Parg007838.1
Basic Information
- Insect
- Plebejus argus
- Gene Symbol
- -
- Assembly
- GCA_905404155.1
- Location
- FR989948.1:3313664-3316588[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-09 1.3e-06 28.4 0.0 1 37 16 53 16 60 0.91 2 3 8.1 6.3e+03 -2.6 0.0 30 40 527 538 527 541 0.87 3 3 1.1 8.6e+02 0.2 0.1 20 39 876 895 875 899 0.86
Sequence Information
- Coding Sequence
- ATGCCTGCAAAATACCAGAGGAGCACACTTAGAGCGACCGCCTATACGGAACAGGACTTAAGAGAAGCGGTGCAAAAAGTTAGAAGTAAAGAACTTTCAAACTATGCCGCGTCTAAATTGTACGGGATACCGACATCTACTCTCAACGACCGTGTGTTGGCAAAAACGGGTATTAAAAGCCAAACACTAGGAAGAGCCCCAGCTATTCCTCTAGATCAGGAAACTAAGTTGGCTGAATATTTGCGCACGCTTGAAAAATGGGGTTGGGGTTTATCGAAAGAGGAAGTATTAGATTTAGTGGCAGCGTTTGTACGAAAAAATAATTTAAAAACTCCGTTCAAAGATGACAGGCCAGGCACCAAGTGGTTCGTGGCTTTTAGAGAGCGACAAAACTTATCAGTGAAGAGACCGCAAGCAGTAGAAGCCGTACGAAAACGAATGACGGATCCATTTTTTATTGACGAATACTTCACACTCTTGAAAGAAGTCCTCACAAAGTACAATATTAAAGATCCACGAAAAATATGGAATCTAGATGAAACATCCGTCTCTCTAGATCCGAGTAGGACAAAAGTTGTTGGTGCCATTGGTCAACCATGTACAAGAACGACTGCTGGTACAGGTAAAGAAAATATTACTGTCTTAACCACAGTTAACGCTGCAGGTGAGAAAATAAATCCTTTAATTGTATTTAAAGGAAAACATGTCTACCAGGAATGGATGTTGGAGGACAAAGGGACATATGAGTTTGAACTTGCTTATGCTTCAAGCAAGCGTGGATGGATGGAGACGGATATTTTTTATAATTACATGTCAAATAATGTCATTCCCAATTTAGGCACAGAGAGACCCCAACTGATGGTGTACGACGGCCATGTAACACATGTCGACGAAAAAGTAGTAGCTTTGGCAGCAAAAAATGGTTTGATCATATTAAAACTCCCTGCACACACCTCGCACCTTCTCCAGCCCTTGGATATTGCAGTATTCAAATCCTTTAAAAGTATCTGGGACACACAGCTTGTTACTTGGCAGCGCGAGAATATTGGTGTCAAAGTACGTAAGCAAGCTTTCGCTCGCATGTTTGCAGAAGCATGGCACAAGACAAAACCAGAAGTTATAAGAAACGGCTTCAAAAAGGGAGGGATCTATCCATATAATCCGACCGTCATTCCCAAAGAAAAATTTGAACCTGCTGCTTTTAAAAGATGGCTCAGACACAAAGAAGAACAAAACGCTGTCTCTAGGAAGATAAATGTTAATACTCTTACAAAACTTTGCACAGATGTCATAAATAAAAGAATGCACATCGACCTAACTGTGCCCACTGTGGATGACGCTGATAAAAATCCTAACGTCATCAAACTAAATGAAGCAAAGACTTTTGAAGAACTTCTATTAGACAAAATTAAACAACAGCCGCAAAATAAAACTGCCACAAAATTAACTCGAGTAGCCAAAGGAGCAGAAGTCATCACACTTACGTATTTAGAAAAGAGGAAAGAATCCGAACAAAAAAGATCGTTTGACAAACCTGTTGATAATGAACAACCCGGGCCATCTCGATTATGCAATAAGAAGACGACTTTAAGTAAAAAAGCAGTAAAAGGAAAGGCTACAGGAAAGAAAACAAGAACTGGAAAAAATAAACTTAGTATTACTAAAAGTTCGAATCATGACCTCAATATTTCTGACGACTCCGACTACGAAAAACCAGAAAAGGAACTAATGAATCTAGGAAAAACACTTCAAGAACCCACTGATATTGAAAGTACACTTGAAACACTAACTCGAAAAAAGATTTTGTCTAATAAAACAGCAAAAGGAAAGGGTATTGGCAAAAAAACAAAGAGCGCAACGAACAATGTCTGTTCTACTAGTAATCCAGAGCAGAATAACAGTATTTCTGATAACACAGAACAAAATAAGTTGACAAGCACTATCAAAATGGAAACAGATGTAAACAGAATTTCTAACAATAAACTACAAATTAAAACAACCAATAACAAAAGACAACACAATTCTAAGGACAAAACATCAAAGAAAAAACGGGCAAAAAAAGTAAAGAGGTCTCGAAGTATAACTTCCACATCTGAAAGTGCTGCAGAACTAAGTTTATGTAGCAACTCTGAAATGGACGACTCCTTCAGTGACATATTTCCTGACAATAATGCATTTTTTAGCTTTGATGGTGAAACAGGTTTATTATCAAGAGAATCACTGATTGAAAAAATTGTTAAAGAAATATATGCAGAAACCGAAGAATACAAAAATGATGACAGTAAAAAAGATAACATGTCCGATATAACTGATAACAATAGAAAAGAAAACATTAAAATAAATGAAACCCCACAAGAAAATACACAAGAAGACGAAAAAGAAAACAACATAATAAATGAAACCCCGCAAGAAAATACACAAGAAGACGAAAAAGAAAACAACATAAAACCAACATCATATAGCACTTTAAAGAATAAAATCAGTGTAATTTCGTCTATTCCACTGACAACTAAAATTGACTACAATCCGAAAGGTTTGAAAAATATTGACCTTAATAGTAAGTTAAATTTACAACGAGGACATGGAAGTGGAAGTTTCACTGCAAACATTGAAGTTAAAGAAGTTCAAAATGCAGGACAGACATATAATATTGGGGAAACTGTCCTTACGCGATACTTGACAAGAACTTGGAAATATTTTGTGGGCACAATTGAGAAAGTCCATTTTAAAGAAAGGAAGTACACCATATCGTTTTACAAAACGTTTGGTAAAAGCGAGAATGTAAAGTTCGTACTTCCTAAGCGTAAAGATATCGATTGTGTACCGGAAGATAACCTAGTCAAATTAATTGAATTACTACAGATAAAGGAAAACCCTCCCCAGTTTGTATTATATAATGACGAAGACGCTCATTACTTCATATAA
- Protein Sequence
- MPAKYQRSTLRATAYTEQDLREAVQKVRSKELSNYAASKLYGIPTSTLNDRVLAKTGIKSQTLGRAPAIPLDQETKLAEYLRTLEKWGWGLSKEEVLDLVAAFVRKNNLKTPFKDDRPGTKWFVAFRERQNLSVKRPQAVEAVRKRMTDPFFIDEYFTLLKEVLTKYNIKDPRKIWNLDETSVSLDPSRTKVVGAIGQPCTRTTAGTGKENITVLTTVNAAGEKINPLIVFKGKHVYQEWMLEDKGTYEFELAYASSKRGWMETDIFYNYMSNNVIPNLGTERPQLMVYDGHVTHVDEKVVALAAKNGLIILKLPAHTSHLLQPLDIAVFKSFKSIWDTQLVTWQRENIGVKVRKQAFARMFAEAWHKTKPEVIRNGFKKGGIYPYNPTVIPKEKFEPAAFKRWLRHKEEQNAVSRKINVNTLTKLCTDVINKRMHIDLTVPTVDDADKNPNVIKLNEAKTFEELLLDKIKQQPQNKTATKLTRVAKGAEVITLTYLEKRKESEQKRSFDKPVDNEQPGPSRLCNKKTTLSKKAVKGKATGKKTRTGKNKLSITKSSNHDLNISDDSDYEKPEKELMNLGKTLQEPTDIESTLETLTRKKILSNKTAKGKGIGKKTKSATNNVCSTSNPEQNNSISDNTEQNKLTSTIKMETDVNRISNNKLQIKTTNNKRQHNSKDKTSKKKRAKKVKRSRSITSTSESAAELSLCSNSEMDDSFSDIFPDNNAFFSFDGETGLLSRESLIEKIVKEIYAETEEYKNDDSKKDNMSDITDNNRKENIKINETPQENTQEDEKENNIINETPQENTQEDEKENNIKPTSYSTLKNKISVISSIPLTTKIDYNPKGLKNIDLNSKLNLQRGHGSGSFTANIEVKEVQNAGQTYNIGETVLTRYLTRTWKYFVGTIEKVHFKERKYTISFYKTFGKSENVKFVLPKRKDIDCVPEDNLVKLIELLQIKENPPQFVLYNDEDAHYFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01248044;
- 90% Identity
- iTF_01248044;
- 80% Identity
- -