Piph027965.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polyommatus iphigenia
Gene Symbol
Gzf1
Assembly
GCA_963422495.1
Location
OY730188.1:12221317-12232971[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.89 1.7e+03 0.1 3.9 18 29 127 138 115 155 0.78
2 22 3.6 6.9e+03 -1.8 0.5 16 23 180 187 163 192 0.83
3 22 0.00081 1.6 9.8 0.4 18 41 210 242 199 245 0.78
4 22 0.00064 1.3 10.2 0.4 17 41 250 283 235 286 0.75
5 22 0.00052 1 10.4 0.2 17 41 291 324 276 327 0.75
6 22 2.2 4.3e+03 -1.2 0.1 19 40 334 364 329 368 0.66
7 22 0.0007 1.4 10.0 0.6 17 41 373 406 358 409 0.75
8 22 0.00065 1.3 10.1 0.4 17 41 414 447 399 450 0.75
9 22 0.00068 1.3 10.1 0.5 17 41 455 488 440 491 0.75
10 22 0.00015 0.29 12.2 1.3 17 41 496 529 483 532 0.75
11 22 0.00074 1.4 10.0 0.6 17 41 537 570 524 573 0.75
12 22 0.00058 1.1 10.3 0.2 17 41 578 611 565 614 0.75
13 22 0.00066 1.3 10.1 0.4 17 41 619 652 606 655 0.75
14 22 0.0007 1.4 10.0 0.5 17 41 660 693 647 696 0.75
15 22 0.00078 1.5 9.9 0.6 17 41 701 734 688 737 0.75
16 22 0.00067 1.3 10.1 0.5 17 41 742 775 727 778 0.75
17 22 0.00066 1.3 10.1 0.4 17 41 783 816 770 819 0.75
18 22 0.00066 1.3 10.1 0.5 17 41 824 857 809 860 0.75
19 22 0.0059 11 7.1 1.0 17 39 865 884 852 901 0.74
20 22 0.00059 1.2 10.3 0.3 17 41 906 939 892 942 0.75
21 22 0.00066 1.3 10.1 0.5 17 41 947 980 932 983 0.75
22 22 0.0056 11 7.1 5.6 17 39 988 1007 973 1039 0.86

Sequence Information

Coding Sequence
ATGGCTCGGGCTGTTCGAGCGAGGCAACCACGCTGTGTACGCCCGTCCGCCTCGCTCTCGGTAAAACCGGATGATGGGTTGCCACAAAAGATCTGTAATCAGTGCTCACAGGCCCTAGAACAGGCTATTCAATTTAGAAAAACTAGCAGAAAATCTGAGAAGTCATTAATTAACTATGGACATAGAAGAAAAGAAAACAAATTTGATAAAGTAAAAAAGCCTAAATCAGAGAAAGTAGAAATTGAATTGGAACCTTCCTATGATGATTACCATGATGCCCTTGGAGGCGAGTTCTATGATCGCAGGGACGAGGGAGAAATTGCACAAAACGAGCCAGAGGTTCGGAGGAAGCCTGAGAAAGGCAAGGTGGCACAGTACCGATGCAACAAGTGCAACAAAGATTTTAAGATGAAGGCAACATACAAGGCCCACATGCGCTACCACACCAACTACTGCATGTGTGAGGCCTGCGGAAAAAGATGCAGAAACCACTATCAACTGCAGGAGCACAAACGGGCAAAACATGATCTGGGCAAAATACACAAGTGCACCTACTGCGAGTACAGCTCAGCAACTAAAGAAGCACTCACTATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTTCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGCCCGTACGTGTGCAACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGCCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATTCACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGCCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGCCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGCCCGTACGTGTGCGACCACTGCGGCTCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACGTCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGGCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGCCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGATCCACGAGCGGCGGCACACGGGCGAGCGCCCGTACGTGTGCAACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATACACAACCCCGACAACAACTTCCAGTGCGACATGTGCCCGAAGCGGCTGAAGTCGCGCAAGTTCCTGCAGATCCACAAGCACAACGCGCACACCGGCCGCCGCTACGGATACCTGTGCGGCGCCTGCGGACACCGCTTCGACAAACCCAACAAGgtTCGCGCGCACGCCCGCCGCGTCCACGCGCTGCCCGACGAACGCCAGCCGCCCGTTGTGCGCGTGCAGCTGTAG
Protein Sequence
MARAVRARQPRCVRPSASLSVKPDDGLPQKICNQCSQALEQAIQFRKTSRKSEKSLINYGHRRKENKFDKVKKPKSEKVEIELEPSYDDYHDALGGEFYDRRDEGEIAQNEPEVRRKPEKGKVAQYRCNKCNKDFKMKATYKAHMRYHTNYCMCEACGKRCRNHYQLQEHKRAKHDLGKIHKCTYCEYSSATKEALTIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHFGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCNHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGSTFHRRSNLVQHVAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHNPDNNFQIHERRHTGERPYVCNHCGATFHRRSNLVQHIAIHNPDNNFQCDMCPKRLKSRKFLQIHKHNAHTGRRYGYLCGACGHRFDKPNKVRAHARRVHALPDERQPPVVRVQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01248385;
90% Identity
iTF_01248385;
80% Identity
iTF_01248385;