKNIENSKVQQKINNEITSSFKGNAKEPDDAVIVDTDNKFFNDIEIIEPDIDYDNIDKIEDEVVMEFLGKNEKCVMKNKKLICRFCDKAFENISQVADHGDEHKHELDDGTLYPCPLCDYGYAKNKWLKCHIKAVHHKVEDKPLIKEEENKETLSREPSPVAKRTRSSIKKSDQEIVTGYKLILDLILTSYEEFAKSPLVLITEVKQEILDSSDEEAIWIVQAEAEAQGNQKKQASDKVDVKTREKSDKEPKCNKCLQILSSVEAVKAHKCRKRERKRNAKVESVKKPQKKKGKSSTEPRIVTCDICDESFSSKVRLTFHMQFHEPSANITADGEYLCSECDGATFPSETELFDHVHFKHKKKKRWQCPTEGCGKTFFMRPTLTKHLRTHTDTRRYVCVTCGKRFLNKQTLDEHSVTHLQIKPFSCHICLKQLTRRSRLRMHLRSHEEEPSPRLVLACAVCRRAFAAAAEATEHVTMSTECLELFALEVKKETETEELSPTTGIVTQNSENNIRNFSESSVNDPIEREVNTSESTALLEAVGDEARTIVRVVNIEKAFRCEYCEDVFYLEDALNKHRTIHKGVKNPFICHICKVSFATYSRCTTHKTTHGFYKRKEKDIATNNAGPNAGILGYGGFPVAKHFLCEDCGRSYLHWTYLQVHRRMKHDNQDVLFQCNDCKSTFPNSWSVAYHRKKVHGKSAGDDGITKIKKEDYGIPCRDCDQLLANKNALYKHRLKEHSDQSLGEINTLLSEEKCMTCGKCGLQVQKLGDLEKHLREVHDEEQLMFSYDAHASTQGAGERRYRCEFCGVSFNRAATMRNHRQIHSGLIRYMKWSCERCPHRFSARAELRAHLRLKHPERLAAAVFEIEGLNPSPEVVLNYLKMKNIQQRNVIDITMISFAQGTTNIVPNSARALSLLNDVPRTHIAREDSTFPRGHGRGILRLVDDVPDEAMLAGAVRRGGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01248475;
90% Identity: iTF_01248475;
80% Identity: -