Piph032498.1
Basic Information
- Insect
- Polyommatus iphigenia
- Gene Symbol
- -
- Assembly
- GCA_963422495.1
- Location
- OY730190.1:13630342-13633320[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-08 2.8e-05 24.7 0.0 1 37 16 53 16 60 0.90 2 2 2.6 1.3e+03 0.2 0.1 20 39 894 913 893 917 0.86
Sequence Information
- Coding Sequence
- ATGCCTGCAAAATATCAGAGGAGCACACTTAGAGCGACCGCCTATACCGAACATGATTTACGAGAAGCTGTGCAAAAAGTTAGAAGTACAGAACTTTCAAACTATGCCGCGTCTAAATTGTACGGGATACCGACATCTACTCTCAACGACCGTGTGTTGGCAAAAACGGGTATTAAAAGCCAAACACTAGGAAGAGCCCCAGCTATTCCTCTAGATCAGGAAACTAAGTTGGCTGAATATTTGCGCACGCTTGAAAAATGGGGTTGGGGTTTATCGAAAGAGGAAGTATTAGATTTAGTGGCAGCGTTTGTACgaagaaataatttaaaaactccGTTCAAAGATGACAGGCCAGGCACCAAGTGGTTCGTGGCTTTTAGAGAGCGACAAAACTTATCAGTGAAGAGACCGCAAGCAGTAGAAGCCGTACGAAAACGAATGACGGATCCATTTTTTATTGACGAATACTTCACACTCTTGAAAGAAGTCCTCACAAAGTACAATATTAAAGATCCACGAAAAATATGGAATCTAGATGAAACATCCGTCTCTCTAGATCCGAGTAGGACAAAAGTTGTTGGTGCCATTGGTCAACCATGTACAAGAACGACTGCTGGTACAGGTAAAGAAAATATTACTGTCTTAACCACAGTTAACGCTGCAGGTGAGAAAATAAATCCTTTAATTGTATTTAAAGGAAAACATGTCTACCAGGAATGGATGTTGGAGGACAAAGGGACATATGAGTTTGAACTTGCTTATGCTGCAAGCAAGCGTGGATGGATGGagacggatattttttataattacatGTCAAATCATGTCATTCCCAATTTAGGCACAGAGAGACCCCAACTGATGGTGTACGACGGCCATGTAACACATGTCGACGAAAAAGTAGTAGCTTTGGCAGCAGAAAATGGTTTGATCATATTAAAACTCCCTGCACACACCTCGCACCTTCTCCAGCCCTTGGATATTGCAGTATTCAAATCCTTTAAAAGTATCTGGGACACACAGCTTGTTATTTGGCAGCGAGAGAATATTGGTGTCAAAGTACGTAAGCAAGCTTTCGCTCGCATGTTTGCAGAAGCATGGCACAAGACAAAACCAGAAGTTATAAGAAACGGCTTCAAAAAGGGAGGGATCTATCCATATAATCCGACCGTCATTCCCAAAGAAAAATTTGAACCTGCTGCTTTTAAAAGATGGCTCAGACACAAAGAAGAAGAAAACGCTGTCTCTAGGAAGATAAATGTTAATACTCTTACAAAACTTTGCACAGATGTCATAAATAAAAGAATGCACATCGACCTAACTGTGCCCACTGTGGATGACGCTGATAAAAATCCTAACGTCATCAAACTAAATGAAGCAAAGACTTTTGAAGAACTTCTATTAGACAAAATTAAACAACAGCCGCAAAATAAAACTGCCACAAAATTAACTCGAGTAGCCAAAGGAGCAGAAGTCATCACACTTACGTATTTAGAAAAGAGGAAAGAATCCGAACAAAAAAGATCGTTTGACAAACCTGTTGATAATGAACAACCCGGGCCATCTCGATTATGCAATAAGAAGACGACTTTAAGTAAAAAAGCAGTAAAAGGAAAGGCTACAGGAAAGAAAACAAGAACTGGAAAAAATAAACTTAGTATTACTAAAAGTTCGGATCATGACCTCAATATTTCTGACGACTCCGACTACGAAAAACCAGAAAAGGAACTAATGAATCTAGGAAAAACACTTCAAGAACCCGCTGATATTGAAAGTACACTTGAAACACTAACTCGAAAAAAGATTTTGTCTAATAAAACAGCAAAAGGAAAGGGTATTGGCAAAAAAACAAAGAGCGCAACGAACAATGTCTGTTCTACTAGTAATCCAGAGCAGAATAACAGTATTTCTGATAACACAGAACAAAATAAGTTGACAAGCACTATCAAAATGGAAACAGATGTAAACAGAATTTCTAACAATAAACTACAAATTAAAACAACCAATAACAAAAGACAACACAATTCTAAGGACAaaacatcaaagaaaaaacgGGCAAAAAAAGTAAAGAGGTCTCGAAGTATAACTTCCACATCTGAAAGTGCTGCAGAACTAAGTTTATGTAGCAACTCTGAAATGGACGACTCCTTCAGTGACATATTTCCTGACAATAATGCATTTTTTAGCTTTGATGGTGAAACAGGTTTATTATCAAGAGAATCACAGATTGAAAAAATTGTTAAAGAAATATATGCAGAAACCGAAGAATACAAAAATGATGACAGTAAAAAAGATAACATATCCGATATAACTGATAACAATAGAaaagaaaacattaaaataaatgaaaccCCACAAGAAAATACACAAGAAGACGAAAAAGAAAACAACATAATAAATGAAACCACGCAAGAAAATACACAGGAAGACGAAAAAGAAAACAACATAATAAATGAAACCCCGCAAGAAAATACACAAGAAGACGAAAAAGAAAACAACATAAAACCAACATCATATAGCACTTTAAAGAATAAAATCAGTGTAATTTCGTCTATTCCACTGACAATTAAAATTGACTACAATCCGAAAGGTTTGAAAAATATTGACCTTAATAGTAAGTTAAATTTACAACGAGGACATGGAAGTGGAAATTTCACTGCAAACATTGAAGTTAAAGAAGTTCAAAATGCAGGACAGACATATAATATTGGGGAAACTGTCCTTACGCGATACTTGACAAGAACTTGGAAATATTTTGTGGGCACAATTGAGAAAGTCCATTTTAAAGAAAGGAAGTACACCATATCGTTTTACAAAACGTTTGGTAAAAGCGAGAATGTAAAGTTCGTACTTCCTAAGCGTAAAGATATCGATTGTGTACCGGAAGATAACCTAGTCAAATTAATTGAATTACTACAGATAAAGGAAAACCCTCCCCAGTTTGTATTATATAATGACGAAGACGCTCATTACTTCATATAA
- Protein Sequence
- MPAKYQRSTLRATAYTEHDLREAVQKVRSTELSNYAASKLYGIPTSTLNDRVLAKTGIKSQTLGRAPAIPLDQETKLAEYLRTLEKWGWGLSKEEVLDLVAAFVRRNNLKTPFKDDRPGTKWFVAFRERQNLSVKRPQAVEAVRKRMTDPFFIDEYFTLLKEVLTKYNIKDPRKIWNLDETSVSLDPSRTKVVGAIGQPCTRTTAGTGKENITVLTTVNAAGEKINPLIVFKGKHVYQEWMLEDKGTYEFELAYAASKRGWMETDIFYNYMSNHVIPNLGTERPQLMVYDGHVTHVDEKVVALAAENGLIILKLPAHTSHLLQPLDIAVFKSFKSIWDTQLVIWQRENIGVKVRKQAFARMFAEAWHKTKPEVIRNGFKKGGIYPYNPTVIPKEKFEPAAFKRWLRHKEEENAVSRKINVNTLTKLCTDVINKRMHIDLTVPTVDDADKNPNVIKLNEAKTFEELLLDKIKQQPQNKTATKLTRVAKGAEVITLTYLEKRKESEQKRSFDKPVDNEQPGPSRLCNKKTTLSKKAVKGKATGKKTRTGKNKLSITKSSDHDLNISDDSDYEKPEKELMNLGKTLQEPADIESTLETLTRKKILSNKTAKGKGIGKKTKSATNNVCSTSNPEQNNSISDNTEQNKLTSTIKMETDVNRISNNKLQIKTTNNKRQHNSKDKTSKKKRAKKVKRSRSITSTSESAAELSLCSNSEMDDSFSDIFPDNNAFFSFDGETGLLSRESQIEKIVKEIYAETEEYKNDDSKKDNISDITDNNRKENIKINETPQENTQEDEKENNIINETTQENTQEDEKENNIINETPQENTQEDEKENNIKPTSYSTLKNKISVISSIPLTIKIDYNPKGLKNIDLNSKLNLQRGHGSGNFTANIEVKEVQNAGQTYNIGETVLTRYLTRTWKYFVGTIEKVHFKERKYTISFYKTFGKSENVKFVLPKRKDIDCVPEDNLVKLIELLQIKENPPQFVLYNDEDAHYFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01217423;
- 90% Identity
- iTF_01217423;
- 80% Identity
- -