Piph024555.1
Basic Information
- Insect
- Polyommatus iphigenia
- Gene Symbol
- -
- Assembly
- GCA_963422495.1
- Location
- OY730187.1:815246-815719[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-12 5e-09 36.7 0.0 2 42 15 55 14 58 0.95 2 2 8.6 4.4e+03 -1.5 0.0 7 15 56 65 55 70 0.75
Sequence Information
- Coding Sequence
- ATGTCggcaaagaaaaagaaaaggaaaTATTATTCTTGGAATGAAACTAGTATGAAACTCGCTATAGAatctttaagaaaaaaaactattgGATTAAATGAAGCGAGTCGAATCTATGGCGTTCCAAAAGCCACATTAAAAAGAAGATTGGACGGGAAAAACCAAAAAGCTATCGAAGAAGTTCAGATAGTGGGATCAGAAGGAGATCTCCCTGAAGCTTTAGAAACTGAATTAAGGTATCACATTGTTGAAATGGAGAATTCTTTGTTTGGTATTACTCCCAAAGATGTCAGAGAGCTTGCCTTCCAATTTGCTGAGAAAAATAAGATTAAAAATCGTTTTAATAAAACCAAAAAAGCTGCAGGGAAAAAATGGTACTATGCATTCATGAAGCGCCATCCAGATATAAGTCTCCGTCAACCAAGAGCCACATCTATGAGCAGGGCAACTGGATTTAATAAGGAGACGGTATAA
- Protein Sequence
- MSAKKKKRKYYSWNETSMKLAIESLRKKTIGLNEASRIYGVPKATLKRRLDGKNQKAIEEVQIVGSEGDLPEALETELRYHIVEMENSLFGITPKDVRELAFQFAEKNKIKNRFNKTKKAAGKKWYYAFMKRHPDISLRQPRATSMSRATGFNKETV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00403698; iTF_00403703; iTF_00404670;
- 90% Identity
- iTF_00403703;
- 80% Identity
- -