Piph033018.1
Basic Information
- Insect
- Polyommatus iphigenia
- Gene Symbol
- -
- Assembly
- GCA_963422495.1
- Location
- OY730190.1:19338787-19347228[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.8e-09 3.5e-06 27.6 0.0 2 39 269 307 268 311 0.90 2 4 5.9e-12 3.1e-09 37.4 0.1 1 39 322 360 322 363 0.94 3 4 4.3e-14 2.2e-11 44.3 0.3 2 45 378 421 377 421 0.96 4 4 1.3e-16 6.5e-14 52.4 0.0 2 40 429 468 428 470 0.93
Sequence Information
- Coding Sequence
- ATGCGCTCACCTATAACCGTACACACTGACCTTAGAGCTATTGTGTCCCAACAAAATTTCGTTCCCCAGATTACGCCTTACCTGAAAGAGTTTGCGCGGATTTTGCTTGATGTTAAGCACCGGGTTGAAGAGCAACAAGATCTTCGAAAGGCCAGTGGTGATAGTAAGCGACGAGACAGTCCTTCGTTTGCAGAAGGGGACCTGGTCCTCGTGGATGCCCATCTGATGAGCAATGCAGCCAAGGGGTTTACCAGTAAATTTGCCCCAAAACGGGAAGGCCCCTATCGTGTCTCTCATATTGTGAGTCCCACGTCATTTATTGTCGAGGATGCGAACGGAGTTGTTCGAGGCAAGTACCATGCCAGCGCCCTCACTCCATATggTACCCTGGAAGAGCTAGCGCCTGCGCCGGCGGGGCCCGCCGCGACGCCGGTGAAGGAGCACCTCCCGTCACCGACGGAGGCGTCGTTGGCGACCCTGCAGCCTGCACCCGTAGGAAATACCATGGGTAGTTCAATAATCGACATGCACGCGAAGATGATGAGCGTGACGGAAGTGGCCGACTCCAGGGACTTCGTGCCGCTCATGCCGGTCAAGGATGAGCTGTCCGAGAGTGAACATAATTTAGCTTCCGTCTATCTGCACATTTTCCACCTCAAAAGCAGCTTGACTGTGCAGCTTGCCGAGTACTTTTGTAAGTTAACCCAGCTGGATACGATTTCAGAGCAGCAACAGAGCAGCGACGACACCAGCGACTCCGCCCCGGAGCAGGCGGTGGGCCGCGGGAGCCCCAAGGCGTGGTCGCCCCAGGACATGGACAGCGCGCTCGACGCGCTCCGGACACACAACATGACTCTCACTAAGGCGTCAGCGACGTTCGGCATCCCGTCAACAACGCTGTGGCAGCGCGCGCACCGCCTCGGCATAGACACGCCGAAGAAAGATGCCGCGTCCAAATCCTGGAGCGAGGATGACCTGAAGGCGGCATTGGACGCACTGCGCGCCGGCACCATCTCCGCTAACAAAGCTAGCAAAGCTTATGGCATCCCCAGCAGCACTCTGTACAAGATAGCGCGGCGCGAGGGCATCCGTCTGGCGGCGCCGTTCAACGCCGCGCCCACCGCGTGGCGGCGCGCCGACCTCGCACGCGCGCTCGCCGCCGTGCGTGCGGGCGCCGCCGTGCAACGTGCCGCGTCGCACTATGGTATACCCACAGGAACTCTATACGGACGGTGCAAGCGAGAGGGAATAGAGCTGTCTCGCTCTAACCCGACGCCGTGGTCGGAAGGCGCTATGGAGGAGGCGTTGGAAGCTGTCAGGGTGGGTCAGATGTCGATCAACCAGGCGGCCATCCACTTCAACCTGCCGTACTCGTCGCTGTACGGCCGCTTCAAGCGCTGCAAGGTCCAGCCGCCGCAGGGCATCCAAACTTCAAGTCACATGGAGTTCTCTGAACAGATGGATCATCAGTTCTCTCCGGACATGATATCCGGCTTGGACGACATACACCGGACATATACCCTGGCGGATGTCCTAGACATACAGTCGTGCACACAAGAGTCAAACGATGAGTACACCGTACAGCCGCGAACACAAGCGGAACATAGCGTATCGTATGTACATTCGCGATCACCAGACGCCATAGATAAAAGGCAGGTCCATCAAGAGGTACAATCAAACACTGAGCTGCAATCTGCACACGCACCTGTACAATCACGACCACAAGCGGAGCTAGGATCGTATGTACAGACGCGAACAATTGAATCCATAGATATGCGACGAGACGTACAGCGAGAGTTTCAGTCGAGCGAAGGACGTCTACAAATAGCGCAGGGCCCTGTACAGTCGCGGCCACAAGTGCATTCACTGGTTAACTCGTACGTACAGTCGCGAACTATTCAGTCCATTgataagcgacaagacttacaGCGAGACTTTCAGTCGAGTGAAGGGCGTCTACAAACTACGCCTGTACAGTCGCGACCACAAGTGCATTCACTAGTACAGTCGCGAAGTATTCAGCCCATTGACAAGCGACACGACGAGCAGGTATATTCGGGTGCAGAAGTGCGGGCGTTTAGCGGCGTGCGTCAAGCTCTGTACGCGCTCGAGCCTTGCGGCCCCGCCTACTGCATCGCCAGCTGA
- Protein Sequence
- MRSPITVHTDLRAIVSQQNFVPQITPYLKEFARILLDVKHRVEEQQDLRKASGDSKRRDSPSFAEGDLVLVDAHLMSNAAKGFTSKFAPKREGPYRVSHIVSPTSFIVEDANGVVRGKYHASALTPYGTLEELAPAPAGPAATPVKEHLPSPTEASLATLQPAPVGNTMGSSIIDMHAKMMSVTEVADSRDFVPLMPVKDELSESEHNLASVYLHIFHLKSSLTVQLAEYFCKLTQLDTISEQQQSSDDTSDSAPEQAVGRGSPKAWSPQDMDSALDALRTHNMTLTKASATFGIPSTTLWQRAHRLGIDTPKKDAASKSWSEDDLKAALDALRAGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLARALAAVRAGAAVQRAASHYGIPTGTLYGRCKREGIELSRSNPTPWSEGAMEEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKVQPPQGIQTSSHMEFSEQMDHQFSPDMISGLDDIHRTYTLADVLDIQSCTQESNDEYTVQPRTQAEHSVSYVHSRSPDAIDKRQVHQEVQSNTELQSAHAPVQSRPQAELGSYVQTRTIESIDMRRDVQREFQSSEGRLQIAQGPVQSRPQVHSLVNSYVQSRTIQSIDKRQDLQRDFQSSEGRLQTTPVQSRPQVHSLVQSRSIQPIDKRHDEQVYSGAEVRAFSGVRQALYALEPCGPAYCIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00933649;
- 90% Identity
- -
- 80% Identity
- -