Piph016281.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polyommatus iphigenia
Gene Symbol
-
Assembly
GCA_963422495.1
Location
OY730183.1:14535995-14550768[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.022 2.1 10.0 0.6 3 23 746 767 745 767 0.90
2 22 0.6 57 5.5 0.2 1 21 1129 1149 1129 1150 0.96
3 22 8.2 7.8e+02 1.9 0.3 1 22 1192 1213 1192 1215 0.82
4 22 0.069 6.6 8.4 0.8 3 21 1226 1244 1224 1245 0.94
5 22 0.35 34 6.2 0.0 3 23 1254 1275 1252 1275 0.89
6 22 0.15 14 7.4 0.1 3 23 1295 1316 1293 1316 0.96
7 22 0.0069 0.65 11.6 1.7 1 23 1322 1345 1322 1345 0.95
8 22 0.11 10 7.8 0.0 1 23 1368 1391 1368 1391 0.90
9 22 0.023 2.2 9.9 3.4 1 23 1396 1418 1396 1418 0.97
10 22 0.0052 0.49 12.0 0.0 1 23 1424 1447 1424 1447 0.96
11 22 0.0019 0.18 13.3 1.9 1 23 1464 1486 1464 1486 0.98
12 22 0.00022 0.021 16.3 1.8 1 23 1531 1554 1531 1554 0.97
13 22 0.0004 0.038 15.5 1.2 1 23 1622 1645 1622 1645 0.95
14 22 0.0054 0.51 11.9 1.4 2 23 1670 1692 1669 1692 0.95
15 22 0.57 54 5.5 0.1 2 23 1698 1720 1697 1720 0.93
16 22 0.045 4.3 9.0 0.2 1 21 1756 1776 1756 1777 0.94
17 22 0.0064 0.61 11.7 0.1 1 23 1787 1809 1787 1809 0.93
18 22 0.00011 0.01 17.2 0.3 2 23 1900 1922 1900 1922 0.93
19 22 2.2e-07 2.1e-05 25.7 1.0 3 23 1929 1949 1928 1949 0.98
20 22 0.33 32 6.3 0.0 1 23 1992 2014 1992 2014 0.97
21 22 0.03 2.9 9.5 0.6 1 23 2020 2043 2020 2043 0.95
22 22 0.00023 0.022 16.2 0.8 1 23 2051 2074 2051 2074 0.97

Sequence Information

Coding Sequence
ATGAGTGTGGATTATGATAGTGTTTGTAGACTTTGCTTAGCATCCGAACGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCCCTCGTCCTCGCTTCGAAAATCAAAGATTGCGTGTCCATACAGATCGAGGAGAATGACGATCTACCGAGTAATATTTGCAAGAAATGCAATGATAATGTTAGTAACTGGGAGATATTCAAGGGAGTTTGTGAAAGATCACAAAATAAGCTTCTACAATTGAGCAACAAAAAGGGCAGCAGCCAACTGGAAGAGTTGAATGTAAAAAGAGAGCGGTATGCAGATGAAGCCTATGACGATGGAGTGGTCATAGATGGCTCATATCCGGAGAGTGAGAGTGCTGAGGGATCAAACAAACTGCAACCCGAAGGTCCACCTATACTTACTTCTTTGGGATTGACACCGAGGAGTGATAAGAAATATGTAGATCCCAGAATGGACTGGCAACGAGTCCATGCGATATTGGACATAGTTCAAGAAGATGAGGTCATTGACTCTTTACAAATGAGAGAGGAGTGTGATGTAGTCCATCAATCGGAACACGACTCCGACACTGATATTGAACTCAATGAGGATATAAAGCAGGAGTATCTGGAATTCAAAAAAGGATATGTTTGCAGAAATAAGAAGATACTGTCCAAGAATCCGAAACTGTTATCCTCCCATAATATAGCTAGGGCTCGTAAAGTGATCAGCTTGAGAAAGAAACAAACTGTGTTGCCGCACAAGTATTATTCTATGCCCCAGCAAACGTGGCAGCTGTTCATTTCGGATGATCTTTTGGAGCTCATTGTGGCTGCGACTAATGCTAAAATGGAGATGAGCGAGTCGAGATACTTTCCAACAAAGATTCGTGAAATAAAAACACTCATAGGTATACTGTACTACCACGGGATAGTGAGAGCAACACACCAAAAGTGTAGTGACCTCTGGAGTCATGAGTTCGGAGCGCCCTGCGTGCAGGGGGCTATGAAGTATGAGCGGTTTAAGACTTTGCTCCAAAACTTGAGCTTtgaaaaaaaggaaaatgaaaCTATTATGGAGCTAGATGTCATGAAACAGATGCGTCAAGTGTTCGAAATATTCGCGTTAAACTGTCGAACTTCTTTTGCAGTCGGTAACACTGTTGTGATTGATGAAGTTATGGTGCCAGTGTACGGACCTTGCCCCTTCCGATACCAGATCAAAAAAAAGGAGCTGAGCTCTGGAATCAAAATAGTACTCGTAGTGGATCCCTCTAacttttatataacaaatttggATGTAATAACGGATCCTTATTTTGGAAGTGACGACATTGCAATGAAGCTGCTACAGCATTTGGCCGGTACTTACAAGACTGTCGTCATGGACAGTTGGTTTTCATCTTCAACATTAGTGGATAAGTTACTGAATGAATATAAACTATTCTCACTGGCTGCTGTAAATGAGAAGAATGAACTCATGCCCCCTCTCTTTGTATCTCATCATAGAAAAAATAGAGTTCTCTTGAATGGTTTTCTTGACGAACATGTACTTCTTATGTCCCTTATCGATTCTGATCTCAAGACTGTCAACATATTGACCAATGAACCTAAACACTACAAAAAGAGCAATGTTAACTCCATTACACCGATTTCATTGTACAAGAAACATCAATCGGCTGTGCAAGTCGTAGACGTTCTTATGCACTATTATACAACCATGCAGCACACTAATGATTGGACTCTGTCCATATTTTTCATGTTGCTTAACATTGCCTCTGTAAATGCTCAAGTTATGTGGACTTCTCAGTCACCGAATACGAGTCTGAAGCGTCGCTTCTTCATTAGAGAGTTGGCCCTGAGTCTCATGGATTCACAGTACGAACCCCTACTTGCGGAGTTTAATATTGGTTCTAAGAGAAGAAAGTTGAGTATGGAACATTTGACCCCCTCATACAAGAACAGAAGACGCTGCAAGCCCTGCCATTCGATGCACAAACGAGACAGACGGACTAAGACATTCTGTATTAGATGCGGTGGTGTGGACAGCGACAAGGACGATTACGAGGACGGTGACGACCAGGACGAGCCCGCTGATGATGACGAGGAGGAGGTGAAGAGGCGGAAACCGTACTCCGACATACCCAACATGCCCGAAGTTTCCATCACAGTCATGCGGCCCACGGGGGAGACGCTGCACGCGAGGCAGGGGATCCAGCAGCTCGCCTCCAAGGACTGCCTCGTCTGCGGCCGCAGCTACAGGTACTCCCACAACGCCCGCCGGCACGAGCTAGGAGCGCACAACTTCGACCGATACACCAACAACCACCTCGCCAGGAAGTCCACCATGCAGCCCAAGCTCCGACCCAACCCCTTCAACCCCAAGGCGCGACTCATGCCCAACCCCATCAGCCACAAAATTCAGTACATGAACATAAGCATGGGCAAGCCCCTGCAGAGGAAGATCGCGCCCCAGAAAATGGTCGCCTGCCCGAAACCGATCCCGATAAAGAACGCCAAATCGAACCAAACTAATCTGCCGTACCCGCTCCGCATCAAGGCGCTGAAGGACCTCCAGATTAAAAAGAAGGAGCCCCAAATCCTGAAGACGCTTCTGACGTCGAAACCGGAGGTTCTGGTGTCGGAACCGGAAATAATGAATTCCGGCCCCGAGAGTCCGGAGACGCTGATATCCGAGCCGGAGATAGCGTCGTTCGCGGTCGAGACGATCCTGTCCGAGCCGGACGGGGACGCCCAACAGGACGACGACTACGACGGCGAGGAACGGAACAAGCGAGGAAACTACGACACCGTGGACATGGACTCCGAGAACGAGATAGAGATAGCGCGGCAGCGGCCCGACGACCACTACGACGGGGAGCAGAAGGAGGGCGACAAGGAGGAGTTCAATGAGAACGACGACTCCGACAAAAACAGCGCGGGCGACAACGCGGCCGACACCACCGAGACCAAACACGAGCAGGACGGCGGCGAAGGCGGCGAGAAGGCCGACGACGAGATGATAGAGAACAACCAGGAAGCcaacgacgacgacgacgaggACGAGGAGATGCCCCCCATCGCGCCCGTCGTCGAGATCAACGAGGAGGTCAACAGCTCCTACAACAACGACGACAACGACAACGACGACGACTACCTCGACGACACCGTCGACCCCGCCGACGCCGCCGACCTCGACACAACCCCCAAGGTGCTCGACCCCGACAAGGTCTACGTCACGAAGACCCAGAGAGATTTTATAGTCAAATATCGCGATATAATTCAGCAGATCAACACGATGACCTGCCTCTGCTGCAACAGGGAGCACCCTCGGCGGAAGGCGGTCATCCAGCACCTCCAGAAGAACGGCCACAAGGTCCCCAAGCACACCTGCTACAACTGCGTCGTCACGTTCGGCCACATCGGCGCCCTGCTCAGCCACATGCGGGCCAACCGCTGCACCGACCTGTGGAAGATCATCTACGACGAGAACGGCATAACCGACGACCGCGTGATCGAGGACGAGCCGAAGGACAGCAAGGTCGCGTACAAGGACATCTTCAACGCGAGGTCGTACGCCTGCAAGCTCTGCCCGGCCAAGTTCCAGCTGAAGCAGTTCATCATGAAGCACGTCCTGGACGTCCACGAGGACGGGCAGTCGCGCGTGCAGCTGGCGTGCGTGCACTGCCGCTCGCGGTTCAAGGACAAGgcgCTGTGGAAGAAGCACATCCGCAACGGCGAGTGCACCGTGTACATCGCGTGCGACCTGTGCCCGGAGACCTTCATCACCGTGCAGGAGTTCAACGACCACGCGCTCGCCGTCCACGCCGGCCACTTCGACCCCGACAGCCAGAACAAGTGCGTCGACGGCCGCCCCACAGACTGCCCCCTCTGCGGGAAGAAGAACAGCGGTTACCCCAACCTCGTGAAGCACCTCAAGATCATCCACGACGAGGAGCGGCCGCACTACTGCCGGCACTGCGACGCCAAGTTCAAGGAGGCCGGCGACCTCAACGAGCACATCTACATGGAGCACTCCGACCGCTCCGGCCGCGCCGAGCCCGACGCGGCCGTCGTCAAGGAGGAGGCGGAGGAGTACCACTACTCGTGCACCGAGTGCGACGCGATATTCGAGACCGTCGACGCCTGGACCGACCACCAGGTCGCCGAGCACGACCAGATCGCGCACCACTGCGACCAGTGCGAGAAGAAGTTCCTTCGGCCGTCCGAGCTCGCCGAGCACAAGAACACGCACCTGCGCGTCAAGTTCTACCCGTGCTCGATCTGCGCCAACTCGTACAGCACCGCCTCCCAGCTCGCCGACCACGCGCAGCGGGCGCACGCCggcgccgcccccgccgccgccgccgccgcccccggCGAGAACGTGTTCCACTGCGACGTCTGCGTGCGCGGCTTCAAAAGCCGCCAGGCCTACTCCAACCACATGCGCATCCACTCGAAGCTCCCCCAGACGAACCGGCGCGGCGACCGGTCGAGCTTCGCCCCGAACATCGTCGGGAAGCCGATCCTCCAGTACCCGCTGATGCAGCTGGGGTTCGGGTCGAGCCTGCCCGTCCCAAACGCGCCCTACTCGTGCGACATCTGCGGCAAGGGCTTCATGCACAAGAAGAACATCTGGAAGCACAAGAAGGTGCTGCACGCCGACCTCGTCGCCGACCGCAACGACAGCGAGGAGAACACCATGCACGCGTCCACCGAGGACGACGAGCACAACGGGGACGAGAACGGCGCGCTCTCGACGCCGCAGTTCGACAGCTTCGACTTCGGCGGcccgcccgccgccgccccgccccgcgccgccgcgcctcGCGCCGCCCCCCCGCCGCCCGACGCCATGCAGTTCGCGTGCGACCTGTGCTCCAAGCGGTTCCCCCAGCGCACGAGCCTGTGGAAGCACAAGCGCGCGAAGCACGGCATCATCAACGCCGCCGCCATCGGCACTGCCGACGTCCAGCCCGCCGGCGGCGAGGGCGGCGGCCGCTCCAGCTGCACCATCTGCCGGATCACCTTCGCCGACAAGAAGTCCTACTACCGGCACAGGAAGAACGTGCACAAGTCCACCGTGCAGATGTGCAAGCTGTGCGGGCGGGCGCTCAACTCGACGCTCGAGCTGTACGAGCACCTCAAGGCGGCGCACTCCCGCGAGCTGCTCGGCGacaccgcgccgccgcccgccgccgagCGCGACGACGACGAGGCGGAGGACGAAGGCGAGCCCGCGCGCGCCGACTACCAGGCCCACTACACCTGCGACGCCTGCGGCAAGCGCTTCGTCGGCCTGCTCGCGCTGCAGAACCACCGCTGCGTCTCGGCCGTGCAGAACCAGCCGCAGACGTTCGACTGCGAGATCTGCCAAAAGAGCTACGTCTCCATCGCGGCGCTCAAGAGCCACCGCGGCTGGCACCTGCGCTCGCCGGACGGCAAGGCGGCCGCCACCAACTCGGGCCTGTGGATGCCGCACAACAAGGTCACCAGCAAGGTGAGCAAGTCCGAGGTGGTGGACGGgggggcgcggggggcgggcTCGCCGGCCGGCCCCGCCGCGCTCGCCAAGCGCCGCCTGCCACCCGAGGTCGAGGTCACCGTCGTCAACCCCAACAAGCGCATGCGGCCCGACGACGCCGCCGAGCCCCCCGCGCCCGCCATGTGCGGCGCGCCCGGCGGCGACGACCGCTACTGCAACATATGCGACAAGGAGTTCACCAAGCGCGCCGCGTACCAGCGGCACATGGACGAGGTGCACCAGCCCAACTCGGTGTTCTGCCCCGTGTGCGACCGCAGCTTCACGCGCAAGTCGACGCTCATCGTGCACATGAGGAAGCACTACGAGGTGGAGGGTGGCGCGGGGGGCGGGGAGGAGGAGGACGACGGGGAGCCGGCGCACCGCGAGCACGACGACGAGTCCGGCGAGTCGGGGGAGGAGGGGGGGCGCGCACCGCCGCCGGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCAGCCCGCGCGACCTGATCGCGCACCGCGCCATGCACGCGACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTGTACTTCGCGCGGGCGCTCGACCTGTCCACGCACACGCGCGCGCGCCACGCCGACAACGACAAGGTGTTCTTCCCGTGCGCGATGTGCGACCGCTTCTACATGAACAAGAAGAGCCTGCAGCGGCACATCGAGACCTCGCACTGA
Protein Sequence
MSVDYDSVCRLCLASERELLPIFPTTSSDDSEPLVLASKIKDCVSIQIEENDDLPSNICKKCNDNVSNWEIFKGVCERSQNKLLQLSNKKGSSQLEELNVKRERYADEAYDDGVVIDGSYPESESAEGSNKLQPEGPPILTSLGLTPRSDKKYVDPRMDWQRVHAILDIVQEDEVIDSLQMREECDVVHQSEHDSDTDIELNEDIKQEYLEFKKGYVCRNKKILSKNPKLLSSHNIARARKVISLRKKQTVLPHKYYSMPQQTWQLFISDDLLELIVAATNAKMEMSESRYFPTKIREIKTLIGILYYHGIVRATHQKCSDLWSHEFGAPCVQGAMKYERFKTLLQNLSFEKKENETIMELDVMKQMRQVFEIFALNCRTSFAVGNTVVIDEVMVPVYGPCPFRYQIKKKELSSGIKIVLVVDPSNFYITNLDVITDPYFGSDDIAMKLLQHLAGTYKTVVMDSWFSSSTLVDKLLNEYKLFSLAAVNEKNELMPPLFVSHHRKNRVLLNGFLDEHVLLMSLIDSDLKTVNILTNEPKHYKKSNVNSITPISLYKKHQSAVQVVDVLMHYYTTMQHTNDWTLSIFFMLLNIASVNAQVMWTSQSPNTSLKRRFFIRELALSLMDSQYEPLLAEFNIGSKRRKLSMEHLTPSYKNRRRCKPCHSMHKRDRRTKTFCIRCGGVDSDKDDYEDGDDQDEPADDDEEEVKRRKPYSDIPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELGAHNFDRYTNNHLARKSTMQPKLRPNPFNPKARLMPNPISHKIQYMNISMGKPLQRKIAPQKMVACPKPIPIKNAKSNQTNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFAVETILSEPDGDAQQDDDYDGEERNKRGNYDTVDMDSENEIEIARQRPDDHYDGEQKEGDKEEFNENDDSDKNSAGDNAADTTETKHEQDGGEGGEKADDEMIENNQEANDDDDEDEEMPPIAPVVEINEEVNSSYNNDDNDNDDDYLDDTVDPADAADLDTTPKVLDPDKVYVTKTQRDFIVKYRDIIQQINTMTCLCCNREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANRCTDLWKIIYDENGITDDRVIEDEPKDSKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLACVHCRSRFKDKALWKKHIRNGECTVYIACDLCPETFITVQEFNDHALAVHAGHFDPDSQNKCVDGRPTDCPLCGKKNSGYPNLVKHLKIIHDEERPHYCRHCDAKFKEAGDLNEHIYMEHSDRSGRAEPDAAVVKEEAEEYHYSCTECDAIFETVDAWTDHQVAEHDQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICANSYSTASQLADHAQRAHAGAAPAAAAAAPGENVFHCDVCVRGFKSRQAYSNHMRIHSKLPQTNRRGDRSSFAPNIVGKPILQYPLMQLGFGSSLPVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVADRNDSEENTMHASTEDDEHNGDENGALSTPQFDSFDFGGPPAAAPPRAAAPRAAPPPPDAMQFACDLCSKRFPQRTSLWKHKRAKHGIINAAAIGTADVQPAGGEGGGRSSCTICRITFADKKSYYRHRKNVHKSTVQMCKLCGRALNSTLELYEHLKAAHSRELLGDTAPPPAAERDDDEAEDEGEPARADYQAHYTCDACGKRFVGLLALQNHRCVSAVQNQPQTFDCEICQKSYVSIAALKSHRGWHLRSPDGKAAATNSGLWMPHNKVTSKVSKSEVVDGGARGAGSPAGPAALAKRRLPPEVEVTVVNPNKRMRPDDAAEPPAPAMCGAPGGDDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLIVHMRKHYEVEGGAGGGEEEDDGEPAHREHDDESGESGEEGGRAPPPGEFTCAQCGDGVASPRDLIAHRAMHATPTKFFCNICKVYFARALDLSTHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIETSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00406079;
90% Identity
-
80% Identity
-